##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547312_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1865031 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301252365242185 31.0 31.0 33.0 30.0 34.0 2 31.68332108152626 31.0 31.0 34.0 30.0 34.0 3 31.67272125771636 31.0 31.0 34.0 30.0 34.0 4 35.48409007678693 37.0 35.0 37.0 33.0 37.0 5 35.41306015824938 37.0 35.0 37.0 33.0 37.0 6 35.45989798560989 37.0 35.0 37.0 33.0 37.0 7 35.91933699761559 37.0 35.0 37.0 35.0 37.0 8 35.93721927410322 37.0 35.0 37.0 35.0 37.0 9 37.69900178602929 39.0 37.0 39.0 35.0 39.0 10 36.96268373019001 39.0 37.0 39.0 32.0 39.0 11 36.68703737364151 39.0 35.0 39.0 32.0 39.0 12 36.12079799209772 38.0 35.0 39.0 32.0 39.0 13 35.74995750740872 38.0 35.0 39.0 30.0 39.0 14 36.85194455212809 39.0 35.0 41.0 31.0 41.0 15 37.09951845304448 39.0 35.0 41.0 32.0 41.0 16 37.25998924414661 39.0 35.0 41.0 32.0 41.0 17 37.19651523218649 39.0 35.0 41.0 32.0 41.0 18 37.02884080747183 38.0 35.0 40.0 32.0 41.0 19 36.87939288944795 38.0 35.0 40.0 32.0 41.0 20 36.632244182536375 38.0 35.0 40.0 32.0 41.0 21 36.46810696444188 38.0 35.0 40.0 31.0 41.0 22 36.3578975362876 38.0 35.0 40.0 31.0 41.0 23 36.297982714496435 38.0 35.0 40.0 31.0 41.0 24 36.1501090330402 37.0 35.0 40.0 31.0 41.0 25 36.04107867375931 37.0 35.0 40.0 31.0 41.0 26 35.81927539006054 37.0 35.0 40.0 30.0 41.0 27 35.73295778997775 37.0 34.0 40.0 30.0 41.0 28 35.72919538602844 37.0 34.0 40.0 30.0 41.0 29 35.71508999046129 37.0 35.0 40.0 30.0 41.0 30 35.63597334307044 36.0 35.0 40.0 30.0 41.0 31 35.46417834341628 36.0 34.0 40.0 29.0 41.0 32 35.161063274551466 36.0 34.0 40.0 27.0 41.0 33 34.88078750433639 36.0 34.0 40.0 26.0 41.0 34 34.62077466808863 36.0 34.0 40.0 24.0 41.0 35 34.41879840067001 36.0 33.0 40.0 23.0 41.0 36 34.09959727210968 36.0 33.0 40.0 22.0 41.0 37 34.021583555447606 36.0 33.0 40.0 22.0 41.0 38 33.95708543182392 35.0 33.0 40.0 22.0 41.0 39 33.85151935812327 36.0 33.0 40.0 21.0 41.0 40 33.74613022518125 35.0 33.0 40.0 21.0 41.0 41 33.738978065243955 35.0 33.0 40.0 21.0 41.0 42 33.64067567777694 35.0 33.0 40.0 21.0 41.0 43 33.518648751682946 35.0 33.0 40.0 20.0 41.0 44 33.41221513208092 35.0 33.0 40.0 19.0 41.0 45 33.26793924605006 35.0 33.0 40.0 20.0 41.0 46 33.19023651617587 35.0 33.0 40.0 20.0 41.0 47 33.15865205457711 35.0 33.0 40.0 19.0 41.0 48 33.05527736536283 35.0 32.0 40.0 18.0 41.0 49 32.95585971493235 35.0 32.0 39.0 18.0 41.0 50 32.812383815604136 35.0 32.0 39.0 18.0 41.0 51 32.37485918464626 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 3.0 14 25.0 15 66.0 16 213.0 17 514.0 18 1142.0 19 2140.0 20 3887.0 21 6380.0 22 9862.0 23 14704.0 24 21513.0 25 30335.0 26 40053.0 27 44693.0 28 45129.0 29 47450.0 30 54113.0 31 64117.0 32 78087.0 33 99610.0 34 160091.0 35 241519.0 36 165718.0 37 163115.0 38 218370.0 39 352045.