##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547317_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1633676 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.366079932618216 31.0 31.0 33.0 30.0 34.0 2 31.76960486657085 31.0 31.0 34.0 30.0 34.0 3 31.770912347368757 31.0 31.0 34.0 30.0 34.0 4 35.59988822753104 37.0 35.0 37.0 33.0 37.0 5 35.54314074516611 37.0 35.0 37.0 33.0 37.0 6 35.58081957499529 37.0 35.0 37.0 33.0 37.0 7 35.94727351078182 37.0 35.0 37.0 35.0 37.0 8 35.95108944490829 37.0 35.0 37.0 35.0 37.0 9 37.696263518592424 39.0 37.0 39.0 35.0 39.0 10 37.05946772799503 39.0 37.0 39.0 33.0 39.0 11 36.75988445689353 39.0 37.0 39.0 32.0 39.0 12 36.5421001471528 39.0 35.0 39.0 32.0 39.0 13 36.45953787654345 39.0 35.0 39.0 32.0 39.0 14 37.57314975552068 40.0 36.0 41.0 32.0 41.0 15 37.65377222900992 40.0 36.0 41.0 32.0 41.0 16 37.71807078025263 40.0 36.0 41.0 32.0 41.0 17 37.6078800202733 40.0 36.0 41.0 32.0 41.0 18 37.40119950345111 39.0 36.0 41.0 32.0 41.0 19 37.26354491343449 39.0 36.0 41.0 32.0 41.0 20 37.061392834319655 39.0 35.0 41.0 32.0 41.0 21 36.93015995827814 39.0 35.0 41.0 31.0 41.0 22 36.839799935850195 38.0 35.0 41.0 31.0 41.0 23 36.71648295010761 38.0 35.0 40.0 31.0 41.0 24 36.57408568161618 38.0 35.0 40.0 31.0 41.0 25 36.445322083448616 38.0 35.0 40.0 31.0 41.0 26 36.24722099118797 38.0 35.0 40.0 30.0 41.0 27 36.23497254045478 38.0 35.0 40.0 30.0 41.0 28 36.23018334112761 38.0 35.0 40.0 30.0 41.0 29 36.221701243086144 38.0 35.0 40.0 30.0 41.0 30 36.142735768904 38.0 35.0 40.0 30.0 41.0 31 36.02343793995872 38.0 35.0 40.0 30.0 41.0 32 35.76978421669903 38.0 35.0 40.0 29.0 41.0 33 35.466018965816964 38.0 34.0 40.0 27.0 41.0 34 35.108564366496175 38.0 34.0 40.0 24.0 41.0 35 34.84017271478555 38.0 34.0 40.0 23.0 41.0 36 34.564888631527914 38.0 33.0 40.0 23.0 41.0 37 34.50935007920787 38.0 33.0 40.0 22.0 41.0 38 34.39718157088676 38.0 33.0 40.0 22.0 41.0 39 34.243546455968016 38.0 33.0 40.0 21.0 41.0 40 34.130227168667474 37.0 33.0 40.0 21.0 41.0 41 34.0842884390785 37.0 33.0 40.0 21.0 41.0 42 33.98053102328736 37.0 33.0 40.0 20.0 41.0 43 33.86203690327825 37.0 33.0 40.0 20.0 41.0 44 33.7382057396938 37.0 33.0 40.0 19.0 41.0 45 33.58647614337237 36.0 33.0 40.0 20.0 41.0 46 33.50082084819756 36.0 33.0 40.0 19.0 41.0 47 33.4546831807531 36.0 33.0 40.0 19.0 41.0 48 33.33242882921705 36.0 32.0 40.0 18.0 41.0 49 33.20983597726844 36.0 32.0 40.0 18.0 41.0 50 33.09710187332127 35.0 32.0 40.0 18.0 41.0 51 32.64076046902813 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 0.0 11 1.0 12 3.0 13 11.0 14 20.0 15 51.0 16 181.0 17 416.0 18 946.0 19 1800.0 20 3138.0 21 4874.0 22 7528.0 23 11333.0 24 16342.0 25 24645.0 26 34415.0 27 39178.0 28 40480.0 29 41234.0 30 45136.0 31 52110.0 32 62117.0 33 78399.0 34 114789.0 35 144713.0 36 143605.0 37 171763.0 38 239544.0 39 354794.