##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547315_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1939054 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27149011837731 31.0 31.0 33.0 30.0 34.0 2 31.67485691476359 31.0 31.0 34.0 30.0 34.0 3 31.764276291428708 31.0 31.0 34.0 30.0 34.0 4 35.56827298259873 37.0 35.0 37.0 33.0 37.0 5 35.46070764403673 37.0 35.0 37.0 33.0 37.0 6 35.491399414353594 37.0 35.0 37.0 33.0 37.0 7 35.87738402334334 37.0 35.0 37.0 35.0 37.0 8 35.86610842194183 37.0 35.0 37.0 35.0 37.0 9 37.59049670612577 39.0 37.0 39.0 35.0 39.0 10 36.887075347050676 39.0 37.0 39.0 32.0 39.0 11 36.604564390677105 39.0 35.0 39.0 32.0 39.0 12 36.154014277065 38.0 35.0 39.0 31.0 39.0 13 35.96200105824799 38.0 35.0 39.0 31.0 39.0 14 37.02894297941161 39.0 35.0 41.0 31.0 41.0 15 37.198804674856916 39.0 35.0 41.0 32.0 41.0 16 37.290891847261605 39.0 35.0 41.0 32.0 41.0 17 37.20067156458768 39.0 35.0 41.0 32.0 41.0 18 37.05065511326657 39.0 35.0 41.0 31.0 41.0 19 36.984151550188905 39.0 35.0 41.0 31.0 41.0 20 36.838498566826914 38.0 35.0 41.0 31.0 41.0 21 36.68925362573709 38.0 35.0 41.0 31.0 41.0 22 36.595558452730046 38.0 35.0 40.0 31.0 41.0 23 36.50799668291858 38.0 35.0 40.0 31.0 41.0 24 36.38428223247006 38.0 35.0 40.0 30.0 41.0 25 36.25399086358606 38.0 35.0 40.0 30.0 41.0 26 36.009982702905646 38.0 35.0 40.0 30.0 41.0 27 35.992227137562956 38.0 35.0 40.0 30.0 41.0 28 36.034254332267174 38.0 35.0 40.0 30.0 41.0 29 36.03520067001744 38.0 35.0 40.0 30.0 41.0 30 36.011055906643136 38.0 35.0 40.0 30.0 41.0 31 35.91880886246592 38.0 35.0 40.0 30.0 41.0 32 35.74088240966987 38.0 34.0 40.0 29.0 41.0 33 35.553607068188924 38.0 34.0 40.0 27.0 41.0 34 35.339927614187125 38.0 34.0 40.0 27.0 41.0 35 35.21045210705839 38.0 34.0 40.0 26.0 41.0 36 34.9801655858991 38.0 34.0 40.0 25.0 41.0 37 34.93752314272836 38.0 34.0 40.0 25.0 41.0 38 34.85469718739138 38.0 34.0 40.0 24.0 41.0 39 34.69833279527027 37.0 33.0 40.0 24.0 41.0 40 34.57244357300003 37.0 33.0 40.0 23.0 41.0 41 34.5395166921602 37.0 33.0 40.0 23.0 41.0 42 34.44324448932314 37.0 33.0 40.0 23.0 41.0 43 34.324436039429536 37.0 33.0 40.0 23.0 41.0 44 34.223094354257285 37.0 33.0 40.0 23.0 41.0 45 34.06331747336588 36.0 33.0 40.0 23.0 41.0 46 33.95917803217445 36.0 33.0 40.0 23.0 41.0 47 33.927857089075395 36.0 33.0 40.0 23.0 41.0 48 33.79110947915839 36.0 33.0 40.0 23.0 41.0 49 33.658859423203275 36.0 33.0 40.0 22.0 41.0 50 33.53617537211444 35.0 32.0 40.0 22.0 41.0 51 33.06066669623435 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 2.0 11 2.0 12 5.0 13 16.0 14 26.0 15 92.0 16 244.0 17 540.0 18 1238.0 19 2306.0 20 3934.0 21 5947.0 22 9093.0 23 12986.0 24 17982.0 25 24761.0 26 32523.0 27 38953.0 28 42221.0 29 48239.0 30 55630.0 31 66419.0 32 79816.0 33 101064.0 34 154267.0 35 195686.0 36 163063.0 37 200151.0 38 275775.0 39 405966.