##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547310_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2140478 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.352378300547823 31.0 31.0 33.0 30.0 34.0 2 31.740259885875957 31.0 31.0 34.0 30.0 34.0 3 31.66977562955564 31.0 31.0 34.0 30.0 34.0 4 35.52574938868795 37.0 35.0 37.0 33.0 37.0 5 35.47169417298379 37.0 35.0 37.0 33.0 37.0 6 35.5264665182263 37.0 35.0 37.0 33.0 37.0 7 35.95112353408911 37.0 35.0 37.0 35.0 37.0 8 35.956305554179956 37.0 35.0 37.0 35.0 37.0 9 37.71605314326987 39.0 37.0 39.0 35.0 39.0 10 37.06166192784976 39.0 37.0 39.0 33.0 39.0 11 36.734638711540136 39.0 37.0 39.0 32.0 39.0 12 36.57881323704331 39.0 35.0 39.0 32.0 39.0 13 36.48430163729784 39.0 35.0 39.0 32.0 39.0 14 37.64489427127959 40.0 36.0 41.0 32.0 41.0 15 37.735403026800554 40.0 36.0 41.0 32.0 41.0 16 37.796930872449984 40.0 36.0 41.0 33.0 41.0 17 37.690662552943785 40.0 36.0 41.0 32.0 41.0 18 37.45437093957518 39.0 36.0 41.0 32.0 41.0 19 37.28228694712116 39.0 36.0 41.0 32.0 41.0 20 37.026249277030644 38.0 35.0 41.0 32.0 41.0 21 36.926778971799756 38.0 35.0 41.0 32.0 41.0 22 36.82852475007919 38.0 35.0 40.0 31.0 41.0 23 36.73571650818182 38.0 35.0 40.0 31.0 41.0 24 36.60535123463077 38.0 35.0 40.0 31.0 41.0 25 36.528501577684985 38.0 35.0 40.0 31.0 41.0 26 36.32607763312681 38.0 35.0 40.0 31.0 41.0 27 36.28661308361964 38.0 35.0 40.0 30.0 41.0 28 36.247974050655976 38.0 35.0 40.0 30.0 41.0 29 36.230653153174195 38.0 35.0 40.0 30.0 41.0 30 36.16164800572582 38.0 35.0 40.0 30.0 41.0 31 36.00917972527632 38.0 35.0 40.0 30.0 41.0 32 35.69248644461658 38.0 35.0 40.0 28.0 41.0 33 35.321127336978 38.0 34.0 40.0 25.0 41.0 34 34.905310402629695 38.0 34.0 40.0 23.0 41.0 35 34.596991886858916 38.0 34.0 40.0 22.0 41.0 36 34.32379823572118 38.0 33.0 40.0 20.0 41.0 37 34.25717713520064 38.0 33.0 40.0 20.0 41.0 38 34.16511592270511 38.0 33.0 40.0 19.0 41.0 39 34.02400071385924 38.0 33.0 40.0 18.0 41.0 40 33.918407010022996 38.0 33.0 40.0 18.0 41.0 41 33.87216033054299 38.0 33.0 40.0 18.0 41.0 42 33.78629539757007 37.0 33.0 40.0 18.0 41.0 43 33.681048345276146 37.0 33.0 40.0 17.0 41.0 44 33.5912982987912 37.0 33.0 40.0 17.0 41.0 45 33.460468642985354 37.0 33.0 40.0 17.0 41.0 46 33.368380333738536 37.0 33.0 40.0 17.0 41.0 47 33.32231445499556 37.0 33.0 40.0 17.0 41.0 48 33.19150815845806 36.0 32.0 40.0 15.0 41.0 49 33.065456874585955 36.0 32.0 40.0 15.0 41.0 50 32.951122132533015 36.0 32.0 40.0 15.0 41.0 51 32.53136402242863 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 0.0 13 6.0 14 20.0 15 72.0 16 183.0 17 484.0 18 1168.0 19 2362.0 20 4174.0 21 6629.0 22 10422.0 23 15784.0 24 23955.0 25 35940.0 26 51060.0 27 56695.0 28 54492.0 29 53813.0 30 57387.0 31 66330.0 32 79701.0 33 99633.0 34 142688.0 35 192672.0 36 183771.0 37 212267.0 38 302534.0 39 486096.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.917429658235218 23.493023520914488 25.71285479224734 20.876692028602957 2 36.39743085422975 24.642860146191644 27.24410155114886 11.715607448429743 3 25.07696878921437 24.93335600739648 37.786653261561206 12.203021941827947 4 21.9089380970045 26.091742124889862 38.56717985421948 13.43213992388616 5 20.93952846046537 29.935229420718173 36.29292148763033 12.832320631186118 6 19.93138915700138 38.118027842379135 32.903444931459234 9.047138069160253 7 82.502973634861 2.3780202366013574 14.01537413605746 1.1036319924801843 8 82.82430373028828 2.454591918253773 13.317866383116295 1.403237968341651 9 78.07260808099873 4.756834688326626 14.553711834459406 2.616845396215238 10 34.97279579607919 35.29524713638729 19.9052734949857 9.826683572547815 11 22.80144902213431 25.146999875728692 35.614708490346544 16.43684261179045 