##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547316_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1832872 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25899571819527 31.0 31.0 33.0 30.0 34.0 2 31.639732070761077 31.0 31.0 34.0 30.0 34.0 3 31.640867992964047 31.0 31.0 34.0 30.0 34.0 4 35.455931456206436 37.0 35.0 37.0 33.0 37.0 5 35.367626326333756 37.0 35.0 37.0 33.0 37.0 6 35.41018958225124 37.0 35.0 37.0 33.0 37.0 7 35.88756716235503 37.0 35.0 37.0 35.0 37.0 8 35.90363156838011 37.0 35.0 37.0 35.0 37.0 9 37.654978634623696 39.0 37.0 39.0 35.0 39.0 10 36.89340063026769 39.0 37.0 39.0 32.0 39.0 11 36.5923626963585 39.0 35.0 39.0 32.0 39.0 12 35.98769035699165 37.0 35.0 39.0 31.0 39.0 13 35.63489976386785 37.0 35.0 39.0 30.0 39.0 14 36.7060138405737 39.0 35.0 41.0 31.0 41.0 15 36.97841147663339 39.0 35.0 41.0 31.0 41.0 16 37.13819841210952 39.0 35.0 41.0 32.0 41.0 17 37.06605153005775 38.0 35.0 41.0 32.0 41.0 18 36.91435899506349 38.0 35.0 40.0 32.0 41.0 19 36.762041211824936 38.0 35.0 40.0 31.0 41.0 20 36.520147069735366 38.0 35.0 40.0 31.0 41.0 21 36.378795682404444 38.0 35.0 40.0 31.0 41.0 22 36.27648193654549 38.0 35.0 40.0 31.0 41.0 23 36.20176149780236 37.0 35.0 40.0 31.0 41.0 24 36.084378505427544 37.0 35.0 40.0 31.0 41.0 25 36.001722433426885 37.0 35.0 40.0 30.0 41.0 26 35.74958807816367 37.0 34.0 40.0 30.0 41.0 27 35.67785748268292 37.0 34.0 40.0 30.0 41.0 28 35.708801269264846 37.0 34.0 40.0 30.0 41.0 29 35.71694913774666 37.0 34.0 40.0 30.0 41.0 30 35.63797744741586 37.0 34.0 40.0 30.0 41.0 31 35.481254010099995 37.0 34.0 40.0 29.0 41.0 32 35.19813767682631 37.0 34.0 40.0 27.0 41.0 33 34.89236946169727 37.0 34.0 40.0 25.0 41.0 34 34.608363813730584 37.0 34.0 40.0 24.0 41.0 35 34.38064305636182 37.0 33.0 40.0 23.0 41.0 36 34.07617225861926 36.0 33.0 40.0 22.0 41.0 37 34.00350651873126 36.0 33.0 40.0 22.0 41.0 38 33.965912513257884 36.0 33.0 40.0 22.0 41.0 39 33.85528558459074 36.0 33.0 40.0 21.0 41.0 40 33.71496536583024 36.0 33.0 40.0 20.0 41.0 41 33.744870345556045 36.0 33.0 40.0 21.0 41.0 42 33.65008467585298 36.0 33.0 40.0 20.0 41.0 43 33.52158797777477 36.0 33.0 40.0 19.0 41.0 44 33.412205544086 35.0 33.0 40.0 18.0 41.0 45 33.23611523336054 35.0 32.0 40.0 18.0 41.0 46 33.15601689588798 35.0 32.0 40.0 18.0 41.0 47 33.12149511804425 35.0 32.0 40.0 18.0 41.0 48 33.021830220550044 35.0 32.0 40.0 18.0 41.0 49 32.8875229694163 35.0 32.0 39.0 18.0 41.0 50 32.72501680422855 35.0 32.0 39.0 18.0 41.0 51 32.29699073366825 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 2.0 13 5.0 14 21.0 15 69.0 16 181.0 17 535.0 18 1266.0 19 2430.0 20 4127.0 21 6578.0 22 9920.0 23 14243.0 24 21062.0 25 30579.0 26 41055.0 27 46226.0 28 46888.0 29 49756.0 30 55470.0 31 64927.0 32 78060.0 33 98419.0 34 156746.0 35 225876.0 36 141629.0 37 160347.0 38 225650.0 39 350688.