##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547323_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1150538 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296762905701506 31.0 31.0 33.0 30.0 34.0 2 31.724617526757047 31.0 31.0 34.0 30.0 34.0 3 31.860664315302927 31.0 31.0 34.0 30.0 34.0 4 35.63600159229856 37.0 35.0 37.0 33.0 37.0 5 35.51237508017988 37.0 35.0 37.0 33.0 37.0 6 35.549155264754404 37.0 35.0 37.0 33.0 37.0 7 35.91765852149168 37.0 35.0 37.0 35.0 37.0 8 35.89433551955694 37.0 35.0 37.0 35.0 37.0 9 37.631694042265444 39.0 37.0 39.0 35.0 39.0 10 36.92287434226423 39.0 37.0 39.0 32.0 39.0 11 36.696290778748725 39.0 35.0 39.0 32.0 39.0 12 36.37279776939136 38.0 35.0 39.0 32.0 39.0 13 36.22760047908022 39.0 35.0 39.0 32.0 39.0 14 37.256940666018856 39.0 36.0 41.0 32.0 41.0 15 37.382413271008865 39.0 36.0 41.0 32.0 41.0 16 37.43070111547815 39.0 36.0 41.0 32.0 41.0 17 37.34724450648305 39.0 35.0 41.0 32.0 41.0 18 37.244350034505594 39.0 36.0 41.0 32.0 41.0 19 37.217479996314765 39.0 35.0 41.0 32.0 41.0 20 37.08860376623806 39.0 35.0 41.0 31.0 41.0 21 36.98709125643829 39.0 35.0 41.0 31.0 41.0 22 36.89644236000897 39.0 35.0 41.0 31.0 41.0 23 36.81828935680525 39.0 35.0 41.0 31.0 41.0 24 36.681309091920475 38.0 35.0 40.0 31.0 41.0 25 36.58297596428801 38.0 35.0 40.0 31.0 41.0 26 36.48192497770608 38.0 35.0 40.0 30.0 41.0 27 36.41488155975726 38.0 35.0 40.0 30.0 41.0 28 36.48689569575277 38.0 35.0 40.0 30.0 41.0 29 36.50816574506883 38.0 35.0 40.0 30.0 41.0 30 36.46396468434767 38.0 35.0 40.0 30.0 41.0 31 36.37359044203668 38.0 35.0 40.0 30.0 41.0 32 36.2901016741733 38.0 35.0 40.0 30.0 41.0 33 36.13382434999974 38.0 35.0 40.0 30.0 41.0 34 35.93078629302118 38.0 35.0 40.0 29.0 41.0 35 35.7961631862659 38.0 35.0 40.0 28.0 41.0 36 35.66748164771611 38.0 34.0 40.0 27.0 41.0 37 35.59987675331019 38.0 34.0 40.0 27.0 41.0 38 35.49909955168799 38.0 34.0 40.0 27.0 41.0 39 35.45781451807763 38.0 34.0 40.0 27.0 41.0 40 35.30182401624283 38.0 34.0 40.0 26.0 41.0 41 35.205609028124236 38.0 34.0 40.0 26.0 41.0 42 35.13017214555278 38.0 34.0 40.0 26.0 41.0 43 35.09972899634779 38.0 34.0 40.0 26.0 41.0 44 34.987545826387304 38.0 34.0 40.0 25.0 41.0 45 34.870747424248485 38.0 34.0 40.0 25.0 41.0 46 34.79703321402683 37.0 34.0 40.0 24.0 41.0 47 34.654961418049645 37.0 33.0 40.0 24.0 41.0 48 34.59267838176575 37.0 33.0 40.0 24.0 41.0 49 34.47350804580118 37.0 33.0 40.0 24.0 41.0 50 34.392963118123866 37.0 33.0 40.0 24.0 41.0 51 33.949538389866305 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 4.0 13 9.0 14 24.0 15 38.0 16 96.0 17 249.0 18 453.0 19 945.0 20 1618.0 21 2636.0 22 3906.0 23 5736.0 24 8277.0 25 12077.0 26 16242.0 27 19881.0 28 22142.0 29 25151.0 30 30222.0 31 36332.0 32 44619.0 33 56909.0 34 84873.0 35 105602.0 36 94111.0 37 119964.0 38 179192.0 39 279160.