12 23.53717253809663 23.201312977755435 35.68805659296662 17.573457891181317 13 20.86860972175374 26.1012259878401 36.5788389322385 16.45132535816766 14 17.387564833649307 29.37376604664939 35.36995007657168 17.86871904312962 15 16.171528041867283 27.112869181556643 40.72898670297008 15.986616073605989 16 19.59926707959624 26.05469432528622 38.49275722525529 15.853281369862247 17 19.044951641642662 26.056376192607445 34.939345323801504 19.95932684194839 18 19.34203481652229 26.605879621280852 36.57369989320142 17.47838566899543 19 21.650070685146027 27.58799669980257 33.166423574547366 17.595509040504037 20 22.7598695244707 27.501380532759505 33.244583686447605 16.494166256322185 21 21.458477966136535 27.54482877189114 35.073707835352664 15.922985426619663 22 21.012222503571632 25.03380086130294 34.82586599815555 19.128110636969872 23 18.80453805178096 28.735777709464895 34.234829790355235 18.224854448398908 24 17.96122174579697 28.19131988275516 36.72857184236418 17.118886529083692 25 18.785430170270377 28.66401803709265 35.23231726745147 17.318234525185495 26 18.007846845424247 30.389286878912092 33.79908599854799 17.80378027711567 27 18.08357759341605 29.709485451380484 34.76312300336654 17.443813951836926 28 16.763545338938314 29.208709456485888 37.02957937432667 16.998165830249132 29 17.71235210079244 27.237000333570354 36.87760397443935 18.173043591197853 30 18.206120315181938 28.427528804313802 35.88675052955461 17.47960035094965 31 19.506016880341683 27.948897395815326 34.395728430752385 18.14935729309061 32 20.44239651143343 28.484525419088634 34.20712569809174 16.865952371386204 33 19.81538703037359 28.94881423682 32.91204114221216 18.32375759059425 34 18.428266957193674 29.44893617220079 33.203611529761105 18.91918534084443 35 18.59066059076524 29.509530114301576 33.102372460730734 18.797436834202454 36 20.479397592500366 30.237031167804574 31.13407379099435 18.14949744870071 37 18.876251005616503 31.342672057362886 31.688435947484628 18.092640989535983 38 18.76552807363589 32.05232662984623 30.012595317494505 19.169549979023376 39 18.913579116440346 31.722727353422925 30.229089016565457 19.13460451357127 40 20.099716044733935 30.840214195147063 30.613162106781754 18.446907653337245 41 18.263770989470576 30.447171145884237 30.70664589871982 20.582411965925367 42 19.348809004343888 31.284694353317345 29.89710709477042 19.469389547568348 43 19.478312788078178 30.398957616009138 30.518323477279374 19.604406118633314 44 19.32077788232348 31.38051407209044 30.312014419209167 18.986693626376912 45 18.681060959281055 31.41630047120316 29.567320944200315 20.335317625315465 46 19.418699935248107 31.63293432588422 29.61235761357977 19.336008125287904 47 19.12876469648368 30.541215560262707 31.051709010791047 19.27831073246256 48 19.362918002427495 29.95008591538899 31.21924168339969 19.467754398783825 49 18.705448035438813 29.76022178223743 31.434520700516426 20.099809481807334 50 17.974816839976864 31.467503987427108 31.109780151909995 19.447899020686034 51 17.799342016129106 31.426017926836902 30.48235020401985 20.29228985301414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1758.0 1 2307.5 2 2857.0 3 37634.0 4 72411.0 5 47620.5 6 22830.0 7 23221.0 8 23612.0 9 25565.5 10 27519.0 11 29025.5 12 30532.0 13 31094.5 14 31657.0 15 30394.5 16 29132.0 17 27157.0 18 25182.0 19 23646.5 20 22111.0 21 21681.0 22 21251.0 23 21713.0 24 22175.0 25 23783.5 26 29092.5 27 32793.0 28 37847.0 29 42901.0 30 47512.0 31 52123.0 32 57109.0 33 62095.0 34 69179.5 35 76264.0 36 80149.5 37 84035.0 38 92847.5 39 101660.0 40 111859.0 41 122058.0 42 135573.0 43 149088.0 44 162153.5 45 175219.0 46 170103.0 47 164987.0 48 156803.0 49 148619.0 50 137375.5 51 126132.0 52 117211.0 53 108290.0 54 97751.0 55 87212.0 56 79284.5 57 71357.0 58 64255.0 59 57153.0 60 50184.0 61 43215.0 62 36527.5 63 29840.0 64 24374.0 65 18908.0 66 15281.0 67 11654.0 68 9511.5 69 7369.0 70 5455.0 71 3541.0 72 2890.0 73 2239.0 74 1867.5 75 1185.5 76 875.0 77 652.0 78 429.0 79 365.0 80 301.0 81 210.0 82 119.0 83 85.5 84 52.0 85 36.0 86 20.0 87 12.0 88 4.0 89 3.5 90 3.0 91 3.5 92 4.0 93 4.