##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547311_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 706556 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.267811751651674 31.0 31.0 33.0 30.0 34.0 2 31.67273931577964 31.0 31.0 34.0 30.0 34.0 3 31.780102355651923 31.0 31.0 34.0 30.0 34.0 4 35.574359286454296 37.0 35.0 37.0 33.0 37.0 5 35.45786887380476 37.0 35.0 37.0 33.0 37.0 6 35.486169532209765 37.0 35.0 37.0 33.0 37.0 7 35.86959561591721 37.0 35.0 37.0 35.0 37.0 8 35.86201801414184 37.0 35.0 37.0 35.0 37.0 9 37.60305764865064 39.0 37.0 39.0 35.0 39.0 10 36.89246429157774 39.0 37.0 39.0 32.0 39.0 11 36.62304474096887 39.0 35.0 39.0 32.0 39.0 12 36.173973471317204 38.0 35.0 39.0 32.0 39.0 13 35.958517088525184 38.0 35.0 39.0 31.0 39.0 14 36.979809102180155 39.0 35.0 41.0 31.0 41.0 15 37.15715527148591 39.0 35.0 41.0 32.0 41.0 16 37.26831985008973 39.0 35.0 41.0 32.0 41.0 17 37.17703196915743 39.0 35.0 41.0 32.0 41.0 18 37.08645174621686 39.0 35.0 41.0 32.0 41.0 19 37.033047628213474 39.0 35.0 41.0 31.0 41.0 20 36.89919553439501 39.0 35.0 41.0 31.0 41.0 21 36.764683903328255 38.0 35.0 41.0 31.0 41.0 22 36.63828486347862 38.0 35.0 40.0 31.0 41.0 23 36.557334450489414 38.0 35.0 40.0 31.0 41.0 24 36.44173993285741 38.0 35.0 40.0 30.0 41.0 25 36.32111396690425 38.0 35.0 40.0 30.0 41.0 26 36.10538159749546 38.0 35.0 40.0 30.0 41.0 27 36.090314143535686 38.0 35.0 40.0 30.0 41.0 28 36.14701311714853 38.0 35.0 40.0 30.0 41.0 29 36.13743284325658 38.0 35.0 40.0 30.0 41.0 30 36.11767644744366 38.0 35.0 40.0 30.0 41.0 31 36.039202837425485 38.0 35.0 40.0 30.0 41.0 32 35.90291640011549 38.0 35.0 40.0 29.0 41.0 33 35.76989368146332 38.0 34.0 40.0 29.0 41.0 34 35.60970680314087 38.0 34.0 40.0 28.0 41.0 35 35.494606230787085 38.0 34.0 40.0 27.0 41.0 36 35.26851799432741 38.0 34.0 40.0 26.0 41.0 37 35.23569823198727 38.0 34.0 40.0 26.0 41.0 38 35.15434586925877 38.0 34.0 40.0 26.0 41.0 39 35.03709260129416 38.0 34.0 40.0 26.0 41.0 40 34.9068481479175 37.0 34.0 40.0 25.0 41.0 41 34.87372267732494 37.0 34.0 40.0 25.0 41.0 42 34.76281993217806 37.0 33.0 40.0 25.0 41.0 43 34.66765125481915 37.0 33.0 40.0 24.0 41.0 44 34.559706520077675 37.0 33.0 40.0 24.0 41.0 45 34.40430482509525 37.0 33.0 40.0 24.0 41.0 46 34.319401434564284 36.0 33.0 40.0 23.0 41.0 47 34.280157552975275 36.0 33.0 40.0 23.0 41.0 48 34.16223767118247 36.0 33.0 40.0 23.0 41.0 49 34.022667700790876 36.0 33.0 40.0 24.0 41.0 50 33.88914396028057 36.0 33.0 40.0 23.0 41.0 51 33.39331914243174 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 3.0 14 6.0 15 32.0 16 71.0 17 174.0 18 396.0 19 676.0 20 1226.0 21 1895.0 22 2863.0 23 4002.0 24 5664.0 25 7962.0 26 10433.0 27 12440.0 28 14386.0 29 16732.0 30 19979.0 31 23849.0 32 29576.0 33 37299.0 34 56907.0 35 74012.0 36 60087.0 37 73359.0 38 102492.0 39 149990.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.94309863620152 23.118903526401304 28.81427657538822 14.123721262008957 2 31.29957144232021 25.70539348614972 29.32152582385543 13.673509247674637 3 28.729499147979777 26.04945680172555 31.394539144809468 13.826504905485198 4 25.316606185496976 29.034641274010838 30.757080825865184 14.891671714627009 5 22.848012047169654 33.2006238712855 29.764944321469212 14.186419760075633 6 22.29660494001891 41.65006029246089 26.203018585929495 9.850316181590701 7 89.84850457713189 3.0215580930598565 5.821477703111997 1.3084596266962563 8 90.104393706939 2.6358844875706953 5.664377628949439 1.5953441765408545 9 84.75563154229813 5.3147945810381625 7.311380838886089 2.618193037777614 10 40.46713919349634 32.107150742474765 14.46594466680631 12.959765397222583 11 34.462944196921406 25.034533709996094 