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.242339135381663 23.723519877149496 28.107843783829868 17.926297203638974 2 33.523893168531785 25.76273531110207 28.061571094528727 12.651800425837425 3 26.738483167303922 24.52232697472589 36.26127394129106 12.477915916679134 4 22.577372708550154 27.649084653284582 35.61136517301857 14.16217746514669 5 20.511026358275007 31.317281053237185 35.02606659085023 13.145625997637572 6 19.281770651533407 38.988413597414734 32.22091214569624 9.508903605355622 7 84.04396495286137 3.5364559623941907 11.136865821533261 1.2827132632111744 8 84.56299117816273 2.8799521294820303 10.614408017882813 1.9426486744724352 9 80.58525568743897 4.974126435431905 12.118189992552402 2.3224278845767174 10 40.167267997153935 28.23550922209872 18.785478632794845 12.811744147952501 11 33.73488161858972 26.88314564208316 26.66604469309089 12.71592804623623 12 32.95232089975984 24.800981860355137 27.825006662087652 14.421690577797367 13 18.97812958604978 38.258667014113975 28.30542763096163 14.45777576887462 14 15.132617098589781 39.61135230459976 28.88842062142667 16.367609975383786 15 13.500258172652357 29.572001752249694 42.07989036107175 14.847849714026202 16 14.591231995607579 26.6260453579592 42.50122384024716 16.28149880618606 17 15.218352938905575 26.9442170130148 30.098427318366287 27.73900272971334 18 17.71691730593218 29.600044181571246 34.736419930821526 17.94661858167505 19 22.652063156054776 31.459852409959943 27.67616195119545 18.21192248278983 20 25.363170907078757 28.876570952439934 28.430465767056955 17.329792373424354 21 19.110298970901823 34.051176629235655 29.68921160023614 17.149312799626387 22 20.34909875492686 30.153171716716777 27.546244539634994 21.95148498872137 23 17.155907864266062 34.617011727955195 28.010419129762454 20.21666127801629 24 16.4009606274641 29.924381953972883 38.34568969631068 15.328967722252337 25 15.133099664295123 31.878880297432055 34.50478839225728 18.483231646015536 26 15.49974236353176 37.44039643308878 29.03619296408478 18.023668239294683 27 15.348699297759664 37.96076311868274 29.320585019766426 17.369952563791166 28 14.29000375865066 33.55783362314085 36.02578187708408 16.12638074112441 29 13.8647025170091 30.038321078845335 35.77136251354535 20.32561389060021 30 15.638131484141551 36.31387360317335 31.78772899753409 16.26026591515101 31 22.708308869932996 33.16261231046562 26.855961107348886 17.273117712252503 32 22.95983283923967 32.611843985435094 27.905380661232975 16.52294251409226 33 21.537711705596315 34.05434011552623 26.30996482096008 18.097983357917375 34 16.432595490369863 32.994733063418245 28.389501300514574 22.18317014569731 35 16.61141289340499 32.7560775129207 30.133869088503083 20.498640505171227 36 23.699498828705796 32.38664665627542 26.29371844221356 17.620136072805224 37 16.813929634413583 37.15348431205701 28.686869011828758 17.34571704170065 38 17.236013771352862 36.28207788503248 27.479918564356304 19.00198977925836 39 16.680312552445507 36.80378503091906 27.973047096804287 18.542855319831144 40 21.400073242750388 32.69725811528066 