##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547318_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 738982 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.401802750269965 31.0 31.0 33.0 30.0 34.0 2 31.806612339678097 31.0 31.0 34.0 30.0 34.0 3 31.76678457662027 31.0 31.0 34.0 30.0 34.0 4 35.61295674319537 37.0 35.0 37.0 33.0 37.0 5 35.565868992749486 37.0 35.0 37.0 33.0 37.0 6 35.614604956548334 37.0 35.0 37.0 33.0 37.0 7 35.97461778500694 37.0 35.0 37.0 35.0 37.0 8 35.97065693075068 37.0 35.0 37.0 35.0 37.0 9 37.74055930996966 39.0 38.0 39.0 35.0 39.0 10 37.105324622250606 39.0 37.0 39.0 33.0 39.0 11 36.82888487135005 39.0 37.0 39.0 32.0 39.0 12 36.59263013172175 39.0 35.0 39.0 32.0 39.0 13 36.509717422075234 39.0 35.0 39.0 32.0 39.0 14 37.6387990505858 40.0 36.0 41.0 32.0 41.0 15 37.7291990873932 40.0 36.0 41.0 32.0 41.0 16 37.781303198183444 40.0 36.0 41.0 33.0 41.0 17 37.673832380220354 40.0 36.0 41.0 32.0 41.0 18 37.44120560446669 39.0 36.0 41.0 32.0 41.0 19 37.26459237166805 39.0 36.0 41.0 32.0 41.0 20 37.03126057197604 39.0 35.0 41.0 32.0 41.0 21 36.9151589619233 38.0 35.0 41.0 31.0 41.0 22 36.833714488309596 38.0 35.0 40.0 31.0 41.0 23 36.707651877853586 38.0 35.0 40.0 31.0 41.0 24 36.588602970031744 38.0 35.0 40.0 31.0 41.0 25 36.47614150277003 38.0 35.0 40.0 31.0 41.0 26 36.28934940228585 38.0 35.0 40.0 30.0 41.0 27 36.26776565599703 38.0 35.0 40.0 30.0 41.0 28 36.250788246533745 38.0 35.0 40.0 30.0 41.0 29 36.20200627349516 38.0 35.0 40.0 30.0 41.0 30 36.1303401165387 38.0 35.0 40.0 30.0 41.0 31 35.99679288534768 38.0 35.0 40.0 30.0 41.0 32 35.72016774427523 38.0 35.0 40.0 29.0 41.0 33 35.354635160261005 38.0 34.0 40.0 26.0 41.0 34 34.94682549777938 38.0 34.0 40.0 24.0 41.0 35 34.670487237848825 38.0 34.0 40.0 23.0 41.0 36 34.42138509463018 38.0 33.0 40.0 21.0 41.0 37 34.370788463047816 38.0 33.0 40.0 21.0 41.0 38 34.25810506886501 38.0 33.0 40.0 21.0 41.0 39 34.09991447694261 38.0 33.0 40.0 20.0 41.0 40 33.99343962369855 37.0 33.0 40.0 19.0 41.0 41 33.925508334438454 37.0 33.0 40.0 18.0 41.0 42 33.830612924266084 37.0 33.0 40.0 18.0 41.0 43 33.698431084924934 37.0 33.0 40.0 18.0 41.0 44 33.598241905756836 37.0 33.0 40.0 18.0 41.0 45 33.44071168174597 37.0 33.0 40.0 18.0 41.0 46 33.366192951925754 36.0 33.0 40.0 18.0 41.0 47 33.31975068404914 36.0 32.0 40.0 18.0 41.0 48 33.18516283211228 36.0 32.0 40.0 18.0 41.0 49 33.05255608391003 36.0 32.0 40.0 18.0 41.0 50 32.94849671575221 35.0 32.0 40.0 18.0 41.0 51 32.48739617473768 35.0 31.0 39.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 4.0 14 13.0 15 17.0 16 65.0 17 165.0 18 449.0 19 804.0 20 1435.0 21 2226.0 22 3278.0 23 4951.0 24 7624.0 25 11589.0 26 16531.0 27 19265.0 28 19107.0 29 19094.0 30 20231.0 31 23217.0 32 27588.0 33 35027.0 34 51442.0 35 64492.0 36 64325.0 37 77644.0 38 107757.0 39 160586.