SRR1547314_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547314_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2122465
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19900	0.9375890768516795	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2793	0.1315922759621478	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGTCG	35	1.2125747E-7	45.000004	41
CGACTCG	35	1.2125747E-7	45.000004	29
CGCGATA	20	7.034638E-4	45.0	11
TAAGTCG	20	7.034638E-4	45.0	19
CGTTCGA	20	7.034638E-4	45.0	14
ACCTACG	20	7.034638E-4	45.0	34
CTACGGT	25	3.8919257E-5	45.0	33
GTGTCGA	20	7.034638E-4	45.0	29
CCGCGTA	25	3.8919257E-5	45.0	19
CGCGTGT	20	7.034638E-4	45.0	21
CGGTACG	20	7.034638E-4	45.0	23
GTGCGTA	25	3.8919257E-5	45.0	23
CTTACGT	20	7.034638E-4	45.0	35
AGTACGG	255	0.0	44.11765	2
CGTTTTT	10410	0.0	42.406338	1
CGAACGG	75	0.0	42.000004	2
TAACGCG	120	0.0	41.250004	1
GTATGCG	165	0.0	40.90909	1
CGTAAGG	535	0.0	40.79439	2
GCGTAAG	260	0.0	40.673077	1