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.40669843151639 23.253121583120244 30.440541729173653 14.899638256189712 2 31.02070509622455 25.460349853720608 30.28044271462568 13.238502335429164 3 28.19281066770502 25.940299233923607 32.577541984706286 13.289348113665087 4 25.02872569180679 28.475808708621532 32.3569495314366 14.138516068135083 5 22.70068437548347 32.72156156511128 30.63471176093271 13.943042298472541 6 20.377771094913857 41.081737413279704 27.957007938894673 10.583483552911769 7 89.46336409575346 3.0328420269473932 6.013099958454219 1.4906939188449229 8 90.70600014949528 2.4407711870446698 5.458402938451402 1.3948257250086482 9 86.64216218847183 4.390380847916366 6.762488505377484 2.2049684582343216 10 38.0932224750508 31.87039454585594 15.728554815225573 14.307828163867686 11 30.970815392451183 26.429548611171473 24.586150131503697 18.01348586487365 12 30.071583902487358 22.799942287868806 27.620817391515967 19.507656418127866 13 25.052366805789987 25.198385450980325 28.52500308551304 21.22424465771665 14 20.455560789821806 29.106644022187883 29.276912192383044 21.16088299560727 15 21.003043793425334 27.376409992542623 33.089302569754324 18.53124364427772 16 24.624306194145696 25.583248880089144 31.802860922455405 17.989584003309755 17 24.693665050611106 25.992361834202782 27.217440884177662 22.09653223100845 18 24.804830435848274 27.339210004363174 28.787662815135178 19.06829674465337 19 26.504991577853144 28.06826023999207 26.02313004872503 19.403618133429752 20 27.77552762272954 27.842539750968676 26.285702862486943 18.09622976381484 21 27.238213774773197 26.593732671150367 28.21766860373147 17.95038495034497 22 24.976228512226452 23.65649809045855 29.511845762591065 21.855427634723927 23 24.033539092146455 26.498646720056186 28.625999315103023 20.84181487269434 24 23.247993547366537 26.340720602014013 30.559181878390806 19.852103972228644 25 23.69830461923031 26.906108272825406 28.27181718465622 21.12376992328806 26 22.240551811413443 29.64665226181143 26.22903372161545 21.883762205159673 27 21.362440875486076 28.80313383825654 29.27856359372746 20.555861692529927 28 19.61343302003063 29.16896269397447 30.412815569759537 20.80478871623536 29 21.36218012790538 27.69495662029416 29.809184920445915 21.13367833135455 30 22.386483540743548 27.09428111022843 29.77389708119158 20.745338267836438 31 24.89409302430689 26.813369049957497 27.413870728302758 20.878667197432854 32 25.137283601236987 26.966514795686887 27.755189311435174 20.14101229164095 33 24.32488105564527 27.25342405031385 26.907064347287964 21.51463054675291 34 21.61362771155755 27.77526687514884 29.205815018712983 21.40529039458062 35 21.56504174568767 27.567798716774238 28.947674913822922 21.919484623715167 36 24.007551249936988 29.013817883459737 26.99267646961682 19.985954396986454 37 22.881990859928138 29.22780473135177 27.19988388041073 20.690320528309364 38 22.74996566823521 29.45526353757981 