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2140478.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.672343148863092 #Duplication Level Percentage of deduplicated Percentage of total 1 78.30664073322625 21.66928233204577 2 6.985211042654759 3.8659431387914047 3 3.059306781658177 2.539745611790672 4 1.8625853629708662 2.061684052327181 5 1.2036001750243686 1.6653218528653004 6 0.8686939376605853 1.4423278040568481 7 0.6596240814134124 1.277734075108789 8 0.5278041479305593 1.168446199754219 9 0.42814561479435415 1.066301313324329 >10 4.726024100056264 30.3348901381651 >50 1.1965657555804627 23.044851931625583 >100 0.17168608851198605 6.093394256002127 >500 0.0023987708020853683 0.4505753015348008 >1k 0.0015420669441977368 0.809926055016044 >5k 0.0 0.0 >10k+ 1.713407715775263E-4 2.5095759375918627 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52929 2.4727654290303382 No Hit GAATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 3946 0.18435134582088672 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCG 3258 0.1522089925708183 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041392623516803256 0.0 2 0.0 0.0 0.0 0.13674515692289294 0.0 3 0.0 0.0 0.0 0.21383074247901637 0.0 4 0.0 0.0 0.0 0.38827775851935875 0.0 5 0.0 0.0 0.0 0.849670026975283 0.0 6 0.0 0.0 0.0 1.3991267371119909 0.0 7 0.0 0.0 0.0 1.7404523662471654 0.0 8 0.0 0.0 0.0 2.2582339085008116 0.0 9 0.0 0.0 0.0 2.532331563323706 0.0 10 0.0 0.0 0.0 3.023343384047862 0.0 11 0.0 0.0 0.0 3.3235567008864377 0.0 12 0.0 0.0 0.0 3.626526411390353 0.0 13 0.0 0.0 0.0 3.7836875688514433 0.0 14 0.0 0.0 0.0 3.8734338778534516 0.0 15 0.0 0.0 0.0 3.958461614648691 0.0 16 0.0 0.0 0.0 4.079789654460359 0.0 17 0.0 0.0 0.0 4.2134513879610065 0.0 18 0.0 0.0 0.0 4.388692619125261 0.0 19 0.0 0.0 0.0 4.510674718450739 0.0 20 0.0 0.0 0.0 4.630087298257679 0.0 21 0.0 0.0 0.0 4.779960363993463 0.0 22 0.0 0.0 0.0 4.950062556120642 0.0 23 0.0 0.0 0.0 5.132872190230406 0.0 24 0.0 0.0 0.0 5.286295864755442 0.0 25 0.0 0.0 0.0 5.41995759825609 0.0 26 0.0 0.0 0.0 5.548760603939868 0.0 27 0.0 0.0 0.0 5.681814996463407 0.0 28 0.0 0.0 0.0 5.825754808038204 0.0 29 0.0 0.0 0.0 5.979318638173343 0.0 30 0.0 0.0 0.0 6.178012574761338 0.0 31 0.0 0.0 0.0 6.344797750782769 0.0 32 0.0 0.0 0.0 6.511115741437193 0.0 33 4.6718536700680875E-5 0.0 0.0 6.665567223769644 0.0 34 4.6718536700680875E-5 0.0 0.0 6.830577095396449 0.0 35 4.6718536700680875E-5 0.0 0.0 7.0068928529048184 0.0 36 4.6718536700680875E-5 0.0 0.0 7.186712500665739 0.0 37 4.6718536700680875E-5 0.0 0.0 7.358730152797646 0.0 38 4.6718536700680875E-5 0.0 0.0 7.54910818985292 0.0 39 4.6718536700680875E-5 0.0 0.0 7.780364946521291 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTA 20 7.034653E-4 45.0 40 CGTACCG 25 3.8919377E-5 45.0 12 ATTACGC 30 2.1663836E-6 44.999996 26 CGTTTTT 23895 0.0 44.08663 1 ATACGAG 90 0.0 42.500004 1 CGTTCGA 75 0.0 42.000004 14 TAATGCG 75 0.0 42.000004 1 TATAACG 95 0.0 40.263157 1 AATCGCG 45 1.929584E-8 40.000004 1 CGAGCTA 40 3.4600816E-7 39.375 38 GACCGAA 75 0.0 39.000004 9 TCGTGCG 75 0.0 39.000004 1 CGTGCGG 210 0.0 38.57143 2 AGCGTTA 35 6.250815E-6 38.571426 33 GCGGGCT 310 0.0 38.46774 5 TAAGGGA 3325 0.0 38.436092 4 GTTTTTT 27875 0.0 38.195515 2 TGGGCGA 950 0.0 38.131584 6 AAGGGAT 3765 0.0 38.12749 5 AGGGATC 2715 0.0 37.87293 6 >>END_MODULE