##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547319_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1730795 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238059966662718 31.0 31.0 33.0 30.0 34.0 2 31.621216261891213 31.0 31.0 34.0 30.0 34.0 3 31.598607576287197 31.0 31.0 34.0 30.0 34.0 4 35.44661037269001 37.0 35.0 37.0 33.0 37.0 5 35.36914077057075 37.0 35.0 37.0 33.0 37.0 6 35.42206616034828 37.0 35.0 37.0 33.0 37.0 7 35.87127129440517 37.0 35.0 37.0 35.0 37.0 8 35.881134391999055 37.0 35.0 37.0 35.0 37.0 9 37.61282300907964 39.0 37.0 39.0 35.0 39.0 10 36.89478881092215 39.0 37.0 39.0 32.0 39.0 11 36.58754618542346 39.0 35.0 39.0 32.0 39.0 12 36.164044268674225 38.0 35.0 39.0 32.0 39.0 13 35.93011592938505 38.0 35.0 39.0 31.0 39.0 14 37.018868785731414 39.0 35.0 41.0 31.0 41.0 15 37.216751839472614 39.0 35.0 41.0 32.0 41.0 16 37.334976123688826 39.0 35.0 41.0 32.0 41.0 17 37.24651561854523 39.0 35.0 41.0 32.0 41.0 18 37.050683645376836 39.0 35.0 40.0 32.0 41.0 19 36.89118757565165 38.0 35.0 40.0 31.0 41.0 20 36.67005624582923 38.0 35.0 40.0 31.0 41.0 21 36.52404935304297 38.0 35.0 40.0 31.0 41.0 22 36.417902755670085 38.0 35.0 40.0 31.0 41.0 23 36.34590982756479 38.0 35.0 40.0 31.0 41.0 24 36.17977692332136 38.0 35.0 40.0 30.0 41.0 25 36.01604869438611 37.0 35.0 40.0 30.0 41.0 26 35.77979541193498 37.0 34.0 40.0 30.0 41.0 27 35.708738469893895 37.0 34.0 40.0 30.0 41.0 28 35.65288494593525 37.0 34.0 40.0 30.0 41.0 29 35.60246765214829 37.0 34.0 40.0 29.0 41.0 30 35.51596058458685 37.0 34.0 40.0 29.0 41.0 31 35.35511253499114 37.0 34.0 40.0 28.0 41.0 32 35.08986737308578 37.0 34.0 40.0 27.0 41.0 33 34.76860691185264 37.0 33.0 40.0 25.0 41.0 34 34.445427101418716 36.0 33.0 40.0 23.0 41.0 35 34.1749565950907 36.0 33.0 40.0 23.0 41.0 36 33.88892214271476 36.0 33.0 40.0 21.0 41.0 37 33.80676394373684 36.0 33.0 40.0 21.0 41.0 38 33.7348403479326 36.0 33.0 40.0 21.0 41.0 39 33.613286379958346 36.0 33.0 40.0 20.0 41.0 40 33.48927111529673 35.0 33.0 40.0 20.0 41.0 41 33.45534624262261 35.0 33.0 40.0 20.0 41.0 42 33.36880277560312 35.0 33.0 40.0 19.0 41.0 43 33.240009937629814 35.0 33.0 40.0 18.0 41.0 44 33.136394547014525 35.0 32.0 40.0 18.0 41.0 45 32.98866070216288 35.0 32.0 40.0 18.0 41.0 46 32.89195658642416 35.0 32.0 39.0 18.0 41.0 47 32.83916639463368 35.0 32.0 39.0 18.0 41.0 48 32.69239915761254 35.0 31.0 39.0 18.0 41.0 49 32.5495954171349 35.0 31.0 39.0 18.0 41.0 50 32.40227063285947 35.0 31.0 39.0 18.0 41.0 51 31.992482067489217 35.0 31.0 38.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 12.0 14 33.0 15 81.0 16 236.0 17 598.0 18 1230.0 19 2419.0 20 4201.0 21 6559.0 22 9803.0 23 14279.0 24 20510.0 25 29655.0 26 38922.0 27 43851.0 28 44989.0 29 47548.0 30 52993.0 31 62137.0 32 74081.0 33 93211.0 34 140889.0 35 190315.0 36 167951.0 37 170090.0 38 213803.0 39 300297.0 40 94.