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.572020304745777 24.105720421284193 27.840842131911014 17.48141714205902 2 32.9739338044337 25.100388897860842 28.961706000200778 12.963971297504681 3 26.729144206469407 24.571819526950055 35.28516994094514 13.413866325635396 4 22.999151059102875 27.434321654758214 35.13889676965986 14.427630516479056 5 21.234325146545967 31.440384271242074 34.08994190538128 13.23534867683068 6 19.704976670493085 39.998756050613466 30.41630839469423 9.879958884199223 7 85.2548350348524 3.1165842459266115 10.475254136677302 1.15332658254368 8 85.77707554046327 2.4683665853371104 10.041563186081733 1.7129946881178828 9 81.60171577720648 4.616416203641062 11.734043621158488 2.047824397993968 10 40.81823498858622 29.575824171027765 18.20187116176143 11.404069678624584 11 34.2325050521804 22.313669476100895 28.54525575162914 14.908569720089565 12 31.78437992396632 21.760930386846436 31.04242958591762 15.412260103269624 13 19.639833005250775 34.954759524942276 31.04854021448306 14.356867255323886 14 15.469874601172368 36.69066907018057 31.34697894888459 16.49247737976247 15 14.455401140941648 26.06766866426024 44.496942503349935 14.979987691448176 16 15.697713751969586 22.751670602202445 44.144326499613726 17.406289146214245 17 15.820908388583598 24.46308307399535 31.50029025485686 28.215718282564197 18 19.269976299490637 24.98259562042521 36.56649236826139 19.18093571182276 19 23.326833515924736 27.614039605602574 29.404726571195372 19.654400307277324 20 25.80703944410739 25.453714170984114 30.30631708051626 18.432929304392232 21 19.89729779275367 30.272654064222703 32.11359003792955 17.716458105094084 22 22.113055357930065 25.372530105757523 29.710858150487322 22.80355638582509 23 17.3404907707685 30.294859651956056 29.6606637015569 22.703985875718544 24 17.337817370771116 26.688224818754392 39.3825100716253 16.591447738849194 25 16.388214779864608 28.36433749874514 35.86737098935441 19.380076732035842 26 17.41152682784177 33.782118991397105 30.305826047863683 18.500528132897443 27 16.784478130496836 34.254110488893936 31.28898253669651 17.672428843912723 28 15.863901025276178 29.865042403397506 37.15895054319123 17.11210602813508 29 16.223227808597652 25.975136288840684 36.87404248632747 20.927593416234195 30 17.262798493293584 31.898081262630452 33.66672631804076 17.172393926035205 31 23.855020972550182 28.989749420581468 29.180924799986034 17.974304806882312 32 24.202617531393354 28.541218372041254 30.427711264070812 16.828452832494577 33 23.41489203828745 29.75210489330406 28.99596916751415 17.837033900894333 34 19.133851136358675 29.365498518172572 30.290549476450074 21.210100869018678 35 18.721983859211118 28.861699016625273 31.647490932263683 20.768826191899926 36 25.04582971424082 28.722191184108876 28.77718684119786 17.454792260452447 37 18.31278998206094 32.566976853811944 31.355162826427595 17.765070337699523 38 18.91692382228546 33.707863942490256 28.03938300110428 19.335829234120002 39 18.277271953524306 32.85843201271011 