##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547320_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3150868 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.315432763289355 31.0 31.0 33.0 30.0 34.0 2 31.7210622596694 31.0 31.0 34.0 30.0 34.0 3 31.825007902584304 31.0 31.0 34.0 30.0 34.0 4 35.605063747513384 37.0 35.0 37.0 33.0 37.0 5 35.504481939579826 37.0 35.0 37.0 33.0 37.0 6 35.53530582683883 37.0 35.0 37.0 33.0 37.0 7 35.911720516378345 37.0 35.0 37.0 35.0 37.0 8 35.90956047666865 37.0 35.0 37.0 35.0 37.0 9 37.65125958942107 39.0 37.0 39.0 35.0 39.0 10 36.93607666204995 39.0 37.0 39.0 32.0 39.0 11 36.6756861918684 39.0 35.0 39.0 32.0 39.0 12 36.24784535562899 38.0 35.0 39.0 32.0 39.0 13 36.0382037584564 38.0 35.0 39.0 31.0 39.0 14 37.09996769144249 39.0 35.0 41.0 31.0 41.0 15 37.280891170306084 39.0 35.0 41.0 32.0 41.0 16 37.38889823375654 39.0 35.0 41.0 32.0 41.0 17 37.29048090875276 39.0 35.0 41.0 32.0 41.0 18 37.16550899625119 39.0 35.0 41.0 32.0 41.0 19 37.093105455385626 39.0 35.0 41.0 32.0 41.0 20 36.95049776759928 39.0 35.0 41.0 31.0 41.0 21 36.8150163700923 38.0 35.0 41.0 31.0 41.0 22 36.72547342510064 38.0 35.0 41.0 31.0 41.0 23 36.62545463662711 38.0 35.0 40.0 31.0 41.0 24 36.505189998438524 38.0 35.0 40.0 31.0 41.0 25 36.38515577294891 38.0 35.0 40.0 30.0 41.0 26 36.16438105309394 38.0 35.0 40.0 30.0 41.0 27 36.15887780763904 38.0 35.0 40.0 30.0 41.0 28 36.20938103405157 38.0 35.0 40.0 30.0 41.0 29 36.215817038352604 38.0 35.0 40.0 30.0 41.0 30 36.189244360601585 38.0 35.0 40.0 30.0 41.0 31 36.09408835914421 38.0 35.0 40.0 30.0 41.0 32 35.93648924677264 38.0 35.0 40.0 29.0 41.0 33 35.76928643154839 38.0 35.0 40.0 29.0 41.0 34 35.58075774675423 38.0 34.0 40.0 27.0 41.0 35 35.45779861295364 38.0 34.0 40.0 27.0 41.0 36 35.224009701453696 38.0 34.0 40.0 26.0 41.0 37 35.16841803591899 38.0 34.0 40.0 26.0 41.0 38 35.07419511068061 38.0 34.0 40.0 25.0 41.0 39 34.939409711863526 38.0 34.0 40.0 25.0 41.0 40 34.82178053793431 38.0 34.0 40.0 24.0 41.0 41 34.79219694382627 37.0 34.0 40.0 24.0 41.0 42 34.6999499820367 37.0 34.0 40.0 24.0 41.0 43 34.57893793075432 37.0 33.0 40.0 24.0 41.0 44 34.48546495759264 37.0 33.0 40.0 23.0 41.0 45 34.33401113597904 37.0 33.0 40.0 23.0 41.0 46 34.26372796321522 37.0 33.0 40.0 23.0 41.0 47 34.226550588599714 36.0 33.0 40.0 23.0 41.0 48 34.112335077191425 36.0 33.0 40.0 23.0 41.0 49 33.97959070326018 36.0 33.0 40.0 23.0 41.0 50 33.84796792502891 36.0 33.0 40.0 23.0 41.0 51 33.36592202529589 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 4.0 13 22.0 14 51.0 15 121.0 16 332.0 17 816.0 18 1811.0 19 3290.0 20 5577.0 21 8714.0 22 13089.0 23 19020.0 24 26666.0 25 37066.0 26 49244.0 27 59230.0 28 65663.0 29 74101.0 30 86267.0 31 103068.0 32 125941.0 33 159910.0 34 245780.0 35 326887.0 36 256604.0 37 320173.0 38 456160.0 39 705062.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.5981704089159 23.66827172702887 28.410964851590105 14.322593012465138 2 31.354376000517952 25.19051893002182 29.68778761915764 13.767317450302583 3 29.06662545051078 25.960021175117458 31.776323222680226 13.197030151691532 4 25.058491818762324 28.459427687862522 31.62668191749067 14.855398575884488 5 23.079545065042396 32.540207968090066 30.09684950305757 14.28339746380997 6 21.862610556837037 41.395323447380214 26.860534938309062 9.881531057473687 7 88.92343316190967 3.2397104543890762 6.569967386764536 1.266888996936717 8 89.61457604698134 2.409558255058606 6.545370989835182 1.4304947081248722 9 84.63083823251245 4.77804846156678 8.237856996865625 2.3532563090551557 10 40.32384092256483 30.610200109937956 15.845094113748972 13.220864853748237 11 33.777549551425196 24.765429716509864 24.76504886907354 