26.636983513946955 19.265685128022 41 15.825956780343061 30.453971006380055 29.219246221644575 24.50082599163231 42 18.60778721640552 31.296852438377698 27.044697916549374 23.050662428667408 43 18.982794387868086 32.72937554389176 26.877354853619057 21.410475214621098 44 17.310543363622376 35.07314355632695 27.940125392017613 19.676187688033068 45 15.942255115330523 38.93913827705813 24.467475339551996 20.65113126805935 46 18.853734870894908 37.16313562616386 26.238384241334327 17.744745261606912 47 18.34559318316961 32.96218668751351 28.139746738794152 20.55247339052273 48 19.086653251340056 30.68259991388883 30.652895313804436 19.577851520966675 49 18.016054424832618 31.043505443073066 30.5002973140929 20.440142818001416 50 17.08813419187134 34.786392290530294 29.140641630085508 18.98483188751286 51 15.7085324587098 35.77441876301252 27.048129494898475 21.468919283379204 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2987.0 1 3184.0 2 3381.0 3 28978.0 4 54575.0 5 34078.5 6 13582.0 7 15204.5 8 16827.0 9 21061.5 10 25296.0 11 28953.0 12 32610.0 13 33019.5 14 33429.0 15 30930.0 16 28431.0 17 25905.5 18 23380.0 19 21363.0 20 19346.0 21 17898.0 22 16450.0 23 16014.0 24 15578.0 25 16117.0 26 18698.0 27 20740.0 28 24427.0 29 28114.0 30 33533.5 31 38953.0 32 42338.5 33 45724.0 34 54409.0 35 63094.0 36 63111.0 37 63128.0 38 72327.0 39 81526.0 40 99838.5 41 118151.0 42 141287.5 43 164424.0 44 173124.0 45 181824.0 46 173244.5 47 164665.0 48 157607.0 49 150549.0 50 133480.5 51 116412.0 52 103098.0 53 89784.0 54 81124.5 55 72465.0 56 61133.5 57 49802.0 58 43734.5 59 37667.0 60 32219.0 61 26771.0 62 22632.5 63 18494.0 64 15680.0 65 12866.0 66 9625.0 67 6384.0 68 5087.5 69 3791.0 70 3205.0 71 2619.0 72 2324.5 73 2030.0 74 1507.5 75 819.0 76 653.0 77 571.0 78 489.0 79 320.5 80 152.0 81 134.0 82 116.0 83 90.0 84 64.0 85 45.0 86 26.0 87 20.0 88 14.0 89 11.5 90 9.0 91 9.0 92 9.0 93 7.5 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1865031.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.475694762757456 #Duplication Level Percentage of deduplicated Percentage of total 1 79.78704354039792 19.52843323717618 2 7.682121860774941 3.760505395892675 3 2.948275876987804 2.164833013246636 4 1.610045675929226 1.5762794607256496 5 1.1220566836217332 1.3731558447418726 6 0.8219302188728659 1.2070387892051215 7 0.6040624920111973 1.0349394420467677 8 0.47248165578273355 0.9251453430352337 9 0.36580097788454274 0.8057909770758234 >10 2.877610902942387 14.987168109707591 >50 0.8054735256368535 14.364484980192996 >100 0.8960256103082532 34.35209288861336 >500 0.0055242022262349776 0.8598190855313835 >1k 0.0013258085342963946 0.5877251228122748 >5k 0.0 0.0 >10k+ 2.209680890493991E-4 2.4725883099964645 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45718 2.4513265463147795 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2853 0.15297332859346574 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2265 