26.269449596623495 21.52532119756149 39 22.425421846127637 28.137706012317715 26.981203576066154 22.455668565488494 40 23.892213903408667 26.46561869316789 28.0194135265415 21.622753876881944 41 21.17044374023283 26.76756439161505 28.562203073692483 23.499788794459636 42 22.357540559286175 28.001335027613166 27.04821570430529 22.592908708795363 43 22.178059307906388 27.114445589802337 27.481838931004454 23.225656171286822 44 22.51303303324184 27.606302442857167 27.34555486216014 22.535109661740854 45 21.917050979628662 28.360645193813678 26.913061541643994 22.809242284913665 46 22.854699279815183 28.052093889988853 26.768433550217374 22.324773279978587 47 22.40369288106955 27.97282662545696 27.5187781716032 22.10470232187029 48 22.032996737178607 27.486793135037697 28.623218007575584 21.856992120208112 49 22.40021624666026 27.155209128251308 28.353518093274626 22.091056531813813 50 21.319852103972227 27.616123935063424 28.942720709789683 22.121303251174666 51 20.641908394159948 28.694662844686576 27.59934917403858 23.064079587114897 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1105.0 1 1319.5 2 1534.0 3 6667.5 4 11801.0 5 8153.0 6 4505.0 7 4546.5 8 4588.0 9 4869.0 10 5150.0 11 5248.0 12 5346.0 13 5201.5 14 5057.0 15 4816.5 16 4576.0 17 4366.0 18 4156.0 19 4148.5 20 4141.0 21 4424.5 22 4708.0 23 5131.0 24 5554.0 25 6477.5 26 9331.5 27 11262.0 28 12863.0 29 14464.0 30 16484.5 31 18505.0 32 22945.0 33 27385.0 34 30073.5 35 32762.0 36 36105.0 37 39448.0 38 44671.5 39 49895.0 40 53580.5 41 57266.0 42 64278.0 43 71290.0 44 75720.0 45 80150.0 46 86126.5 47 92103.0 48 93634.0 49 95165.0 50 91378.5 51 87592.0 52 83603.0 53 79614.0 54 75831.0 55 72048.0 56 67713.0 57 63378.0 58 59692.0 59 56006.0 60 50644.0 61 45282.0 62 38713.0 63 32144.0 64 26134.5 65 20125.0 66 16295.5 67 12466.0 68 10894.5 69 9323.0 70 7340.5 71 5358.0 72 4427.5 73 3497.0 74 2827.5 75 1632.0 76 1106.0 77 842.5 78 579.0 79 463.5 80 348.0 81 213.5 82 79.0 83 53.0 84 27.0 85 40.5 86 54.0 87 36.5 88 19.0 89 14.5 90 10.0 91 7.0 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1150538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.834361383499783 #Duplication Level Percentage of deduplicated Percentage of total 1 77.36178705793448 18.43868790012167 2 5.84892631831255 2.788108471522484 3 2.272118892749108 1.6246350838817887 4 1.377225647181732 1.3130117512621509 5 0.9858829303441716 1.1748945021823367 6 0.7831644333605366 1.1199734476451317 7 0.6621397132264297 1.1047174047983948 8 0.5764800858754924 1.099202775771798 9 0.49391478977573916 1.0594929232953263 >10 8.315796495827984 48.30775426535176 >50 1.2720198067997404 19.231668214927005 >100 0.04798001121870651 1.7265332321924804 >500 0.0018312981381185074 0.29645600447595954 >1k 3.662596276237015E-4 0.10231049388864093 >5k 3.662596276237015E-4 0.6125535286831001 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7017 