29.990855880825286 18.873440152940304 40 21.58252185640896 29.879446027873197 28.241361098865603 20.29667101685224 41 17.06442130165118 27.74983741363281 30.396994443692737 24.78874684102327 42 19.470590417661462 28.817833432994778 28.669814367833652 23.04176178151011 43 19.6009323073297 29.664919317879264 29.027067902177567 21.70708047261347 44 18.298059002483534 31.858634972873173 29.105960481692122 20.73734554295117 45 17.011116979254414 35.95963056885587 26.136194998886992 20.89305745300272 46 20.139704245577434 33.53458397531306 27.59979965867775 18.725912120431758 47 19.32857286269854 30.071385235848442 29.131330502075432 21.46871139937759 48 20.001778629386013 28.957668620612896 30.679174541375502 20.361378208625588 49 19.798873025503145 27.777989952380743 31.79932914027821 20.6238078818379 50 18.387481504436753 32.64390530271618 29.97694328900218 18.991669903844898 51 17.218387317826885 33.17973104504843 27.619713760699057 21.98216787642563 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2511.0 1 2799.0 2 3087.0 3 20881.0 4 38675.0 5 26282.5 6 13890.0 7 14404.0 8 14918.0 9 16881.5 10 18845.0 11 20076.5 12 21308.0 13 21227.0 14 21146.0 15 19882.5 16 18619.0 17 17324.0 18 16029.0 19 15934.5 20 15840.0 21 15881.0 22 15922.0 23 16278.5 24 16635.0 25 16964.0 26 19718.5 27 22144.0 28 26164.5 29 30185.0 30 33843.5 31 37502.0 32 43071.0 33 48640.0 34 55128.5 35 61617.0 36 65548.5 37 69480.0 38 74472.5 39 79465.0 40 98909.5 41 118354.0 42 136023.5 43 153693.0 44 165693.0 45 177693.0 46 170405.0 47 163117.0 48 150796.0 49 138475.0 50 130319.0 51 122163.0 52 111263.0 53 100363.0 54 88197.5 55 76032.0 56 67966.5 57 59901.0 58 50918.5 59 41936.0 60 37535.5 61 33135.0 62 27936.5 63 22738.0 64 19227.5 65 15717.0 66 12292.5 67 8868.0 68 7571.5 69 6275.0 70 5310.5 71 4346.0 72 3445.5 73 2545.0 74 2145.0 75 1425.0 76 1105.0 77 784.0 78 463.0 79 319.0 80 175.0 81 162.0 82 149.0 83 110.5 84 72.0 85 51.0 86 30.0 87 26.5 88 23.0 89 14.0 90 5.0 91 3.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1832872.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.89984340498367 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0448921012806 20.99050014196965 2 7.722825241789745 4.0003992881281905 3 2.720665073430579 2.1139439807778118 4 1.4767779527903493 1.5299327088480965 5 0.9651807079272259 1.2499014596413216 6 0.6691170527530917 1.0398016131545562 7 0.4953182839932511 0.8980066193735302 8 0.37458626450812155 0.7761380473934512 9 0.30525379770936134 0.711542300350412 >10 2.5299682484369477 14.217187638169465 >50 0.8337971425170068 15.805073478382006 >100 0.8577887189899382 34.22214955166147 >500 0.0027656877977125676 0.45904374500760675 >1k 8.509808608346362E-4 0.47221280695176926 >5k 0.0 0.0 >10k+ 2.1274521520865905E-4 1.5141666201907373 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27480 1.49928636587825 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4112 0.2243473630455373 