##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547321_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 825617 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34556701230716 31.0 31.0 33.0 30.0 34.0 2 31.752383974651686 31.0 31.0 34.0 30.0 34.0 3 31.831471493440663 31.0 31.0 34.0 30.0 34.0 4 35.61589090340921 37.0 35.0 37.0 33.0 37.0 5 35.52364231841156 37.0 35.0 37.0 33.0 37.0 6 35.55747156369115 37.0 35.0 37.0 33.0 37.0 7 35.88712683968475 37.0 35.0 37.0 35.0 37.0 8 35.86976164492737 37.0 35.0 37.0 35.0 37.0 9 37.6246455681024 39.0 37.0 39.0 35.0 39.0 10 36.99449502614409 39.0 37.0 39.0 33.0 39.0 11 36.70462696383432 39.0 35.0 39.0 32.0 39.0 12 36.149936350632316 38.0 35.0 39.0 32.0 39.0 13 35.87838186471451 38.0 35.0 39.0 31.0 39.0 14 36.949988917379365 39.0 35.0 41.0 31.0 41.0 15 37.138521856986955 39.0 35.0 41.0 32.0 41.0 16 37.27864372947747 39.0 35.0 41.0 32.0 41.0 17 37.17499639663428 39.0 35.0 41.0 32.0 41.0 18 37.0421575621626 39.0 35.0 41.0 32.0 41.0 19 36.976433382549054 38.0 35.0 41.0 32.0 41.0 20 36.82957715260223 38.0 35.0 41.0 31.0 41.0 21 36.71544069465624 38.0 35.0 40.0 31.0 41.0 22 36.59942443045625 38.0 35.0 40.0 31.0 41.0 23 36.51656639822097 38.0 35.0 40.0 31.0 41.0 24 36.372010266261476 38.0 35.0 40.0 31.0 41.0 25 36.286171433001016 38.0 35.0 40.0 30.0 41.0 26 36.045133518326296 38.0 35.0 40.0 30.0 41.0 27 36.024648232776215 38.0 35.0 40.0 30.0 41.0 28 36.107009666709864 38.0 35.0 40.0 30.0 41.0 29 36.12843727781768 38.0 35.0 40.0 30.0 41.0 30 36.11358172130661 38.0 35.0 40.0 30.0 41.0 31 36.01107050848032 38.0 35.0 40.0 30.0 41.0 32 35.81420925198972 38.0 35.0 40.0 29.0 41.0 33 35.64367012791646 38.0 34.0 40.0 29.0 41.0 34 35.45773766770791 38.0 34.0 40.0 27.0 41.0 35 35.3387587707133 38.0 34.0 40.0 27.0 41.0 36 35.104829479044156 38.0 34.0 40.0 26.0 41.0 37 35.04921773655339 38.0 34.0 40.0 26.0 41.0 38 34.96489292250523 37.0 34.0 40.0 26.0 41.0 39 34.83285591260839 37.0 34.0 40.0 25.0 41.0 40 34.67844533239989 37.0 34.0 40.0 24.0 41.0 41 34.648110443462286 37.0 34.0 40.0 24.0 41.0 42 34.56383044438281 37.0 33.0 40.0 24.0 41.0 43 34.4440400330904 37.0 33.0 40.0 24.0 41.0 44 34.35352227485626 36.0 33.0 40.0 23.0 41.0 45 34.199350304075615 36.0 33.0 40.0 23.0 41.0 46 34.11001711447317 36.0 33.0 40.0 23.0 41.0 47 34.06836220668906 36.0 33.0 40.0 23.0 41.0 48 33.97171569868353 35.0 33.0 40.0 23.0 41.0 49 33.85654365159632 36.0 33.0 40.0 23.0 41.0 50 33.709089081256806 35.0 33.0 40.0 23.0 41.0 51 33.23394140382284 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 9.0 14 10.0 15 32.0 16 64.0 17 195.0 18 440.0 19 886.0 20 1502.0 21 2351.0 22 3595.0 23 5182.0 24 7227.0 25 9763.0 26 12756.0 27 15210.0 28 16980.0 29 19221.0 30 22403.0 31 27454.0 32 34029.0 33 43780.0 34 69219.0 35 93656.0 36 69081.0 37 82683.0 38 115345.0 39 172484.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.66090693384463 23.92646953732784 28.412932388746842 14.99969114008069 2 31.69060230106696 26.169519280731862 28.704350806729995 13.43552761147118 3 28.81372355462642 26.369006452144273 31.35691246667644 13.460357526552869 4 24.823132275619326 28.81336019001547 31.98916688973216 14.374340644633044 5 23.77216069921041 31.934783319626415 29.690764603926517 14.602291377236662 6 22.30453103557703 41.79746783314782 26.083401867936345 9.814599263338811 7 88.61966262807088 2.9545176516471923 7.218237996552881 1.2075817237290414 8 88.86008887898383 3.309524876546874 6.3529457363402155 1.477440508129072 9 83.94097989745852 5.118717274474726 7.721497982720801 3.2188048453459657 10 42.66930065635761 32.53457717077047 13.659360211817345 11.136761961054582 11 37.0755447138322 23.508115748585602 23.782092665243084 15.63424687233911 12 33.11111568681362 21.78964338185866 27.650472313433465 17.448768617894252 13 23.805348000343983 29.831265586827794 28.804881682426597 