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.198067717557116 24.030068270404023 26.751962554936583 15.019901457102277 2 32.88077588349783 25.659316347043454 27.608565826428766 13.851341943029952 3 28.719571502392405 25.890820987966297 31.25622081695507 14.133386692686228 4 25.248136462419303 28.724934942502887 31.00032283783742 15.026605757240386 5 22.89162653541366 33.21506260269183 29.90839863149763 13.984912230396883 6 22.773269852206283 41.47800937983161 26.228563000308398 9.52015776765371 7 88.86596247448499 2.9523674946649243 6.882428235624176 1.2992417952259194 8 88.98684616312903 2.660730438657201 6.797696196186388 1.5547272020273804 9 83.86357471220502 5.168963834942193 8.424468838928673 2.5429926139241092 10 41.58924919058469 30.83513919674233 15.200711274673115 12.37490033799987 11 34.2260710635186 24.682035673065318 24.111035587456563 16.980857675959516 12 31.20779514134212 22.046678431853884 28.10442617895118 18.64110024785282 13 24.68244824538151 26.958093998413656 29.72160651534202 18.637851240862812 14 21.11065498949488 28.549746422740164 30.72255852596163 19.617040061803333 15 20.25028699561745 24.621232827966626 36.438335394475864 18.69014478194006 16 23.36799284599604 22.84810015605548 34.3604149239784 19.423492073970092 17 23.892939546809938 23.659268901227094 28.77960077439824 23.668190777564728 18 24.336609501334156 24.63644643212618 31.046840366487988 19.980103700051675 19 27.366953163759234 24.915654747108643 27.56859788329773 20.148794205834392 20 28.364037308914554 25.353497117666656 27.192125644773174 19.090339928645616 21 26.278484250567548 26.03857344870231 29.2175462880353 18.46539601269485 22 25.974779454311225 23.65571046499994 28.437475181196604 21.932034899492226 23 24.279674521699757 26.036613730200397 28.40457253898035 21.2791392091195 24 23.338287639230266 24.746345382851636 31.909838508881133 20.005528469036964 25 22.766152979751983 25.81913654802806 29.970439193544895 21.444271278675064 26 21.8858268000788 28.556192865180652 27.956828432833742 21.601151901906807 27 21.457731450490805 27.774007325221472 29.585045078682697 21.183216145605023 28 20.629234668039157 27.399340090580253 31.500824628916984 20.470600612463606 29 21.709916278762737 25.49129627127455 31.404179563849176 21.394607886113537 30 22.585962020655433 26.907605461219745 29.827328171366034 20.67910434675878 31 25.409606952668675 26.493279712684636 27.265563517055224 20.831549817591466 32 26.31520318670857 26.149452258678718 27.475717540615165 20.059627013997545 33 25.441168734857307 26.622621133810608 27.19645765409318 20.739752477238902 34 22.97806043565574 26.74206081934799 28.64964049479798 21.630238250198293 35 22.320781164423476 27.812221836008693 28.663874239706576 21.20312275986125 36 25.4629319245364 27.376287612413066 26.34026695491719 20.82051350813335 37 23.24030171413483 29.753323012149224 26.800903945944775 20.20547132777117 38 22.911636292748938 29.900353471331897 25.92738520948875 