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1935 0.10557202030474577 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0911836724004731E-4 0.0 0.0 0.07300018768359165 0.0 2 1.0911836724004731E-4 0.0 0.0 0.24900811404178796 0.0 3 1.0911836724004731E-4 0.0 0.0 0.35419822006119356 0.0 4 1.0911836724004731E-4 0.0 0.0 0.5523026157854994 0.0 5 1.0911836724004731E-4 0.0 0.0 0.9207407827715193 0.0 6 1.0911836724004731E-4 0.0 0.0 1.4495283904167886 0.0 7 1.0911836724004731E-4 0.0 0.0 1.7154498513807839 0.0 8 1.0911836724004731E-4 0.0 0.0 2.315928226302764 0.0 9 1.0911836724004731E-4 0.0 0.0 2.517797205696852 0.0 10 1.0911836724004731E-4 0.0 0.0 2.8904909890052335 0.0 11 1.0911836724004731E-4 0.0 0.0 3.342513825297129 0.0 12 1.0911836724004731E-4 0.0 0.0 3.679143988232675 0.0 13 1.0911836724004731E-4 0.0 0.0 3.8501324696978294 0.0 14 1.0911836724004731E-4 0.0 0.0 3.9283703390089433 0.0 15 1.6367755086007098E-4 0.0 0.0 4.028922914420647 0.0 16 1.6367755086007098E-4 0.0 0.0 4.261345036641948 0.0 17 1.6367755086007098E-4 0.0 0.0 4.545980297587612 0.0 18 1.6367755086007098E-4 0.0 0.0 4.8728989258387925 0.0 19 1.6367755086007098E-4 0.0 0.0 5.056599697087413 0.0 20 1.6367755086007098E-4 0.0 0.0 5.229934223448228 0.0 21 1.6367755086007098E-4 0.0 0.0 5.493891553801902 0.0 22 1.6367755086007098E-4 0.0 0.0 5.769197194348542 0.0 23 1.6367755086007098E-4 0.0 0.0 6.109646500137489 0.0 24 1.6367755086007098E-4 0.0 0.0 6.3504161774526535 0.0 25 1.6367755086007098E-4 0.0 0.0 6.562433165000066 0.0 26 1.6367755086007098E-4 0.0 0.0 6.760592119907991 0.0 27 1.6367755086007098E-4 0.0 0.0 6.957332536041797 0.0 28 1.6367755086007098E-4 0.0 0.0 7.163402572574626 0.0 29 1.6367755086007098E-4 0.0 0.0 7.385131094806402 0.0 30 1.6367755086007098E-4 0.0 0.0 7.660436735353041 0.0 31 1.6367755086007098E-4 0.0 0.0 7.91053603306723 0.0 32 1.6367755086007098E-4 0.0 0.0 8.143940220593691 0.0 33 1.6367755086007098E-4 0.0 0.0 8.377780881589112 0.0 34 1.6367755086007098E-4 0.0 0.0 8.612276252787975 0.0 35 1.6367755086007098E-4 0.0 0.0 8.899312117812919 0.0 36 1.6367755086007098E-4 0.0 0.0 9.137462954314323 0.0 37 1.6367755086007098E-4 0.0 0.0 9.392854492839653 0.0 38 2.1823673448009463E-4 0.0 0.0 9.655120488501106 0.0 39 2.1823673448009463E-4 0.0 0.0 9.938391769856269 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGAG 65 0.0 45.000004 1 CGTATTG 20 7.0343877E-4 45.0 13 GCGCATC 20 7.0343877E-4 45.0 28 ACTTACG 40 6.8193913E-9 45.0 1 CCTCGAC 20 7.0343877E-4 45.0 22 GTTACGT 25 3.891717E-5 45.0 19 CGCTAAT 25 3.891717E-5 45.0 35 CGGCTCG 20 7.0343877E-4 45.0 20 ACCCGTG 20 7.0343877E-4 45.0 38 GCTCGAT 25 3.891717E-5 45.0 32 TAATGCG 55 1.8189894E-12 45.0 1 TCGAATA 25 3.891717E-5 45.0 21 TACGTAC 35 1.2124656E-7 45.0 13 CGTTTTT 14295 0.0 43.740818 1 CGGTCTA 260 0.0 43.269234 31 CGACGGT 245 0.0 42.2449 28 TTAGCGG 370 0.0 41.351353 2 GCTACGA 180 0.0 41.250004 10 CGTAAGG 225 0.0 41.0 2 TCGTCCC 600 0.0 40.875 38 >>END_MODULE