0.12144570251111109 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1920 0.1029473504729948 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.36184117046848E-5 0.0 0.0 0.08932827390000488 0.0 2 5.36184117046848E-5 0.0 0.0 0.3042308680123816 0.0 3 5.36184117046848E-5 0.0 0.0 0.42996604345986744 0.0 4 5.36184117046848E-5 0.0 0.0 0.6676028441350305 0.0 5 5.36184117046848E-5 0.0 0.0 1.122394212214167 0.0 6 5.36184117046848E-5 0.0 0.0 1.7687105469024376 0.0 7 5.36184117046848E-5 0.0 0.0 2.180607185617826 0.0 8 5.36184117046848E-5 0.0 0.0 2.9207021223775906 0.0 9 5.36184117046848E-5 0.0 0.0 3.2452007500143427 0.0 10 5.36184117046848E-5 0.0 0.0 3.71259244484408 0.0 11 5.36184117046848E-5 0.0 0.0 4.286309450084207 0.0 12 5.36184117046848E-5 0.0 0.0 4.682442275758419 0.0 13 5.36184117046848E-5 0.0 0.0 4.866675138375716 0.0 14 5.36184117046848E-5 0.0 0.0 4.946137624522059 0.0 15 5.36184117046848E-5 0.0 0.0 5.046833001703457 0.0 16 5.36184117046848E-5 0.0 0.0 5.261306648522196 0.0 17 5.36184117046848E-5 0.0 0.0 5.51931844564514 0.0 18 5.36184117046848E-5 0.0 0.0 5.838884179405061 0.0 19 5.36184117046848E-5 0.0 0.0 6.0017769141638935 0.0 20 5.36184117046848E-5 0.0 0.0 6.167296951096255 0.0 21 5.36184117046848E-5 0.0 0.0 6.4126011846451885 0.0 22 5.36184117046848E-5 0.0 0.0 6.650345222143761 0.0 23 5.36184117046848E-5 0.0 0.0 6.932485304533812 0.0 24 5.36184117046848E-5 0.0 0.0 7.1465300040589135 0.0 25 5.36184117046848E-5 0.0 0.0 7.329797735265527 0.0 26 5.36184117046848E-5 0.0 0.0 7.503843099658933 0.0 27 5.36184117046848E-5 0.0 0.0 7.665234518890035 0.0 28 5.36184117046848E-5 0.0 0.0 7.835526594464113 0.0 29 5.36184117046848E-5 0.0 0.0 8.021260772609141 0.0 30 5.36184117046848E-5 0.0 0.0 8.25803967869703 0.0 31 5.36184117046848E-5 0.0 0.0 8.461682406351423 0.0 32 5.36184117046848E-5 0.0 0.0 8.650365597140208 0.0 33 5.36184117046848E-5 0.0 0.0 8.835188262286257 0.0 34 5.36184117046848E-5 0.0 0.0 9.034434280180866 0.0 35 5.36184117046848E-5 0.0 0.0 9.280489171493665 0.0 36 5.36184117046848E-5 0.0 0.0 9.480807557622366 0.0 37 5.36184117046848E-5 0.0 0.0 9.69442330985383 0.0 38 5.36184117046848E-5 0.0 0.0 9.896618340392198 0.0 39 5.36184117046848E-5 0.0 0.0 10.098438042048631 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.034417E-4 45.000004 1 CGACGCC 20 7.034417E-4 45.000004 27 ACGTTAT 20 7.034417E-4 45.000004 11 CGTGCGC 20 7.034417E-4 45.000004 12 CGCGACT 20 7.034417E-4 45.000004 39 CCGTAGA 20 7.034417E-4 45.000004 28 CTCGCGA 20 7.034417E-4 45.000004 37 ACGTCCG 20 7.034417E-4 45.000004 25 CGTAAAT 20 7.034417E-4 45.000004 32 CCGCGTG 20 7.034417E-4 45.000004 1 ACCGTAC 20 7.034417E-4 45.000004 30 CACGTCG 20 7.034417E-4 45.000004 25 CACGTAC 40 6.8193913E-9 45.000004 28 ATACCCG 20 7.034417E-4 45.000004 13 TCGCGAC 20 7.034417E-4 45.000004 38 TACCGCG 20 7.034417E-4 45.000004 1 CGTGCTA 25 3.8917442E-5 45.0 20 CCTAGCG 25 3.8917442E-5 45.0 43 TAGCGCA 25 3.8917442E-5 45.0 45 TAGCGAT 35 1.2124656E-7 45.0 17 >>END_MODULE