23.81792809062551 16.684594002456986 12 32.46027208034466 22.345008746652777 26.909968919661004 18.28475025334156 13 24.64871857290859 28.74025554945397 27.841529899965465 18.769495977671973 14 20.96918007914447 30.52482747298162 28.795877467603415 19.710114980270497 15 19.768425998788487 25.297924014515484 36.05913756305233 18.8745124236437 16 22.979636433630173 23.83703485640204 34.11109664343661 19.072232066531175 17 22.873204671674998 24.37980853605376 27.843935937137328 24.90305085513392 18 24.16227446939804 24.500959584236774 30.486472409830217 20.850293536534966 19 26.183628756956278 26.051296712504033 26.12376089085649 21.641313639683197 20 27.83020737209789 26.521606213803295 26.05172130729907 19.596465106799744 21 25.948827835302506 26.941530466091862 27.864316487298957 19.245325211306678 22 25.45148579871942 24.82393469165926 27.44609061419052 22.278488895430794 23 23.595298886429383 28.052411981498988 26.843307536840676 21.50898159523095 24 22.68411845628655 25.55961593985473 31.49714955360934 20.25911605024938 25 22.616324820679466 27.005927343338676 29.124513838959686 21.253233997022175 26 21.496243751379936 29.354219623073046 26.616432384694207 22.533104240852815 27 21.25917832415265 29.499147979777966 28.111006063213672 21.13066763285571 28 20.753061328472196 28.0759062268242 30.536999190439257 20.63403325426435 29 21.349475483896533 26.545100459128506 30.417829584633065 21.687594472341896 30 22.469698084794413 27.95333986265774 29.10569013637985 20.471271916168003 31 25.8419714785523 26.958089663098185 26.584021648673286 20.615917209676233 32 26.692010258210246 26.998426168626406 26.284682318174358 20.024881254988987 33 25.237490022022318 27.105848651769993 26.446452935082288 21.210208391125402 34 22.26744943075991 27.224593662781153 28.385860427198978 22.12209647925996 35 22.07822168377312 27.735098138010294 28.454220189199443 21.732459989017148 36 25.777574601305485 27.428257632799095 26.177118303432422 20.617049462462987 37 22.871930887289896 29.377996931594947 27.386081216492393 20.36399096462276 38 22.687232151450132 29.18508936305119 26.55132784945567 21.576350636043003 39 22.34967928939815 28.806633869077608 26.908129008882526 21.935557832641717 40 24.545117442920304 26.75414262988355 26.783581202339235 21.91715872485691 41 21.244317506326464 26.070261946682216 28.44572829329876 24.23969225369256 42 22.77724624799733 26.958938852688252 26.421684905371972 23.84212999394245 43 22.27070465752184 27.369380487887724 26.94761632482068 23.412298529769757 44 21.482515186340503 28.309574895691213 27.954755178641182 22.2531547393271 45 21.15019899342727 29.68370518401938 25.98477686128205 23.181318961271295 46 21.936407022231784 29.794524425523246 26.662005559361184 21.60706299288379 47 21.699483126602846 28.1142612899756 28.18615934193468 22.000096241486876 48 22.197674352776 26.678564756367507 29.249061645502977 21.87469924535352 49 22.35534055333194 26.40455958197227 29.029829199667116 22.210270665028673 50 21.38216928311415 28.580466374922864 28.68024615175584 21.357118190207146 51 20.93167420558314 28.84555505862239 27.012154733665838 23.210616002128635 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 556.0 1 850.0 2 1144.0 3 4403.0 4 7662.0 5 5122.0 6 2582.0 7 2761.0 8 2940.0 9 3284.5 10 3629.0 11 3829.0 12 4029.0 13 4041.5 14 4054.0 15 3881.0 16 3708.0 17 3373.0 18 3038.0 19 3035.0 20 3032.0 21 3076.5 22 3121.0 23 3315.5 24 3510.0 25 3945.0 26 5074.5 27 5769.0 28 6949.5 29 8130.0 30 9828.0 31 11526.0 32 13055.0 33 14584.0 34 17340.5 35 20097.0 36 22295.5 37 24494.0 38 26576.0 39 28658.0 40 33554.0 41 38450.0 42 40892.0 43 43334.0 44 46382.0 45 49430.0 46 50853.5 47 52277.0 48 52458.5 49 52640.0 50 52165.5 51 51691.0 52 48929.0 53 46167.0 54 43842.0 55 41517.0 56 39483.0 57 37449.0 58 35004.5 59 32560.0 60 29693.5 61 26827.0 62 24264.0 63 21701.0 64 18907.5 65 16114.0 66 14217.0 67 12320.0 68 10463.0 69 8606.0 70 7160.0 71 5714.0 72 4723.5 73 3733.0 74 3021.0 75 1883.5 76 1458.0 77 1186.0 78 914.0 79 672.0 80 430.0 81 291.5 82 153.0 83 106.0 84 59.0 85 40.0 86 21.0 87 19.0 88 17.0 89 14.0 90 11.0 91 9.5 92 8.0 93 5.