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.265394826937595 22.501089336411443 26.63529016944932 21.598225667201636 2 37.7158036325648 23.637246915351117 26.369383828022876 12.277565624061209 3 26.891724020341496 24.131034314773565 36.44297154734486 12.534270117540075 4 23.82453158534308 26.554909321201333 36.439453193717846 13.181105899737746 5 21.744237342722826 30.656633043835978 34.36200069825787 13.23712891518332 6 20.87642188848984 38.826656129648626 31.103734597053784 9.19318738480775 7 83.89595416397152 2.408719021572921 12.661066169406022 1.034260645049541 8 84.23087436500482 2.1127713530234837 12.529669193566285 1.126685088405401 9 79.6089755907451 4.459107258363533 13.681524042534187 2.2503931083571724 10 35.83632618927119 34.28324370553004 19.485454314178153 10.39497579102062 11 26.72351965271143 24.90696661082408 32.28657802219811 16.082935714266384 12 25.47964632426771 21.821505801223847 34.83941422118536 17.859433653323084 13 22.686479508296546 23.0218056732099 36.37436365161803 17.917351166875513 14 20.122140999374814 25.301563502223328 35.65743143946673 18.91886405893513 15 19.01548346238474 24.8364642169904 38.410949116487274 17.737103204137583 16 23.181078835479077 24.07690579743485 36.007236982768184 16.734778384317885 17 23.209360985788557 23.844153172878364 33.676868990043054 19.269616851290017 18 22.842234316938708 24.12237375199937 35.05863471640717 17.976757214654754 19 23.853355020825948 25.508199117163883 32.58103715652073 18.057408705489443 20 25.467061443986456 25.31888462777172 32.295373906265645 16.91868002197618 21 24.449309996725223 24.7332140701668 33.65535290440092 17.16212302870706 22 23.930623479326965 22.779851200705835 34.23533996768528 19.054185352281923 23 21.98673310040028 24.796679756746443 34.2490074183133 18.967579724539977 24 21.595383920041357 24.85879223039262 35.05714618218035 18.488677667385677 25 21.853576947747037 25.699814068542942 33.46806823440896 18.978540749301064 26 21.201734277695532 26.612285549580367 32.90066605140585 19.285314121318244 27 20.507536042826484 25.750965517428032 34.120587510927194 19.620910928818294 28 19.945817354143944 26.581567615990647 34.295557943224594 19.17705708664081 29 21.06127077520156 24.765691180570027 34.681629593143 19.491408451085412 30 21.341791816309463 25.086943930975313 34.6055790262821 18.96568522643312 31 23.169035240371212 25.26367354008623 32.6075601300167 18.95973108952586 32 23.580817936025504 25.52727941952578 32.00226798487649 18.88963465957222 33 22.802179214108058 26.39184716271844 32.111201626020666 18.69477199715284 34 21.683613403303465 26.544895545493663 32.89836558941896 18.873125461783914 35 21.662773924128057 27.72882154098476 31.46883144650343 19.13957308838375 36 22.92356241424013 28.398120657878 29.70451242384794 18.97380450403393 37 22.679036837162474 28.661591216024206 29.731712003810646 18.927659943002674 38 22.546963254856003 28.148723514239858 