16.6919718629914 12 31.132310207853838 22.782769700285762 27.541775790036272 18.54314430182413 13 23.608319993093964 27.77945632758973 29.650432833111385 18.961790846204917 14 20.07526180087519 30.586206721449454 30.251695723210236 19.08683575446512 15 19.144375454636627 25.189090752135602 37.5016027329612 18.164931060266568 16 22.54429573057329 23.251878529979674 35.872020027497186 18.33180571194985 17 22.71462974646986 23.649165880639874 29.15983786055144 24.476366512338824 18 24.06308356935295 24.102279118008116 31.945070374258776 19.889566938380156 19 26.760689435419067 25.304011466046816 27.868765051408058 20.066534047126062 20 27.35411321578689 25.60008861050352 27.89536089737812 19.150437276331473 21 25.296204093602142 26.60473241024378 29.34857950253708 18.750483993617 22 25.07927974132842 23.69965990323936 29.103726338266156 22.117334017166062 23 22.520175392939343 27.169751319318998 28.50750967669861 21.802563611043052 24 21.99352686307392 25.481645057806297 33.09792730130237 19.426900777817412 25 22.01206143830843 26.170026798964603 31.313466638399323 20.504445124327646 26 20.692742444304237 29.016544012633975 28.828913175670955 21.461800367390826 27 20.974633021757814 28.65616712601099 29.7779532497077 20.591246602523494 28 19.673721653842687 27.792659038715684 32.76973202304889 19.763887284392744 29 20.563635163389897 25.835293639720863 32.151807057610796 21.449264139278444 30 21.46700528235394 27.259186992282764 30.66926319985477 20.604544525508526 31 24.834394839771136 27.090058993267885 28.16170020451507 19.913845962445905 32 25.82472512336283 26.76024511341002 28.16782550078264 19.247204262444505 33 25.070012453711165 26.78944341686164 27.598331634330602 20.54221249509659 34 20.954257683914403 28.094734530294506 29.374032806198162 21.576974979592926 35 21.71274709064296 27.110846915833985 29.92235790264778 21.254048090875276 36 25.926855710870782 27.18073242039971 26.98034319431979 19.91206867440972 37 22.066459147130253 29.576834066041485 28.06604402342466 20.290662763403606 38 22.401033619942186 29.60644495421579 26.91252061336749 21.08000081247453 39 22.14088308364552 28.27896947761696 27.671898664114142 21.908248774623374 40 23.67519045545545 26.803693458437483 28.117363215469517 21.40375287063755 41 21.246177243857883 25.519348954002517 29.093411720199004 24.141062081940596 42 22.8977538887697 27.09209017959496 26.951779636595376 23.05837629503997 43 22.169668802374456 26.392378227205963 28.370182438616915 23.067770531802665 44 21.82963551630852 27.9245909381161 28.656706659879116 21.58906688569626 45 20.758565576215823 30.213737928723134 26.88449658951121 22.143199905549835 46 22.092420247373106 28.63807687278553 27.463892489307707 21.805610390533655 47 21.562471039726198 27.624737056582504 28.57412624076921 22.23866566292209 48 22.416267517395205 27.03813679278218 29.66668232372794 20.878913366094675 49 21.954172627986953 25.9737951573979 30.32570707500282 21.74632513961232 50 21.30406605417936 29.370763865703037 28.2135271931417 21.111642886975908 51 20.61574778759377 29.231437178580634 27.719504593654825 22.43331044017077 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3103.0 1 4511.5 2 5920.0 3 21541.5 4 37163.0 5 25664.0 6 14165.0 7 14920.0 8 15675.0 9 16778.5 10 17882.0 11 18689.5 12 19497.0 13 19006.5 14 18516.0 15 17758.5 16 17001.0 17 16566.0 18 16131.0 19 15907.5 20 15684.0 21 15784.0 22 15884.0 23 17290.5 24 18697.0 25 20793.0 26 27238.5 27 31588.0 28 36674.0 29 41760.0 30 48023.5 31 54287.0 32 63692.0 33 73097.0 34 81565.0 35 90033.0 36 98956.0 37 107879.0 38 119207.5 39 130536.0 40 154629.5 41 178723.0 42 197277.0 43 215831.0 44 232131.0 45 248431.0 46 246579.0 47 244727.0 48 234614.0 49 224501.0 50 214838.5 51 205176.0 52 196696.5 53 188217.0 54 181580.5 55 174944.0 56 164145.5 57 153347.0 58 142906.5 59 132466.0 60 120739.0 61 109012.0 62 98847.0 63 88682.0 64 78398.5 65 68115.0 66 58441.0 67 48767.0 68 42303.5 69 35840.0 70 30099.5 71 24359.0 72 20523.5 73 16688.0 74 13824.0 75 9153.0 76 7346.0 77 5757.0 78 4168.0 79 2958.5 80 1749.0 81 1312.0 82 875.0 83 545.0 84 215.0 85 187.5 86 160.0 87 129.5 88 99.0 89 71.5 90 44.0 91 30.0 92 16.0 93 15.5 94 15.0 95 11.0 96 7.0 97 4.