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.18295349824792 22.484176346707727 27.008686759552692 19.324183395491666 2 35.99975733694632 23.911612871541692 27.5157947648335 12.572835026678492 3 26.58165756198741 24.702174434291756 35.911763091527305 12.80440491219353 4 23.54062728399377 27.384930046597084 35.43718349082358 13.637259178585564 5 21.116885593036727 31.187517874733867 34.39309681389188 13.302499718337527 6 20.655421352615416 39.47215008132101 30.47628401977126 9.39614454629231 7 83.59360871738131 3.1800993185212576 11.788282263352968 1.4380097007444554 8 83.84459164719104 2.659875952958034 11.578667606504526 1.9168647933464102 9 79.40189334958791 4.878451809717499 13.260264791613102 2.4593900490814913 10 40.273227043064026 28.10459933152106 19.440892768929885 12.181280856485026 11 32.14840579040268 24.887580562689397 27.63394856121031 15.330065085697614 12 30.144008966977605 22.604179004445935 29.95762063098172 17.294191397594748 13 21.31061159756066 29.715188684968467 31.735185276130334 17.23901444134054 14 17.746006892786262 32.32930531923191 31.873676547482514 18.05101124049931 15 16.863637808059302 27.211772624718698 38.99993933423658 16.92465023298542 16 19.15241261963433 25.59875664073446 38.04737129469405 17.201459444937154 17 19.43107069294746 26.4288376150844 30.4220892711153 23.718002420852848 18 20.575978090992866 27.668614711736517 33.40239600877054 18.353011188500084 19 23.364754346990836 30.061850190230498 28.417056901597242 18.156338561181425 20 25.196340410042783 28.698834928457735 28.491878009816297 17.61294665168319 21 21.799924312238016 30.329703979962964 30.54474966706051 17.325622040738505 22 21.70066356789799 28.05069346745282 29.964438307251868 20.28420465739732 23 20.353479181532187 30.41573381018549 28.756496292166318 20.474290716116002 24 20.14190010948726 28.431616684818252 34.06954607564732 17.356937130047175 25 19.208225121981517 29.686415780031723 32.207627130884944 18.897731967101823 26 18.58538995086073 32.869808382852966 28.820166455299447 19.72463521098686 27 18.550723800334527 32.58398597176442 29.677460357812453 19.187829870088603 28 17.88773367152089 31.603685011800938 32.647656134897545 17.860925181780626 29 18.53922619374334 28.795957926848644 32.84276878544253 19.822047093965487 30 19.3174812730566 31.17440251445145 30.916428577618955 18.59168763487299 31 23.45627298438001 30.399729604025893 27.667112511880376 18.476884899713717 32 24.72632518582501 30.193177123807267 27.089054451855937 17.99144323851178 33 23.467192821795766 31.489344491982006 26.75695272981491 18.286509956407315 34 20.628901747462873 31.061275309900942 28.363093260611453 19.94672968202473 35 20.074301115961163 31.076123977709663 29.350269673762636 19.499305232566538 36 24.4136942849962 30.97801877172051 26.824262838753288 17.78402410453 37 20.180552867323975 33.60906404282425 28.106390415964917 18.103992673886857 38 19.740177201806105 33.84063392833929 27.47280873818101 18.946380131673596 