21.260625026430414 39 22.794414183411085 29.01729400006395 26.572906169709558 21.615385646815405 40 24.30999858693982 27.08965299573916 26.69559486223695 21.904753555084078 41 21.317560006064813 26.360379855331516 28.299469741430617 24.022590397173055 42 22.925302750722775 27.020856562014263 26.761193860511362 23.2926468267516 43 22.09964240294494 26.90182944879307 27.67241139235937 23.32611675590262 44 21.703727694019868 27.401609238319303 27.871271248763573 23.023391818897256 45 21.702541548610817 28.723078367080028 26.723495065119383 22.85088501918977 46 22.09525882208541 29.17020361475235 27.097491869746793 21.63704569341545 47 22.25755445696716 27.92609179527749 27.87797554890168 21.938378198853666 48 22.59065503075211 26.87490910516159 28.898576316079904 21.6358595480064 49 22.47276249140045 26.55392784316476 28.766914175675357 22.20639548975944 50 21.676807350388387 28.760313018616294 28.020158283369106 21.542721347626216 51 20.984717289977482 28.55913244293351 27.560088579276286 22.896061687812715 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1788.0 1 2736.0 2 3684.0 3 14872.0 4 26060.0 5 17719.0 6 9378.0 7 9564.0 8 9750.0 9 10731.5 10 11713.0 11 12309.5 12 12906.0 13 12731.0 14 12556.0 15 11854.5 16 11153.0 17 10507.0 18 9861.0 19 9500.0 20 9139.0 21 9438.0 22 9737.0 23 10449.0 24 11161.0 25 12901.0 26 17531.0 27 20421.0 28 21623.5 29 22826.0 30 27265.5 31 31705.0 32 36465.0 33 41225.0 34 46096.0 35 50967.0 36 57295.5 37 63624.0 38 69949.5 39 76275.0 40 84489.5 41 92704.0 42 105220.0 43 117736.0 44 124894.0 45 132052.0 46 134479.0 47 136906.0 48 136085.5 49 135265.0 50 128955.0 51 122645.0 52 118070.0 53 113495.0 54 110062.0 55 106629.0 56 104162.0 57 101695.0 58 97382.5 59 93070.0 60 88047.5 61 83025.0 62 76103.5 63 69182.0 64 62121.0 65 55060.0 66 46772.0 67 38484.0 68 33348.5 69 28213.0 70 23830.0 71 19447.0 72 16347.5 73 13248.0 74 11228.0 75 7158.5 76 5109.0 77 3830.0 78 2551.0 79 1880.0 80 1209.0 81 1001.5 82 794.0 83 587.0 84 380.0 85 305.0 86 230.0 87 152.5 88 75.0 89 62.5 90 50.0 91 30.0 92 10.0 93 8.0 94 6.0 95 4.5 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1939054.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.98135354093768 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30534786888278 17.652202427338988 2 5.697318652368242 2.504695510661699 3 2.0118551885955367 1.3266990052106504 4 1.1461250032803156 1.0077351559685188 5 0.7544571418407406 0.8291994583143343 6 0.5562033048437883 0.7335660890645548 7 0.4674602830849443 0.719278682418588 8 0.4043341232426562 0.7110249049329513 9 0.3402066194937652 0.6730381782053741 >10 5.971200947199702 33.68853500732556 >50 2.078322940428208 31.685969741362165 >100 0.26503626786727574 7.256756858541215 >500 0.0014211059147255145 0.22314224323429438 >1k 4.737019715751715E-4 0.12547195664830832 >5k 0.0 0.0 >10k+ 2.3685098578758574E-4 0.8626847807728086 