0.6098885912503541 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1172 0.10186538819230656 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.691586023234348E-5 0.0 0.0 0.02581401048900601 0.0 2 8.691586023234348E-5 0.0 0.0 0.07961492797282663 0.0 3 8.691586023234348E-5 0.0 0.0 0.12246444706737196 0.0 4 8.691586023234348E-5 0.0 0.0 0.20477376670740124 0.0 5 8.691586023234348E-5 0.0 0.0 0.3690447425465304 0.0 6 8.691586023234348E-5 0.0 0.0 0.6869829592764428 0.0 7 8.691586023234348E-5 0.0 0.0 0.8606408480206651 0.0 8 8.691586023234348E-5 0.0 0.0 1.1681491615226964 0.0 9 8.691586023234348E-5 0.0 0.0 1.3245107940806822 0.0 10 8.691586023234348E-5 0.0 0.0 1.5607481021921918 0.0 11 8.691586023234348E-5 0.0 0.0 1.7839480312688498 0.0 12 8.691586023234348E-5 0.0 0.0 1.9620386288849216 0.0 13 8.691586023234348E-5 0.0 0.0 2.0503451428809827 0.0 14 8.691586023234348E-5 0.0 0.0 2.102842322461318 0.0 15 8.691586023234348E-5 0.0 0.0 2.156556324084906 0.0 16 8.691586023234348E-5 0.0 0.0 2.23790956926238 0.0 17 8.691586023234348E-5 0.0 0.0 2.332647856915634 0.0 18 8.691586023234348E-5 0.0 0.0 2.454330061240915 0.0 19 8.691586023234348E-5 0.0 0.0 2.53907302496745 0.0 20 8.691586023234348E-5 0.0 0.0 2.627379538963511 0.0 21 8.691586023234348E-5 0.0 0.0 2.7415869793088103 0.0 22 8.691586023234348E-5 0.0 0.0 2.871091611055002 0.0 23 8.691586023234348E-5 0.0 0.0 3.0035513820490936 0.0 24 8.691586023234348E-5 0.0 0.0 3.1086326570699967 0.0 25 8.691586023234348E-5 0.0 0.0 3.203110197142554 0.0 26 8.691586023234348E-5 0.0 0.0 3.2958494200104647 0.0 27 8.691586023234348E-5 0.0 0.0 3.400148452289277 0.0 28 8.691586023234348E-5 0.0 0.0 3.5054904748908773 0.0 29 8.691586023234348E-5 0.0 0.0 3.627954921958249 0.0 30 8.691586023234348E-5 0.0 0.0 3.763630579780937 0.0 31 8.691586023234348E-5 0.0 0.0 3.8767950298034486 0.0 32 8.691586023234348E-5 0.0 0.0 4.007951062894055 0.0 33 8.691586023234348E-5 0.0 0.0 4.124418315605395 0.0 34 8.691586023234348E-5 0.0 0.0 4.250098649501363 0.0 35 8.691586023234348E-5 0.0 0.0 4.38012477640895 0.0 36 8.691586023234348E-5 0.0 0.0 4.498504178045401 0.0 37 8.691586023234348E-5 0.0 0.0 4.637134975115989 0.0 38 8.691586023234348E-5 0.0 0.0 4.8059255756872 0.0 39 8.691586023234348E-5 0.0 0.0 5.102047911498794 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 35 1.211938E-7 45.0 1 GTATGCG 55 1.8189894E-12 45.0 1 ATAACGC 75 0.0 45.0 11 CGTTTTT 4045 0.0 42.88628 1 CACGACG 190 0.0 42.63158 26 CGGTCTA 185 0.0 42.567566 31 CGACGGT 195 0.0 41.53846 28 TCACGAC 200 0.0 40.5 25 ACGGGCC 95 0.0 40.263157 5 CGGGATA 225 0.0 40.000004 6 TAGGGCG 440 0.0 38.863636 5 TACGGGA 285 0.0 38.68421 4 TAATGCG 35 6.248296E-6 38.571426 1 TGCGGGA 695 0.0 38.52518 4 ATAGGGC 655 0.0 38.473286 4 GCGCGAC 195 0.0 38.076923 9 GGGCGAT 1490 0.0 37.902687 7 ACGGTCT 220 0.0 37.840908 30 TAGGGAC 940 0.0 37.81915 5 GTAGGGA 1400 0.0 37.76786 4 >>END_MODULE