39 19.64680970305553 33.961387686005565 27.16370222932236 19.22810038161654 40 22.285597081110126 31.27204550510026 27.191608480495955 19.25074893329366 41 18.40882369084727 30.32398406512614 28.77637155180134 22.49082069222525 42 20.33608832935154 31.38806155552795 26.192472245413235 22.083377869707274 43 20.314768646777924 31.28868525735283 27.62984640006471 20.76669969580453 44 19.805118457125193 32.125121692632575 27.4080985905321 20.661661259710133 45 18.43245445012263 34.402745559121676 25.851010662730133 21.31378932802556 46 20.520974465491292 33.54435389517534 26.180396869646604 19.754274769686763 47 19.694706767699234 32.12650833865362 27.364823679291888 20.813961214355253 48 21.162702688648857 30.40781837248201 28.42399013170248 20.00548880716665 49 19.922347822821305 30.172030771986286 28.8735523271098 21.032069078082614 50 19.17084345633076 32.7612455547884 28.54041062055298 19.52750036832785 51 18.427485635213873 33.250789377135945 26.885333040596954 21.43639194705323 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2006.0 1 2438.0 2 2870.0 3 29287.5 4 55705.0 5 34867.0 6 14029.0 7 15272.5 8 16516.0 9 20226.0 10 23936.0 11 27472.5 12 31009.0 13 31741.5 14 32474.0 15 30055.5 16 27637.0 17 24926.5 18 22216.0 19 20042.0 20 17868.0 21 16303.0 22 14738.0 23 14887.0 24 15036.0 25 15237.5 26 16398.5 27 17358.0 28 19337.0 29 21316.0 30 24123.5 31 26931.0 32 31640.5 33 36350.0 34 39077.5 35 41805.0 36 46486.5 37 51168.0 38 57368.5 39 63569.0 40 73971.0 41 84373.0 42 94106.5 43 103840.0 44 108996.0 45 114152.0 46 119134.0 47 124116.0 48 124860.0 49 125604.0 50 118131.5 51 110659.0 52 104178.5 53 97698.0 54 88803.0 55 79908.0 56 73420.5 57 66933.0 58 65659.5 59 64386.0 60 59739.0 61 55092.0 62 49373.5 63 43655.0 64 39148.5 65 34642.0 66 29838.5 67 25035.0 68 21944.5 69 18854.0 70 15636.0 71 12418.0 72 9831.0 73 7244.0 74 6113.5 75 4213.5 76 3444.0 77 2658.5 78 1873.0 79 1395.0 80 917.0 81 756.5 82 596.0 83 411.0 84 226.0 85 140.0 86 54.0 87 43.0 88 32.0 89 29.5 90 27.0 91 32.0 92 37.0 93 27.0 94 17.0 95 10.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1730795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.926061844116656 #Duplication Level Percentage of deduplicated Percentage of total 1 78.59914082299908 21.16365326694507 2 7.447110934714399 4.010427391762346 3 3.1593782837612827 2.5520884517254627 4 1.8632428640065783 2.006791703474007 5 1.1846010439793977 1.594832048539721 6 0.8064879120879366 1.3029326038447377 7 0.6065913628312625 1.1433181584791101 8 0.4668434963646629 1.0056205483710847 9 0.3693124561528977 0.8949717030757989 >10 3.831705067645591 24.23684311068935 >50 1.3462141667145242 25.653707138908306 >100 0.31568319439836945 10.939021809802512 >500 0.0021696437318144976 0.35221394669299677 >1k 0.0013017862390886984 0.5052742453056442 >5k 0.0 0.0 >10k+ 2.1696437318144974E-4 2.6383038723838825 