17.558504730401626 14 20.380999906736417 31.60230470060573 29.370034773993268 18.646660618664587 15 18.39012520333278 24.45601289702126 38.71819499840725 18.435666901238708 16 21.5559999370168 22.812393640150336 36.93056223406253 18.70104418877034 17 22.48645558412678 22.050054686373947 28.92685107016934 26.53663865932993 18 23.07668083384911 23.87341830412891 31.835342537762667 21.21455832425931 19 26.91526458394146 25.092022087723485 27.36087071850507 20.63184260982998 20 28.619202366230347 25.33523413398707 26.552747823748785 19.492815676033803 21 25.863687399847628 26.269807913354498 28.974088469593045 18.89241621720483 22 25.271160840922608 23.75241788868204 28.018560664327406 22.957860606067946 23 23.061177277115174 27.143336438082066 27.773774038083033 22.021712246719726 24 21.770627300552192 25.496446899712577 33.170586361472694 19.562339438262537 25 21.188880558418735 26.726193864709664 31.41977454437106 20.665151032500543 26 20.627966720646498 29.91786748577125 28.030793939562777 21.42337185401948 27 21.319207332213363 29.00473221844996 28.479064747940026 21.196995701396652 28 19.11758115445782 27.71054859577746 33.549333407621205 19.62253684214351 29 20.509752100550255 25.485303718310064 32.6611491769186 21.343795004221086 30 21.196995701396652 28.1221195784486 30.471635152861438 20.20924956729331 31 26.092122618599177 26.1054459876674 26.675686183787402 21.126745209946016 32 26.8196996912612 26.053969334449267 27.625279033740824 19.501051940548706 33 25.33886778009658 27.11160259539229 26.563891005151298 20.985638619359825 34 21.318359481454475 27.485747023135428 28.90202115508765 22.293872340322448 35 21.78491964191629 26.76204583965689 29.4823144387773 21.97072007964952 36 27.02354723800503 26.59429251093425 26.59671494167392 19.785445309386798 37 22.45908211676843 29.426598531764732 27.8437822864597 20.27053706500714 38 22.49953671012104 29.273379787480152 26.145052730261124 22.08203077213769 39 22.563246638574544 28.473493157238767 27.001503118273966 21.961757085912716 40 24.377647262592703 26.066081488147653 26.681621139099608 22.87465011016004 41 20.676173092366074 25.318882726494245 28.66995229022658 25.3349918909131 42 22.689455280111723 26.962986469513105 26.369612059829194 23.97794619054598 43 22.24457587477002 26.576245401923654 27.204987300406845 23.97419142289948 44 21.47775542412523 28.155791365730114 28.357337603271247 22.009115606873404 45 20.725590679455486 29.948026748480228 26.429203856025254 22.897178716039036 46 22.72203697356038 29.14886684746075 26.730554240041084 21.398541938937786 47 21.892112202147 27.112571567688164 28.913164336490166 22.08215189367467 48 22.571482903089446 25.61962750282516 29.693550399277147 22.115339194808247 49 21.5874915366326 25.422199397541473 30.24525900023861 22.745050065587314 50 21.389942309811936 29.23147173568374 28.120181633856863 21.258404320647468 51 20.943488324489444 29.243705010919108 26.590779986361714 23.22202667822974 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 962.0 1 1246.0 2 1530.0 3 5997.5 4 10465.0 5 7112.5 6 3760.0 7 3992.5 8 4225.0 9 4654.0 10 5083.0 11 5316.5 12 5550.0 13 5355.0 14 5160.0 15 4803.5 16 4447.0 17 4226.5 18 4006.0 19 3998.0 20 3990.0 21 3961.5 22 3933.0 23 3936.5 24 3940.0 25 4716.0 26 6485.5 27 7479.0 28 8593.0 29 9707.0 30 11792.5 31 13878.0 32 15446.5 33 17015.0 34 19518.0 35 22021.0 36 23463.0 37 24905.0 38 28096.0 39 31287.0 40 37240.0 41 43193.0 42 50200.5 43 57208.0 44 62732.5 45 68257.0 46 64986.0 47 61715.0 48 60119.0 49 58523.0 50 56301.5 51 54080.0 52 51776.0 53 49472.0 54 46910.5 55 44349.0 56 42921.0 57 41493.0 58 37719.0 59 33945.0 60 33161.0 61 32377.0 62 29692.5 63 27008.0 64 23505.0 65 20002.0 66 17476.0 67 14950.0 68 12763.5 69 10577.0 70 8826.5 71 7076.0 72 5858.5 73 4641.0 74 4106.0 75 2863.5 76 2156.0 77 1611.0 78 1066.0 79 828.0 80 590.0 81 442.5 82 295.0 83 211.5 84 128.0 85 99.5 86 71.0 87 50.5 88 30.0 89 19.0 90 8.0 91 4.