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 706556.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.48644587331537 #Duplication Level Percentage of deduplicated Percentage of total 1 74.77032583912484 19.804001882681334 2 5.792311143455227 3.068354711650566 3 2.609127352767845 2.073195312170164 4 1.6940800152160045 1.794806345123359 5 1.253587562243003 1.660153955740533 6 1.0486619176212937 1.6665196272290097 7 0.8593221535490131 1.5932272795401714 8 0.7901941724432161 1.674354814226118 9 0.6705111553716483 1.598351168178478 >10 10.243647814492784 59.544331959947115 >50 0.25049215861978086 3.9655541398731566 >100 0.017201178274316112 0.8244901455498962 >500 0.0 0.0 >1k 0.0 0.0 >5k 5.375368210723785E-4 0.7326586580900994 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5146 0.7283216050815505 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038213531553054535 0.0 2 0.0 0.0 0.0 0.12313249055984239 0.0 3 0.0 0.0 0.0 0.17337620797219186 0.0 4 0.0 0.0 0.0 0.29155509258997164 0.0 5 0.0 0.0 0.0 0.4990404157632233 0.0 6 0.0 0.0 0.0 0.8266860659310797 0.0 7 0.0 0.0 0.0 0.9934102887810733 0.0 8 0.0 0.0 0.0 1.3519098273880628 0.0 9 0.0 0.0 0.0 1.4992442212648396 0.0 10 0.0 0.0 0.0 1.738857217262326 0.0 11 0.0 0.0 0.0 1.9696952541624444 0.0 12 0.0 0.0 0.0 2.1698209342217742 0.0 13 0.0 0.0 0.0 2.274412785398468 0.0 14 0.0 0.0 0.0 2.325788755597575 0.0 15 0.0 0.0 0.0 2.3835336477221905 0.0 16 0.0 0.0 0.0 2.490248472874054 0.0 17 0.0 0.0 0.0 2.6020584355663243 0.0 18 0.0 0.0 0.0 2.7425993127225583 0.0 19 0.0 0.0 0.0 2.8371424204167823 0.0 20 0.0 0.0 0.0 2.935082286471278 0.0 21 0.0 0.0 0.0 3.0593470298178773 0.0 22 0.0 0.0 0.0 3.1877161895164714 0.0 23 0.0 0.0 0.0 3.3271248138859484 0.0 24 0.0 0.0 0.0 3.44445450891366 0.0 25 1.4153159834464642E-4 0.0 0.0 3.5525846500489697 0.0 26 1.4153159834464642E-4 0.0 0.0 3.6584502856107655 0.0 27 1.4153159834464642E-4 0.0 0.0 3.7607776312139447 0.0 28 1.4153159834464642E-4 0.0 0.0 3.867492456365808 0.0 29 1.4153159834464642E-4 0.0 0.0 3.9931725156958544 0.0 30 1.4153159834464642E-4 0.0 0.0 4.154093943013717 0.0 31 1.4153159834464642E-4 0.0 0.0 4.282746165909001 0.0 32 1.4153159834464642E-4 0.0 0.0 4.422154790278477 0.0 33 1.4153159834464642E-4 0.0 0.0 4.55561908751748 0.0 34 1.4153159834464642E-4 0.0 0.0 4.685120500002831 0.0 35 1.4153159834464642E-4 0.0 0.0 4.838257689411738 0.0 36 1.4153159834464642E-4 0.0 0.0 4.969032886282191 0.0 37 1.4153159834464642E-4 0.0 0.0 5.104761689094707 0.0 38 1.4153159834464642E-4 0.0 0.0 5.2693629379695315 0.0 39 1.4153159834464642E-4 0.0 0.0 5.507702149581916 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGACG 20 7.03144E-4 45.0 1 TTAACGG 40 6.8084773E-9 45.0 2 TAGGCGT 20 7.03144E-4 45.0 14 CGGGTAC 30 2.16431E-6 44.999996 6 CGGTCTA 120 0.0 44.999996 31 CACGACC 140 0.0 43.39286 27 TACGGGA 255 0.0 41.47059 4 TATTGCG 50 1.0804797E-9 40.499996 1 CGTTTTT 2540 0.0 40.482285 1 ACAACGA 95 0.0 40.263157 13 TAGGGCG 275 0.0 40.090908 5 GCGATAT 45 1.9264917E-8 40.0 9 AGGGCGA 685 0.0 39.416058 6 GGGCGAT 1305 0.0 39.137928 7 TTAGGGA 910 0.0 39.065937 4 CTAGGGA 425 0.0 38.64706 4 ACACGTC 35 6.2448707E-6 38.57143 41 TAATGCG 35 6.2448707E-6 38.57143 1 TAGGGAC 620 0.0 38.467743 5 TAACGGG 165 0.0 38.181816 3 >>END_MODULE