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16570 0.8545404099112247 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.062861580956487E-4 0.0 0.0 0.013614886434312815 0.0 2 2.062861580956487E-4 0.0 0.0 0.05172625414248391 0.0 3 2.062861580956487E-4 0.0 0.0 0.07947174240634866 0.0 4 2.062861580956487E-4 0.0 0.0 0.12980556498168694 0.0 5 2.062861580956487E-4 0.0 0.0 0.22516134156140055 0.0 6 2.062861580956487E-4 0.0 0.0 0.416337038576543 0.0 7 2.062861580956487E-4 0.0 0.0 0.5123632451700675 0.0 8 2.5785769761956087E-4 0.0 0.0 0.7402063067867115 0.0 9 2.5785769761956087E-4 0.0 0.0 0.8516524036978856 0.0 10 2.5785769761956087E-4 0.0 0.0 1.014051181658685 0.0 11 2.5785769761956087E-4 0.0 0.0 1.1802146820047301 0.0 12 2.5785769761956087E-4 0.0 0.0 1.314661685543569 0.0 13 2.5785769761956087E-4 0.0 0.0 1.386346125481807 0.0 14 2.5785769761956087E-4 0.0 0.0 1.4243543501109304 0.0 15 2.5785769761956087E-4 0.0 0.0 1.4611248577914797 0.0 16 2.5785769761956087E-4 0.0 0.0 1.5359035901011524 0.0 17 2.5785769761956087E-4 0.0 0.0 1.6110948947270163 0.0 18 2.5785769761956087E-4 0.0 0.0 1.7053676689767279 0.0 19 2.5785769761956087E-4 0.0 0.0 1.7679239464192333 0.0 20 2.5785769761956087E-4 0.0 0.0 1.83563737781413 0.0 21 2.5785769761956087E-4 0.0 0.0 1.929652294366222 0.0 22 2.5785769761956087E-4 0.0 0.0 2.0294947948845157 0.0 23 2.5785769761956087E-4 0.0 0.0 2.1419723225861684 0.0 24 2.5785769761956087E-4 0.0 0.0 2.2288187951444365 0.0 25 2.5785769761956087E-4 0.0 0.0 2.307723250616022 0.0 26 2.5785769761956087E-4 0.0 0.0 2.3854415606785575 0.0 27 2.5785769761956087E-4 0.0 0.0 2.4685233108515803 0.0 28 2.5785769761956087E-4 0.0 0.0 2.550883059471268 0.0 29 2.5785769761956087E-4 0.0 0.0 2.645980978353362 0.0 30 2.5785769761956087E-4 0.0 0.0 2.759954080701208 0.0 31 2.5785769761956087E-4 0.0 0.0 2.8595902950614063 0.0 32 2.5785769761956087E-4 0.0 0.0 2.963145946425422 0.0 33 2.5785769761956087E-4 0.0 0.0 3.06304001848324 0.0 34 2.5785769761956087E-4 0.0 0.0 3.1705666783905966 0.0 35 2.5785769761956087E-4 0.0 0.0 3.28252849069701 0.0 36 2.5785769761956087E-4 0.0 0.0 3.387579716707219 0.0 37 2.5785769761956087E-4 0.0 0.0 3.500469816725063 0.0 38 2.5785769761956087E-4 0.0 0.0 3.629450237074367 0.0 39 2.5785769761956087E-4 0.0 0.0 3.7964904535923187 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAA 25 3.8918002E-5 45.000004 31 ATATCGT 35 1.212502E-7 45.0 31 CGTTTTT 8235 0.0 41.25683 1 TACGGGA 465 0.0 40.161293 4 GGGCGAT 3665 0.0 39.29059 7 AATAGCG 155 0.0 39.19355 1 CATACGA 345 0.0 39.130432 18 GCGATAT 145 0.0 38.793102 9 CGTTAGG 275 0.0 38.454544 2 CGTAAGG 340 0.0 38.38235 2 AGGGCGA 2000 0.0 38.3625 6 TCGTTGA 285 0.0 37.894737 24 TCACGAC 185 0.0 37.7027 25 AAGGGAT 2760 0.0 37.58152 5 TATCCGA 30 1.140211E-4 37.500004 23 TAAGGGA 2155 0.0 37.37819 4 TAACGGG 440 0.0 37.329544 3 TAGCGGG 915 0.0 36.885246 3 GGCGATA 665 0.0 36.8797 8 AGGGATT 2370 0.0 36.740505 6 >>END_MODULE