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 825617.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.74336259666894 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94431198892877 18.50660061901026 2 5.19619781884453 2.467504178736919 3 2.0174828824833946 1.4370548283412823 4 1.2350788756760482 1.1729970232265046 5 0.878769306215022 1.0432469138143232 6 0.7002476675787201 0.997574056727595 7 0.59229079701753 0.984408260938008 8 0.5646553242385971 1.0725452884429343 9 0.4881428724641575 1.0431137897906415 >10 9.407105737372943 54.954787629582 >50 0.9336511288686891 13.466096086254211 >100 0.0389876295571367 1.4476202500526425 >500 0.001538985377255396 0.27186271755300784 >1k 0.0010259902515035975 0.31558974067197276 >5k 5.129951257517988E-4 0.8189986168577171 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6724 0.8144212146794458 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 1510 0.18289352084562213 No Hit GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 1081 0.13093238147954803 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC 909 0.11009947711832485 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029674776561044648 0.0 2 0.0 0.0 0.0 0.11724564780037233 0.0 3 0.0 0.0 0.0 0.1630295887802698 0.0 4 0.0 0.0 0.0 0.28184981656143226 0.0 5 0.0 0.0 0.0 0.5492861702217856 0.0 6 0.0 0.0 0.0 0.761369981480517 0.0 7 0.0 0.0 0.0 0.9096227427487564 0.0 8 1.211215369838557E-4 0.0 0.0 1.1603443243053377 0.0 9 1.211215369838557E-4 0.0 0.0 1.2560303385225837 0.0 10 1.211215369838557E-4 0.0 0.0 1.5950495205403958 0.0 11 1.211215369838557E-4 0.0 0.0 1.7975647303774025 0.0 12 1.211215369838557E-4 0.0 0.0 2.086924082231834 0.0 13 1.211215369838557E-4 0.0 0.0 2.1782497211176612 0.0 14 1.211215369838557E-4 0.0 0.0 2.221853474431849 0.0 15 1.211215369838557E-4 0.0 0.0 2.2776905029814065 0.0 16 1.211215369838557E-4 0.0 0.0 2.367078197275492 0.0 17 1.211215369838557E-4 0.0 0.0 2.459615051531158 0.0 18 1.211215369838557E-4 0.0 0.0 2.572742567074079 0.0 19 1.211215369838557E-4 0.0 0.0 2.6737579289186146 0.0 20 1.211215369838557E-4 0.0 0.0 2.755999452530653 0.0 21 1.211215369838557E-4 0.0 0.0 2.8551979913204306 0.0 22 1.211215369838557E-4 0.0 0.0 2.970990180676997 0.0 23 1.211215369838557E-4 0.0 0.0 3.087266856181498 0.0 24 1.211215369838557E-4 0.0 0.0 3.183195113472712 0.0 25 1.211215369838557E-4 0.0 0.0 3.266163366306653 0.0 26 1.211215369838557E-4 0.0 0.0 3.3497372268255137 0.0 27 1.211215369838557E-4 0.0 0.0 3.433311087344374 0.0 28 1.211215369838557E-4 0.0 0.0 3.513251301753719 0.0 29 1.211215369838557E-4 0.0 0.0 3.6072416144531907 0.0 30 1.211215369838557E-4 0.0 0.0 3.731512311398627 0.0 31 1.211215369838557E-4 0.0 0.0 3.842096274664887 0.0 32 1.211215369838557E-4 0.0 0.0 3.936934438123246 0.0 33 1.211215369838557E-4 0.0 0.0 4.030440264674783 0.0 34 1.211215369838557E-4 0.0 0.0 4.13436254340693 0.0 35 1.211215369838557E-4 0.0 0.0 4.2604500634071245 0.0 36 1.211215369838557E-4 0.0 0.0 4.363040005232451 0.0 37 1.211215369838557E-4 0.0 0.0 4.486341729882016 0.0 38 1.211215369838557E-4 0.0 0.0 4.598500273129066 0.0 39 1.211215369838557E-4 0.0 0.0 4.758986309632674 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAG 60 0.0 45.000004 1 TATCACG 25 3.8898484E-5 45.0 1 TCTAACG 25 3.8898484E-5 45.0 1 TTCGCAT 35 1.2113742E-7 45.0 25 CGAGGGT 90 0.0 42.5 4 CGTAAGG 150 0.0 42.0 2 CGTTGAT 70 0.0 41.785713 25 ACGGGAC 205 0.0 41.707317 5 TATAGCG 60 3.6379788E-12 41.250004 1 CGTTTTT 3030 0.0 40.990097 1 TCGATAG 55 6.002665E-11 40.909092 1 TAGACGG 50 1.0804797E-9 40.5 2 CGTTAGG 150 0.0 40.5 2 TCATCGA 90 0.0 40.0 16 AACACGT 205 0.0 39.512196 41 CGACCAC 460 0.0 38.641308 12 TACGGGA 210 0.0 38.57143 4 GGCGATT 385 0.0 38.57143 8 CTCACGA 70 0.0 38.571426 24 CGACGGT 70 0.0 38.571426 28 >>END_MODULE