##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547324_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1886399 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296078401229007 31.0 31.0 33.0 30.0 34.0 2 31.721622519944084 31.0 31.0 34.0 30.0 34.0 3 31.846754583733347 31.0 31.0 34.0 30.0 34.0 4 35.622194986320494 37.0 35.0 37.0 33.0 37.0 5 35.49820425053236 37.0 35.0 37.0 33.0 37.0 6 35.53065814814363 37.0 35.0 37.0 33.0 37.0 7 35.90576967014932 37.0 35.0 37.0 35.0 37.0 8 35.8892805816797 37.0 35.0 37.0 35.0 37.0 9 37.614028103280376 39.0 37.0 39.0 35.0 39.0 10 36.91399221479655 39.0 37.0 39.0 32.0 39.0 11 36.65321917579473 39.0 35.0 39.0 32.0 39.0 12 36.265790005189785 38.0 35.0 39.0 32.0 39.0 13 36.06592613757747 38.0 35.0 39.0 31.0 39.0 14 37.094361797265584 39.0 35.0 41.0 31.0 41.0 15 37.261941402640694 39.0 35.0 41.0 32.0 41.0 16 37.35518996776398 39.0 35.0 41.0 32.0 41.0 17 37.28654595342767 39.0 35.0 41.0 32.0 41.0 18 37.165128374219876 39.0 35.0 41.0 32.0 41.0 19 37.10534409740463 39.0 35.0 41.0 32.0 41.0 20 36.94486479265521 39.0 35.0 41.0 31.0 41.0 21 36.804867368992454 38.0 35.0 41.0 31.0 41.0 22 36.74764564654667 38.0 35.0 40.0 31.0 41.0 23 36.68655676768277 38.0 35.0 40.0 31.0 41.0 24 36.53562793449318 38.0 35.0 40.0 31.0 41.0 25 36.45458887541819 38.0 35.0 40.0 31.0 41.0 26 36.34043328055199 38.0 35.0 40.0 30.0 41.0 27 36.257891358084905 38.0 35.0 40.0 30.0 41.0 28 36.32912337209678 38.0 35.0 40.0 30.0 41.0 29 36.33510089859038 38.0 35.0 40.0 30.0 41.0 30 36.27113776035717 38.0 35.0 40.0 30.0 41.0 31 36.15840763274365 38.0 35.0 40.0 30.0 41.0 32 36.06955898513517 38.0 35.0 40.0 30.0 41.0 33 35.882374831623636 38.0 35.0 40.0 29.0 41.0 34 35.65395072834538 38.0 34.0 40.0 28.0 41.0 35 35.51467266469077 38.0 34.0 40.0 27.0 41.0 36 35.3752853982641 38.0 34.0 40.0 27.0 41.0 37 35.27002081744106 38.0 34.0 40.0 26.0 41.0 38 35.21619445302929 38.0 34.0 40.0 26.0 41.0 39 35.17447952421519 38.0 34.0 40.0 26.0 41.0 40 35.00727470699465 38.0 34.0 40.0 25.0 41.0 41 34.9220954845714 38.0 34.0 40.0 24.0 41.0 42 34.86698890319598 38.0 34.0 40.0 24.0 41.0 43 34.820411800472755 37.0 34.0 40.0 24.0 41.0 44 34.702746873805594 37.0 34.0 40.0 24.0 41.0 45 34.59232961849534 37.0 33.0 40.0 24.0 41.0 46 34.527925428289564 37.0 33.0 40.0 24.0 41.0 47 34.38381222636357 37.0 33.0 40.0 23.0 41.0 48 34.338472401649916 37.0 33.0 40.0 23.0 41.0 49 34.22947584259746 36.0 33.0 40.0 24.0 41.0 50 34.13481718342726 36.0 33.0 40.0 23.0 41.0 51 33.676981380927366 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 7.0 12 5.0 13 8.0 14 27.0 15 72.0 16 193.0 17 434.0 18 962.0 19 1855.0 20 2979.0 21 4733.0 22 7173.0 23 10590.0 24 14862.0 25 21351.0 26 28303.0 27 34647.0 28 38288.0 29 43551.0 30 50662.0 31 61210.0 32 74670.0 33 95480.0 34 146205.0 35 191832.0 36 151740.0 37 189336.0 38 277670.0 39 437452.