29.536984662684613 19.767328568219526 39 22.20500634656866 28.92100213537001 28.895426410927467 19.978565107133868 40 22.91760827733287 27.510683616109727 29.554035145646306 20.01767296091109 41 20.830818612631973 27.928285127377933 29.973531155021366 21.26736510496873 42 21.616088077923415 28.19811578631144 29.040896801275267 21.14489933448988 43 21.531106305701627 27.429220197514958 30.01385690043871 21.0258165963447 44 21.48807413441735 28.00447101553218 29.747679916425568 20.759774933624904 45 21.389018947687493 28.220173157126965 29.307750391755143 21.083057503430393 46 21.693491857717778 28.356577020820534 29.289076053273288 20.6608550681884 47 21.257486650554412 27.881734602466636 30.51346311547507 20.34731563150388 48 21.720691437680482 27.19957996270545 30.598309566403515 20.481419033210553 49 21.654789967820594 27.45236013867726 30.408724434424656 20.484125459077486 50 20.70050420713901 28.125583573077556 30.727135437669663 20.446776782113773 51 20.669380309669247 28.335872862938476 30.300738042333915 20.694008785058365 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 582.0 1 930.0 2 1278.0 3 12581.0 4 23884.0 5 15892.0 6 7900.0 7 7680.0 8 7460.0 9 7951.0 10 8442.0 11 8388.5 12 8335.0 13 8463.0 14 8591.0 15 8063.0 16 7535.0 17 7185.5 18 6836.0 19 6333.5 20 5831.0 21 5752.5 22 5674.0 23 5701.0 24 5728.0 25 6104.5 26 7646.0 27 8811.0 28 10301.0 29 11791.0 30 13307.5 31 14824.0 32 16216.5 33 17609.0 34 20066.0 35 22523.0 36 25158.0 37 27793.0 38 28924.5 39 30056.0 40 32593.5 41 35131.0 42 38339.0 43 41547.0 44 43331.0 45 45115.0 46 45443.5 47 45772.0 48 45258.5 49 44745.0 50 43972.5 51 43200.0 52 40922.5 53 38645.0 54 37067.5 55 35490.0 56 34324.5 57 33159.0 58 32110.5 59 31062.0 60 29299.5 61 27537.0 62 25063.5 63 22590.0 64 20137.5 65 17685.0 66 15529.5 67 13374.0 68 11093.0 69 8812.0 70 7698.0 71 6584.0 72 5316.5 73 4049.0 74 3496.5 75 2352.5 76 1761.0 77 1357.5 78 954.0 79 714.5 80 475.0 81 343.5 82 212.0 83 144.0 84 76.0 85 66.0 86 56.0 87 39.0 88 22.0 89 15.5 90 9.0 91 8.5 92 8.0 93 5.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 738982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.39971477935738 #Duplication Level Percentage of deduplicated Percentage of total 1 68.67837759835615 25.68551733687528 2 8.137763436667733 6.087000629465127 3 4.668401826847237 5.23790690398553 4 3.4721739944900216 5.1943326823291525 5 2.6703437217721593 4.993504677856321 6 2.2104555112685786 4.960224339234206 7 1.814700135010365 4.750848722161429 8 1.4776288156496167 4.421031700404425 9 1.2141822216228897 4.086906190097631 >10 5.621486362643113 30.986955004979126 >50 0.021780872236120446 0.5373633772130232 >100 0.011979474668335922 0.8186710554204675 >500 3.6301438388886367E-4 0.07317805951435481 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.6301438388886367E-4 2.1665593204639597 