SRR1547312_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547312_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1865031
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45718	2.4513265463147795	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2853	0.15297332859346574	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2265	0.12144570251111109	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1920	0.1029473504729948	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAACG	20	7.034417E-4	45.000004	1
CGACGCC	20	7.034417E-4	45.000004	27
ACGTTAT	20	7.034417E-4	45.000004	11
CGTGCGC	20	7.034417E-4	45.000004	12
CGCGACT	20	7.034417E-4	45.000004	39
CCGTAGA	20	7.034417E-4	45.000004	28
CTCGCGA	20	7.034417E-4	45.000004	37
ACGTCCG	20	7.034417E-4	45.000004	25
CGTAAAT	20	7.034417E-4	45.000004	32
CCGCGTG	20	7.034417E-4	45.000004	1
ACCGTAC	20	7.034417E-4	45.000004	30
CACGTCG	20	7.034417E-4	45.000004	25
CACGTAC	40	6.8193913E-9	45.000004	28
ATACCCG	20	7.034417E-4	45.000004	13
TCGCGAC	20	7.034417E-4	45.000004	38
TACCGCG	20	7.034417E-4	45.000004	1
CGTGCTA	25	3.8917442E-5	45.0	20
CCTAGCG	25	3.8917442E-5	45.0	43
TAGCGCA	25	3.8917442E-5	45.0	45
TAGCGAT	35	1.2124656E-7	45.0	17