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.227327304562824 24.041997477734032 29.507596219039556 16.223078998663592 2 29.354977393435856 26.173094875474384 31.600896734996148 12.871030996093616 3 28.250386053003634 25.829212165612898 32.96836989417403 12.95203188720944 4 25.651201044953904 27.76321446311199 32.180678636916156 14.404905855017947 5 22.830747895858725 31.351320690903673 31.701087627803027 14.116843785434577 6 21.31532088386391 40.58425603491096 27.93804492050727 10.162378160717854 7 88.57124076083586 3.112385025649399 6.8107542465830395 1.5056199669317043 8 89.63681596523323 2.4851582300457116 6.436125125172352 1.4419006795487064 9 85.49045032360598 4.637460049544131 7.817752235873747 2.05433739097614 10 39.449872481908656 32.36992810110693 15.28685076699044 12.893348649993982 11 31.7815584083749 24.990736318244444 26.244500765744682 16.98320450763598 12 30.89023053977446 22.373315507482776 28.460044773136545 18.276409179606222 13 24.428236020057263 27.20659839196268 29.04830844375978 19.316857144220283 14 19.233788821983048 31.042425276943003 30.559070482967815 19.164715418106137 15 18.444136155712552 26.525777420365472 37.34771911986807 17.682367304053916 16 22.822372149264286 24.970698139683066 34.511945776052684 17.694983934999968 17 23.19175317628985 24.967305432201776 27.9048069894015 23.93613440210687 18 23.37103656225433 26.664295305500058 31.08668950736297 18.877978624882648 19 26.385033070946285 27.295444919128986 26.846388277347476 19.473133732577256 20 27.563733865422957 26.86997819655333 27.100417250009144 18.465870688014572 21 25.18571097630989 26.39738464662036 30.883710180083852 17.533194196985896 22 24.58355840943512 22.486335075453283 30.505423295919897 22.4246832191917 23 21.9282346947809 26.208294215592776 30.305624631904493 21.55784645772183 24 21.11112230233371 25.79523207974559 33.678028879362216 19.41561673855849 25 22.0820197635813 26.72398575274902 30.728970912304344 20.465023571365336 26 20.325445465142845 30.337007176106432 27.669278874723744 21.668268484026974 27 19.776250941608854 29.933327996887193 30.223351475483184 20.06706958602077 28 18.60359340733323 28.559546522236285 33.54067723742432 19.296182833006167 29 20.440691497397953 27.046929096124416 32.065856693096215 20.44652271338142 30 20.680195441155345 28.491109251012116 31.23300001749365 19.595695290338895 31 24.764697182303426 27.093525812937774 27.901520304029 20.2402567007298 32 25.89107606609206 26.890546485658657 27.634503623040512 19.58387382520877 33 24.450023563413676 27.12814203145782 27.872046157785284 20.54978824734322 34 21.53118189736106 27.800534245406194 29.465823508176157 21.20246034905659 35 21.596756571647884 27.04173401279369 29.81251580392059 21.548993611637833 36 25.397119061237838 26.870455296042884 28.162917813251596 19.56950782946768 37 20.999799088103842 29.64065396557144 28.977856752468593 20.381690193856127 38 22.429348191978473 29.530443983483877 26.68544671620373 21.354761108333918 39 21.716667576689765 