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45161 2.6092633731897767 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1555383508734426E-4 0.0 0.0 0.057372479120866425 0.0 2 1.1555383508734426E-4 0.0 0.0 0.15305105457318746 0.0 3 1.1555383508734426E-4 0.0 0.0 0.23468983906239618 0.0 4 1.1555383508734426E-4 0.0 0.0 0.3602390808847957 0.0 5 1.1555383508734426E-4 0.0 0.0 0.6658789746908212 0.0 6 1.1555383508734426E-4 0.0 0.0 1.357584231523664 0.0 7 1.1555383508734426E-4 0.0 0.0 1.827021686566 0.0 8 1.1555383508734426E-4 0.0 0.0 2.5465754176548927 0.0 9 1.1555383508734426E-4 0.0 0.0 2.946507240892191 0.0 10 1.1555383508734426E-4 0.0 0.0 3.378794137953946 0.0 11 1.1555383508734426E-4 0.0 0.0 3.749433063996603 0.0 12 1.1555383508734426E-4 0.0 0.0 4.028322244979908 0.0 13 1.1555383508734426E-4 0.0 0.0 4.211128412088087 0.0 14 1.1555383508734426E-4 0.0 0.0 4.316051294347395 0.0 15 1.1555383508734426E-4 0.0 0.0 4.3972856404137985 0.0 16 1.1555383508734426E-4 0.0 0.0 4.5166527520590245 0.0 17 1.1555383508734426E-4 0.0 0.0 4.652139623698936 0.0 18 1.1555383508734426E-4 0.0 0.0 4.820443784503653 0.0 19 1.1555383508734426E-4 0.0 0.0 4.930162150919086 0.0 20 1.1555383508734426E-4 0.0 0.0 5.048893716471333 0.0 21 1.1555383508734426E-4 0.0 0.0 5.193336010330513 0.0 22 1.1555383508734426E-4 0.0 0.0 5.3441915420370405 0.0 23 1.1555383508734426E-4 0.0 0.0 5.511051279903166 0.0 24 1.1555383508734426E-4 0.0 0.0 5.652835835555337 0.0 25 1.1555383508734426E-4 0.0 0.0 5.793464852856635 0.0 26 1.1555383508734426E-4 0.0 0.0 5.913005295254493 0.0 27 1.1555383508734426E-4 0.0 0.0 6.028559130341837 0.0 28 1.1555383508734426E-4 0.0 0.0 6.149832880266005 0.0 29 1.1555383508734426E-4 0.0 0.0 6.288670813123449 0.0 30 1.1555383508734426E-4 0.0 0.0 6.479161310264936 0.0 31 1.1555383508734426E-4 0.0 0.0 6.629496849713571 0.0 32 1.7333075263101637E-4 0.0 0.0 6.772321389881529 0.0 33 1.7333075263101637E-4 0.0 0.0 6.914799268544224 0.0 34 1.7333075263101637E-4 0.0 0.0 7.059819331578841 0.0 35 1.7333075263101637E-4 0.0 0.0 7.235172276323886 0.0 36 1.7333075263101637E-4 0.0 0.0 7.382618969895337 0.0 37 2.311076701746885E-4 0.0 0.0 7.540696616294824 0.0 38 2.311076701746885E-4 0.0 0.0 7.71165851530655 0.0 39 2.311076701746885E-4 0.0 0.0 7.928726394518126 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCGAC 35 1.212411E-7 45.000004 15 TATATCG 20 7.034278E-4 45.0 1 TGTTACG 60 0.0 44.999996 1 CGTACAC 30 2.1661417E-6 44.999996 23 CGTTTTT 15675 0.0 43.492825 1 TAATGCG 75 0.0 42.000004 1 ATACCGG 60 3.6379788E-12 41.249996 2 CTAACGG 50 1.0822987E-9 40.5 2 GCTTACG 50 1.0822987E-9 40.5 1 TAGGGTA 835 0.0 40.1497 5 CGACGGT 205 0.0 39.512196 28 TACGGGA 405 0.0 39.444447 4 TTAACGC 40 3.4595723E-7 39.375 31 CGTAATA 40 3.4595723E-7 39.375 25 ACGGGAT 480 0.0 39.374996 5 TCTCACG 195 0.0 39.23077 23 CGACAAT 230 0.0 39.130432 20 GTATGCG 75 0.0 39.000004 1 GTTTTTT 17945 0.0 38.74338 2 GGGCGAT 3100 0.0 38.612904 7 >>END_MODULE