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3150868.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.630627639030603 #Duplication Level Percentage of deduplicated Percentage of total 1 82.24882087684074 15.323471555057463 2 6.68399807453919 2.4905415853347432 3 2.078834881942898 1.1618999582551883 4 1.0015525334168012 0.7463820924406472 5 0.6866421422921493 0.6396287037155651 6 0.4652270058534478 0.5200482668206018 7 0.33031649745229813 0.4307802566943797 8 0.2837234899913956 0.42287573555807345 9 0.2259570421250452 0.3788749362823622 >10 2.912114154185932 13.545207485322369 >50 1.6210783451230941 22.157200829431297 >100 1.456227433220042 40.617730110886505 >500 0.004302752356987183 0.5502707392226261 >1k 0.001032660565676924 0.2668144526001674 >5k 0.0 0.0 >10k+ 1.721100942794873E-4 0.7482732923780202 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23336 0.7406213145076214 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02770665099267884 0.0 2 0.0 0.0 0.0 0.0834373258416411 0.0 3 0.0 0.0 0.0 0.119554357719841 0.0 4 0.0 0.0 0.0 0.21378236092403743 0.0 5 0.0 0.0 0.0 0.35475938693718684 0.0 6 0.0 0.0 0.0 0.6102445421388646 0.0 7 0.0 0.0 0.0 0.7261173746408927 0.0 8 0.0 0.0 0.0 0.9919488851960793 0.0 9 0.0 0.0 0.0 1.0889380323136355 0.0 10 0.0 0.0 0.0 1.2543527688243366 0.0 11 0.0 0.0 0.0 1.448045427482205 0.0 12 0.0 0.0 0.0 1.6067318592844892 0.0 13 0.0 0.0 0.0 1.6814096940906442 0.0 14 0.0 0.0 0.0 1.7189231665687041 0.0 15 0.0 0.0 0.0 1.7608163845645073 0.0 16 0.0 0.0 0.0 1.8453962527151249 0.0 17 0.0 0.0 0.0 1.9429884082735298 0.0 18 0.0 0.0 0.0 2.06387573202051 0.0 19 0.0 0.0 0.0 2.1358241601996655 0.0 20 0.0 0.0 0.0 2.2136757236418663 0.0 21 0.0 0.0 0.0 2.3210747006856525 0.0 22 0.0 0.0 0.0 2.439930838105563 0.0 23 0.0 0.0 0.0 2.5656739666656936 0.0 24 0.0 0.0 0.0 2.665678155987493 0.0 25 0.0 0.0 0.0 2.7549551425194583 0.0 26 0.0 0.0 0.0 2.840233230970006 0.0 27 0.0 0.0 0.0 2.9288437344884013 0.0 28 0.0 0.0 0.0 3.021072288651889 0.0 29 3.173728636045686E-5 0.0 0.0 3.1225998677189906 0.0 30 3.173728636045686E-5 0.0 0.0 3.255452148423863 0.0 31 3.173728636045686E-5 0.0 0.0 3.3683734132943686 0.0 32 3.173728636045686E-5 0.0 0.0 3.4831354407737805 0.0 33 6.347457272091373E-5 0.0 0.0 3.5999921291529824 0.0 34 6.347457272091373E-5 0.0 0.0 3.720244707172754 0.0 35 6.347457272091373E-5 0.0 0.0 3.858460589272543 0.0 36 6.347457272091373E-5 0.0 0.0 3.9844893534099177 0.0 37 6.347457272091373E-5 0.0 0.0 4.111724134428989 0.0 38 6.347457272091373E-5 0.0 0.0 4.250352601251465 0.0 39 6.347457272091373E-5 0.0 0.0 4.456264115158109 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGTAT 20 7.035159E-4 45.000004 35 CGACGTA 25 3.8923587E-5 45.0 38 ACGTTAC 25 3.8923587E-5 45.0 22 ATCGTCC 65 0.0 41.538464 10 CGTAAGG 725 0.0 40.96552 2 CGTTTTT 12340 0.0 40.715153 1 TAATGCG 140 0.0 40.17857 1 CGTTAGG 485 0.0 39.896908 2 GGGCGAT 5555 0.0 39.32943 7 GCGTAAG 275 0.0 39.272724 1 GACCGAT 1810 0.0 38.78453 9 CGGTCTA 245 0.0 38.57143 31 TCGTAAG 205 0.0 38.414635 1 TAAGGGA 3640 0.0 37.953297 4 ATAGGGC 1690 0.0 37.94379 4 ATAGGGA 3505 0.0 37.68188 4 TACGGGA 1085 0.0 37.53456 4 AGGGCGA 3130 0.0 37.52396 6 TAGGGAC 3190 0.0 37.382446 5 TAGGGTA 1680 0.0 37.098213 5 >>END_MODULE