28.308168102294374 28.4088891056452 21.566275215370663 40 22.838858587181186 26.89065250776744 28.714020734743816 21.556468170307554 41 20.1985370009208 25.895369961498073 29.999750848044343 23.906342189536783 42 21.9908407500216 26.789348382818268 28.087695127064848 23.132115740095283 43 21.080481912893294 27.009609313830214 29.123531129946528 22.786377643329963 44 21.73771296528465 27.62061472678898 28.692180180333004 21.949492127593366 45 20.8904372828866 30.228281503541933 27.17590499146787 21.705376222103595 46 22.135985016955587 28.30838014651195 28.258443733271697 21.29719110326076 47 21.94890900599502 27.785691150175545 28.55594177053741 21.709458073292023 48 21.39913136086268 27.426859322974618 29.6202447096293 21.553764606533402 49 21.77922062087607 26.465503851518157 29.793325802229536 21.961949725376233 50 21.179559573557874 28.329796612487602 28.986497554335006 21.50414625961952 51 20.74184729741693 29.41440278541284 28.27084832000017 21.57290159717006 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2758.0 1 3140.5 2 3523.0 3 14346.0 4 25169.0 5 16994.5 6 8820.0 7 9105.5 8 9391.0 9 10060.5 10 10730.0 11 10970.0 12 11210.0 13 10931.5 14 10653.0 15 9918.5 16 9184.0 17 8645.5 18 8107.0 19 7952.5 20 7798.0 21 8481.5 22 9165.0 23 10015.5 24 10866.0 25 11610.0 26 15533.0 27 18712.0 28 21796.0 29 24880.0 30 30760.0 31 36640.0 32 42593.0 33 48546.0 34 53409.5 35 58273.0 36 63748.5 37 69224.0 38 73285.5 39 77347.0 40 91094.0 41 104841.0 42 119031.5 43 133222.0 44 136946.0 45 140670.0 46 142440.5 47 144211.0 48 149686.0 49 155161.0 50 145921.5 51 136682.0 52 130435.0 53 124188.0 54 114734.0 55 105280.0 56 98865.0 57 92450.0 58 85490.0 59 78530.0 60 70174.5 61 61819.0 62 55448.5 63 49078.0 64 39901.5 65 30725.0 66 25099.0 67 19473.0 68 16577.5 69 13682.0 70 11189.5 71 8697.0 72 7714.5 73 6732.0 74 5171.5 75 2673.0 76 1735.0 77 1286.0 78 837.0 79 777.5 80 718.0 81 561.5 82 405.0 83 282.5 84 160.0 85 118.5 86 77.0 87 51.5 88 26.0 89 24.0 90 22.0 91 15.5 92 9.0 93 6.5 94 4.0 95 3.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1886399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.921315389464578 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02204469333296 16.339870212246453 2 6.595219756209135 2.627709056525397 3 2.1497241022926197 1.2847599552631466 4 1.078623658252572 0.8595040833035018 5 0.7082632154953514 0.7054767447319605 6 0.5009730381601343 0.5988025136883784 7 0.39429180006277403 0.5498367913171162 8 0.30738937920963333 0.48988806164854654 9 0.27613725184045246 0.4950915556224294 >10 3.1711765782203 15.473170938300434 >50 1.4960180803759373 21.83486098156806 >100 1.2950681200944372 37.01550079769279 >500 0.0034691707315163615 0.40955912519376503 >1k 0.0013342964351986007 0.43518315145848396 >5k 0.0 0.0 >10k+ 2.6685928703972016E-4 0.8807860314395508 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16568 0.8782871492192267 