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.44976360061603 22.397525580347633 25.951963547239476 19.200747271796857 2 36.134582377411434 23.853873105805555 26.50911196589777 13.502432550885244 3 27.617593696669353 24.201371630604847 35.19002543956085 12.99100923316496 4 23.751343595670132 27.250874714447665 34.67064460762109 14.32713708226111 5 22.120114392327487 30.855995925752723 33.34014823012642 13.683741451793379 6 21.633298157039707 39.02303761578183 29.774692166623 9.568972060555458 7 85.11240907009713 2.597516276177161 10.950029259167668 1.3400453945580397 8 85.33681097108607 2.2672182244214887 11.119585523690132 1.2763852808023133 9 80.46216018353701 4.751921433625761 12.509395987943753 2.2765223948934796 10 37.46501754325827 34.564932091797886 17.60336810971086 10.366682255232984 11 27.130961096325095 26.096178189555335 30.351979217421327 16.420881496698243 12 25.55941324962844 23.133044740817642 32.781530731919915 18.526011277633998 13 23.480543265616927 25.018730764239667 33.37381463643953 18.12691133370387 14 20.859888986555475 26.45059363056077 33.58701480587338 19.102502577010373 15 19.946549989104327 24.74976678362172 36.79444394114867 18.50923928612528 16 23.60608835534096 24.305492643584163 34.37823656587965 17.71018243519523 17 23.402682049561847 24.16531797002588 32.576349288353384 19.85565069205889 18 23.37250470717572 24.312409559790314 33.598400172372 18.716685560661965 19 24.739911708319156 25.994689277433224 30.824716773705436 18.440682240542188 20 26.170489130035573 26.187812026374875 30.54112320925324 17.100575634336305 21 25.49728342706877 25.492508918537087 31.89206427712716 17.11814337726697 22 24.99192006248485 23.690805275954354 31.624997857592323 19.692276803968472 23 22.59530041452528 26.594747061228784 31.72752736772775 19.082425156518184 24 21.580533716599863 25.780326086690387 34.132349376498155 18.506790820211595 25 22.05645427857176 27.02518736885404 31.904367818343417 19.013990534230775 26 21.64358171387717 27.566971663903985 30.718086083164593 20.071360539054258 27 20.50290265634067 26.718210954926192 32.214343603015536 20.56454278571761 28 19.818678856762297 27.153303347787443 33.58768813399964 19.44032966145062 29 21.08306665458757 25.54429397261146 33.06487944978074 20.30775992302023 30 21.23542244606642 26.22178449092721 33.33335373721595 19.209439325790427 31 23.161324522120665 26.317703143095695 30.96134117168888 19.559631163094764 32 23.245674172847004 26.431495596434058 30.861321339114976 19.461508891603966 33 22.894319314233666 26.618252334000132 30.014090921333235 20.473337430432963 34 21.00765390444617 28.35513284151815 30.960055727084196 19.67715752695149 35 21.677186908542453 28.772106586618158 30.471097084121944 19.07960942071745 36 22.985279822926945 29.25280165712173 28.388982882774798 19.37293563717653 37 22.088957663575886 29.241844772158004 28.457968409892782 20.211229154373328 38 22.064166946199858 