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15958 2.1594571992281275 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.353212933467933E-4 0.0 0.0 0.018268374601817093 0.0 2 1.353212933467933E-4 0.0 0.0 0.05832347743246791 0.0 3 1.353212933467933E-4 0.0 0.0 0.09810793767642513 0.0 4 1.353212933467933E-4 0.0 0.0 0.15237177630848925 0.0 5 1.353212933467933E-4 0.0 0.0 0.3383032333669832 0.0 6 1.353212933467933E-4 0.0 0.0 0.6335742954496862 0.0 7 1.353212933467933E-4 0.0 0.0 0.8216708932017288 0.0 8 1.353212933467933E-4 0.0 0.0 1.1067928582834223 0.0 9 1.353212933467933E-4 0.0 0.0 1.2957013837955458 0.0 10 2.706425866935866E-4 0.0 0.0 1.5197934455778355 0.0 11 2.706425866935866E-4 0.0 0.0 1.6790666078470111 0.0 12 2.706425866935866E-4 0.0 0.0 1.8170943270607403 0.0 13 4.059638800403799E-4 0.0 0.0 1.9145256582704315 0.0 14 4.059638800403799E-4 0.0 0.0 1.992741365824878 0.0 15 4.059638800403799E-4 0.0 0.0 2.0520120923107736 0.0 16 4.059638800403799E-4 0.0 0.0 2.1154777788904195 0.0 17 4.059638800403799E-4 0.0 0.0 2.1827324616837758 0.0 18 4.059638800403799E-4 0.0 0.0 2.263789916398505 0.0 19 4.059638800403799E-4 0.0 0.0 2.3288794584983123 0.0 20 4.059638800403799E-4 0.0 0.0 2.399787816212032 0.0 21 4.059638800403799E-4 0.0 0.0 2.4794920579932933 0.0 22 4.059638800403799E-4 0.0 0.0 2.564203187628386 0.0 23 4.059638800403799E-4 0.0 0.0 2.658522129091101 0.0 24 4.059638800403799E-4 0.0 0.0 2.7320015913784097 0.0 25 4.059638800403799E-4 0.0 0.0 2.811029226692937 0.0 26 4.059638800403799E-4 0.0 0.0 2.887485757433875 0.0 27 4.059638800403799E-4 0.0 0.0 2.9704377102554593 0.0 28 4.059638800403799E-4 0.0 0.0 3.051359843676842 0.0 29 4.059638800403799E-4 0.0 0.0 3.144460893499436 0.0 30 4.059638800403799E-4 0.0 0.0 3.2539358198169914 0.0 31 4.059638800403799E-4 0.0 0.0 3.3546148620670055 0.0 32 4.059638800403799E-4 0.0 0.0 3.4685553910650055 0.0 33 4.059638800403799E-4 0.0 0.0 3.567745899088205 0.0 34 4.059638800403799E-4 0.0 0.0 3.671807973671889 0.0 35 4.059638800403799E-4 0.0 0.0 3.7838540045630342 0.0 36 4.059638800403799E-4 0.0 0.0 3.895223428987445 0.0 37 4.059638800403799E-4 0.0 0.0 4.007810745051977 0.0 38 4.059638800403799E-4 0.0 0.0 4.144755893918932 0.0 39 4.059638800403799E-4 0.0 0.0 4.326898354763715 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAA 25 3.8894486E-5 45.0 9 CGTTTTT 7865 0.0 43.254925 1 CGGGTAT 70 0.0 41.785717 6 CGTAAGG 65 0.0 41.538464 2 TACGCGG 60 3.6379788E-12 41.250004 2 TACGGGA 290 0.0 39.568966 4 ACGTTAG 40 3.455989E-7 39.375 1 AATACGG 40 3.455989E-7 39.375 2 TATCCGG 40 3.455989E-7 39.375 2 GGGCGAT 1375 0.0 39.10909 7 TTGGGCG 190 0.0 39.078945 5 TTAGGGA 1160 0.0 38.98707 4 ACGGGAT 405 0.0 38.88889 5 TAAGGGA 970 0.0 38.737114 4 ACACGAC 100 0.0 38.25 26 CGTTAGG 100 0.0 38.25 2 GTTTTTT 9220 0.0 38.142624 2 AGGGATC 820 0.0 38.140244 6 TGCGATG 30 1.1395272E-4 37.500004 1 GCGATAA 30 1.1395272E-4 37.500004 9 >>END_MODULE