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2110 0.11185332477381509 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.301105439517302E-5 0.0 0.0 0.03525235117279006 0.0 2 5.301105439517302E-5 0.0 0.0 0.1092557831084516 0.0 3 5.301105439517302E-5 0.0 0.0 0.15728379839047837 0.0 4 5.301105439517302E-5 0.0 0.0 0.26065535446106575 0.0 5 5.301105439517302E-5 0.0 0.0 0.4563721672880446 0.0 6 5.301105439517302E-5 0.0 0.0 0.7240779919836684 0.0 7 5.301105439517302E-5 0.0 0.0 0.8667837504154742 0.0 8 5.301105439517302E-5 0.0 0.0 1.1282342706924675 0.0 9 5.301105439517302E-5 0.0 0.0 1.2327720699597486 0.0 10 5.301105439517302E-5 0.0 0.0 1.411472334325877 0.0 11 5.301105439517302E-5 0.0 0.0 1.638147602919637 0.0 12 5.301105439517302E-5 0.0 0.0 1.8335463494202446 0.0 13 5.301105439517302E-5 0.0 0.0 1.9156074616239724 0.0 14 5.301105439517302E-5 0.0 0.0 1.9487393706209555 0.0 15 5.301105439517302E-5 0.0 0.0 1.9901410041035856 0.0 16 5.301105439517302E-5 0.0 0.0 2.0760719232781613 0.0 17 5.301105439517302E-5 0.0 0.0 2.180450689382257 0.0 18 5.301105439517302E-5 0.0 0.0 2.31165304901031 0.0 19 5.301105439517302E-5 0.0 0.0 2.3901624205695615 0.0 20 5.301105439517302E-5 0.0 0.0 2.480811323585307 0.0 21 5.301105439517302E-5 0.0 0.0 2.5946260573717437 0.0 22 5.301105439517302E-5 0.0 0.0 2.715120184011972 0.0 23 5.301105439517302E-5 0.0 0.0 2.8415515487444596 0.0 24 5.301105439517302E-5 0.0 0.0 2.9380316677436746 0.0 25 5.301105439517302E-5 0.0 0.0 3.024757752734178 0.0 26 5.301105439517302E-5 0.0 0.0 3.1040092790549614 0.0 27 5.301105439517302E-5 0.0 0.0 3.1946581820707074 0.0 28 5.301105439517302E-5 0.0 0.0 3.285943217739195 0.0 29 5.301105439517302E-5 0.0 0.0 3.3972664319690584 0.0 30 1.0602210879034604E-4 0.0 0.0 3.529847079011386 0.0 31 1.0602210879034604E-4 0.0 0.0 3.640110072153346 0.0 32 1.0602210879034604E-4 0.0 0.0 3.746609280433249 0.0 33 1.0602210879034604E-4 0.0 0.0 3.8577734614999266 0.0 34 1.0602210879034604E-4 0.0 0.0 3.9707930294704354 0.0 35 1.0602210879034604E-4 0.0 0.0 4.10867478195228 0.0 36 1.0602210879034604E-4 0.0 0.0 4.22498103529529 0.0 37 1.0602210879034604E-4 0.0 0.0 4.345210106663543 0.0 38 1.0602210879034604E-4 0.0 0.0 4.487173710333816 0.0 39 1.0602210879034604E-4 0.0 0.0 4.728533040995039 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCTTA 30 2.1662454E-6 45.000004 40 ACGATAA 25 3.8917606E-5 45.0 10 CCGTAGA 20 7.034439E-4 45.0 19 TCGAGTA 45 3.8562575E-10 45.0 27 CGCGTAT 20 7.034439E-4 45.0 26 CGACTAG 20 7.034439E-4 45.0 26 TAGTACG 55 1.8189894E-12 45.0 1 ACGCGTA 20 7.034439E-4 45.0 25 TATAGCG 130 0.0 44.999996 1 TACGCGG 165 0.0 43.636364 2 ATATGCG 100 0.0 42.75 1 CGTTTTT 7440 0.0 42.308468 1 CGGTCTA 410 0.0 41.707317 31 GGCGATA 560 0.0 41.383926 8 TAACGCC 240 0.0 41.250004 12 ATAACGC 240 0.0 41.250004 11 TCTCACG 445 0.0 40.955055 23 CGGGTTA 110 0.0 40.909092 6 CGAGTAC 50 1.0822987E-9 40.5 28 ATATCGG 50 1.0822987E-9 40.5 2 >>END_MODULE