29.229051537759016 28.838827282765983 19.867954233275142 39 21.7864496999405 28.73060508938125 28.331688780394643 21.151256430283606 40 23.253264417179416 27.47943900748986 28.96571902874254 20.301577546588184 41 21.16313148996496 27.871132342031103 29.05404743657861 21.911688731425325 42 21.943947269838084 27.69478158459817 28.300593263290885 22.060677882272863 43 21.762577157282102 27.39894569057757 28.984755851221415 21.85372130091891 44 21.740112482524072 27.69239433033233 29.382264292307653 21.18522889483594 45 21.239217568232625 28.078456193272107 28.59600067577659 22.086325562718677 46 21.876247187324783 28.336769347165536 28.78612405397398 21.000859411535703 47 21.377861950594852 28.18551536534784 29.847901297442085 20.588721386615216 48 21.299817099596247 27.713451137189992 30.122925231196398 20.863806532017364 49 21.602386274879475 27.497374020307575 29.657716707596855 21.242522997216096 50 20.840423682541704 28.486921519322067 29.995298945445732 20.677355852690496 51 20.761093386938416 27.96337829532906 29.84526919658488 21.430259121147646 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1348.0 1 2110.5 2 2873.0 3 22991.5 4 43110.0 5 28892.0 6 14674.0 7 14696.0 8 14718.0 9 15564.0 10 16410.0 11 17234.5 12 18059.0 13 17946.0 14 17833.0 15 16573.0 16 15313.0 17 14452.0 18 13591.0 19 12815.0 20 12039.0 21 11857.0 22 11675.0 23 11978.5 24 12282.0 25 13276.0 26 15380.0 27 16490.0 28 19858.0 29 23226.0 30 27759.5 31 32293.0 32 35405.0 33 38517.0 34 43463.5 35 48410.0 36 51694.5 37 54979.0 38 60556.0 39 66133.0 40 72229.5 41 78326.0 42 84451.0 43 90576.0 44 96231.0 45 101886.0 46 103567.5 47 105249.0 48 104694.5 49 104140.0 50 102375.5 51 100611.0 52 97843.5 53 95076.0 54 90375.0 55 85674.0 56 81276.5 57 76879.0 58 72561.5 59 68244.0 60 64288.5 61 60333.0 62 55440.5 63 50548.0 64 45367.5 65 40187.0 66 35531.5 67 30876.0 68 25732.5 69 20589.0 70 16680.5 71 12772.0 72 10869.5 73 8967.0 74 7627.5 75 5120.0 76 3952.0 77 3042.5 78 2133.0 79 1670.5 80 1208.0 81 862.5 82 517.0 83 373.0 84 229.0 85 171.0 86 113.0 87 69.5 88 26.0 89 21.5 90 17.0 91 14.0 92 11.0 93 7.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1633676.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.769844615558352 #Duplication Level Percentage of deduplicated Percentage of total 1 75.41443776978568 20.188327808668575 2 5.892359856716812 3.1547511556652545 3 2.656808586648966 2.1336705911362204 4 1.7056466017852034 1.8263957799538009 5 1.2756558016000008 1.7074553795883776 6 0.9889728940973498 1.588479042239106 7 0.8551335969864164 1.6024255461808905 8 0.7612654044473752 1.6303165270605133 9 0.7087669130377567 1.7076222117602735 >10 9.338290461788091 54.89489120324449 >50 0.375405326433383 6.105160682120173 >100 0.025639859232370384 1.2775230788706957 >500 0.0011549481718458121 0.22341190067579889 >1k 2.3098963436916245E-4 0.15353771087130047 >5k 0.0 0.0 >10k+ 2.3098963436916245E-4 1.8060313819645883 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29207 1.7878085985225958 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2483 0.15198852159179665 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01915924577455995 0.0 2 0.0 0.0 0.0 0.05264201714415833 0.0 3 0.0 0.0 0.0 0.10020346751742695 0.0 4 0.0 0.0 0.0 0.153824871027058 0.0 5 0.0 0.0 0.0 0.2601495033286894 0.0 6 0.0 0.0 0.0 0.5278280393419503 0.0 7 0.0 0.0 0.0 0.6883861916316332 0.0 8 6.121164784204457E-5 0.0 0.0 0.9349467091393887 0.0 9 6.121164784204457E-5 0.0 0.0 1.0945254750635989 0.0 10 6.121164784204457E-5 0.0 0.0 1.2738143915929474 0.0 11 6.121164784204457E-5 0.0 0.0 1.4221302143142214 0.0 12 6.121164784204457E-5 0.0 0.0 1.5472468225033604 0.0 13 6.121164784204457E-5 0.0 0.0 1.6295764888509106 0.0 14 6.121164784204457E-5 0.0 0.0 1.6873602844138005 0.0 15 6.121164784204457E-5 0.0 0.0 1.730575707790284 0.0 16 6.121164784204457E-5 0.0 0.0 1.7815650104427072 0.0 17 6.121164784204457E-5 0.0 0.0 1.841736060271437 0.0 18 6.121164784204457E-5 0.0 0.0 1.910293105854527 0.0 19 6.121164784204457E-5 0.0 0.0 1.9610987735634238 0.0 20 6.121164784204457E-5 0.0 0.0 2.0156995634385275 0.0 21 6.121164784204457E-5 0.0 0.0 2.080645121798937 0.0 22 6.121164784204457E-5 0.0 0.0 2.1558130253489676 0.0 23 6.121164784204457E-5 0.0 0.0 2.237836633457307 0.0 24 6.121164784204457E-5 0.0 0.0 2.30737306540587 0.0 25 6.121164784204457E-5 0.0 0.0 2.3725634703576475 0.0 26 6.121164784204457E-5 0.0 0.0 2.4345096579737966 0.0 27 6.121164784204457E-5 0.0 0.0 2.5004346026996784 0.0 28 6.121164784204457E-5 0.0 0.0 2.569726188056873 0.0 29 6.121164784204457E-5 0.0 0.0 2.644037128537115 0.0 30 6.121164784204457E-5 0.0 0.0 2.7439345378153317 0.0 31 6.121164784204457E-5 0.0 0.0 2.826325415810724 0.0 32 6.121164784204457E-5 0.0 0.0 2.9256719202583623 0.0 33 6.121164784204457E-5 0.0 0.0 3.016265159064588 0.0 34 6.121164784204457E-5 0.0 0.0 3.1030020640567653 0.0 35 6.121164784204457E-5 0.0 0.0 3.1984922346903546 0.0 36 6.121164784204457E-5 0.0 0.0 3.2927581723671033 0.0 37 6.121164784204457E-5 0.0 0.0 3.3916761952798473 0.0 38 6.121164784204457E-5 0.0 0.0 3.5084680193624687 0.0 39 6.121164784204457E-5 0.0 0.0 3.6607013875456333 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 13840 0.0 43.130417 1 TACGGGA 565 0.0 40.61947 4 TAGGGAC 1765 0.0 38.243626 5 TTAGGGA 2120 0.0 37.570755 4 ATAGGGA 2280 0.0 37.5 4 TAGGGAT 2255 0.0 37.317074 5 GGGCGAT 3525 0.0 37.085106 7 TAAGGGA 2290 0.0 37.041485 4 TACGAAT 140 0.0 36.964283 12 ACACGAC 715 0.0 36.81818 26 ACGGGAC 495 0.0 36.81818 5 AGGGATC 1710 0.0 36.578945 6 GACCGAT 900 0.0 36.5 9 ACGGGAT 635 0.0 36.496063 5 AGGGCGA 1870 0.0 36.45722 6 GTTTTTT 16995 0.0 36.35481 2 GACACGA 725 0.0 36.310345 25 CACGACC 730 0.0 36.061646 27 AGGGATT 2765 0.0 36.048824 6 CGAACCG 25 0.0021073679 36.0 12 >>END_MODULE