##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547309_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1449505 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.270743460698654 31.0 31.0 33.0 30.0 34.0 2 31.654524820542186 31.0 31.0 34.0 30.0 34.0 3 31.52220102724723 31.0 31.0 34.0 30.0 34.0 4 35.413882670290896 37.0 35.0 37.0 33.0 37.0 5 35.37174690670263 37.0 35.0 37.0 33.0 37.0 6 35.43156801804754 37.0 35.0 37.0 33.0 37.0 7 35.919429046467584 37.0 35.0 37.0 35.0 37.0 8 35.939087481588544 37.0 35.0 37.0 35.0 37.0 9 37.68635016781591 39.0 37.0 39.0 35.0 39.0 10 36.90114832304821 39.0 37.0 39.0 32.0 39.0 11 36.65481043528653 39.0 35.0 39.0 32.0 39.0 12 36.304615023749484 38.0 35.0 39.0 32.0 39.0 13 36.11453358215391 38.0 35.0 39.0 31.0 39.0 14 37.270686199771646 39.0 35.0 41.0 32.0 41.0 15 37.430471781746185 39.0 35.0 41.0 32.0 41.0 16 37.522997850990514 39.0 35.0 41.0 32.0 41.0 17 37.44476355721436 39.0 35.0 41.0 32.0 41.0 18 37.20054846309602 39.0 36.0 40.0 32.0 41.0 19 36.95331440733216 38.0 35.0 40.0 32.0 41.0 20 36.630189616455276 38.0 35.0 40.0 32.0 41.0 21 36.496621260361295 38.0 35.0 40.0 31.0 41.0 22 36.395509501519484 38.0 35.0 40.0 31.0 41.0 23 36.301516034784285 38.0 35.0 40.0 31.0 41.0 24 36.13482188747193 37.0 35.0 40.0 31.0 41.0 25 36.01106170727248 37.0 35.0 40.0 31.0 41.0 26 35.763016340060915 37.0 35.0 40.0 30.0 41.0 27 35.667767962166394 36.0 34.0 40.0 30.0 41.0 28 35.57052649007765 36.0 34.0 40.0 30.0 41.0 29 35.49316904736445 36.0 34.0 40.0 30.0 41.0 30 35.35538614906468 36.0 34.0 40.0 29.0 41.0 31 35.12565530991614 36.0 34.0 40.0 27.0 41.0 32 34.73497849265784 36.0 34.0 40.0 25.0 41.0 33 34.28525876074936 36.0 33.0 40.0 23.0 41.0 34 33.800496031403824 36.0 33.0 40.0 21.0 41.0 35 33.444990531250326 36.0 33.0 40.0 18.0 41.0 36 33.103528445917746 35.0 33.0 40.0 16.0 41.0 37 33.000094515024095 35.0 33.0 40.0 15.0 41.0 38 32.919999586065586 35.0 32.0 40.0 15.0 41.0 39 32.78335086805496 35.0 32.0 40.0 15.0 41.0 40 32.67828810524972 35.0 32.0 40.0 15.0 41.0 41 32.65909534634237 35.0 32.0 40.0 15.0 41.0 42 32.55569659987375 35.0 31.0 40.0 13.0 41.0 43 32.44931407618463 35.0 31.0 40.0 12.0 41.0 44 32.35133787051441 35.0 31.0 40.0 12.0 41.0 45 32.21532454182635 35.0 31.0 40.0 10.0 41.0 46 32.11485990044877 35.0 31.0 40.0 10.0 41.0 47 32.07255304397018 35.0 31.0 39.0 10.0 41.0 48 31.93725168247091 35.0 31.0 39.0 10.0 41.0 49 31.79723146867379 35.0 30.0 39.0 10.0 41.0 50 31.660037047129883 35.0 30.0 39.0 10.0 41.0 51 31.2353913922339 35.0 29.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 2.0 13 6.0 14 22.0 15 67.0 16 187.0 17 523.0 18 1057.0 19 2158.0 20 3780.0 21 6089.0 22 9425.0 23 14062.0 24 21260.0 25 31956.0 26 43294.0 27 45779.0 28 42348.0 29 41279.0 30 43343.0 31 49293.0 32 58880.0 33 73627.0 34 110144.0 35 158464.0 36 141279.0 37 132807.0 38 169542.0 39 248742.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.072069430598724 23.543071600304934 26.799493620235875 22.585365348860474 2 39.14612229692205 23.9198209043777 25.322506648821495 11.611550149878752 3 24.45531405548791 23.562181572329866 39.68327118568063 12.2992331865016 4 21.704374941790476 25.565348170582368 39.64829372785882 13.081983159768335 5 20.086512292127313 29.115663623098918 38.58413734343793 12.213686741335836 6 18.371237077485073 37.505838199937216 35.279974887979 8.842949834598707 7 79.16792284262559 2.9832253079499553 16.53598987240472 1.3128619770197412 8 79.60600342875671 2.5539753226101323 16.239405866140512 1.6006153824926441 9 75.403879255332 4.586324296915153 17.76337439332738 2.2464220544254765 10 36.928261716930955 24.66793836516604 26.080075612019275 12.323724305883733 11 29.104625372109787 25.890838596624366 30.515796772001476 14.488739259264369 12 25.986940369298484 23.180741011586715 34.49280961431661 16.339509004798188 13 18.2033866733816 31.075436097150405 35.75758621046495 14.963591019003038 14 16.280868296418433 33.53110199688859 35.0730076819328 15.115022024760178 15 15.009054815264522 28.81638904315611 42.36804978251196 13.806506359067406 16 16.34882252907027 25.940096791663358 42.00716796423606 15.703912715030302 17 16.48342020206898 27.73381257739711 34.468870407483934 21.313896813049972 18 18.2180123559422 28.430050258536532 36.738403799917904 16.61353358560336 19 21.081058706247997 31.26136163724858 31.415483216684315 16.24209643981911 20 22.170672057012567 28.97554682460564 32.47729397277001 16.37648714561178 21 18.66982176674106 31.790921728452126 33.82389160437529 15.715364900431528 22 19.67526845371351 28.638259267819016 32.90585406742302 18.780618211044462 23 17.287349819421113 32.98463958385794 31.650459984615438 18.07755061210551 24 16.922604613299022 30.263986671311933 37.63553764905951 15.17787106632954 25 16.0374748621081 31.556289905864414 36.123435241685954 16.28279999034153 26 16.04051038113011 35.390150430664264 32.56670380578197 16.002635382423655 27 15.996288388104904 34.816851269916285 32.8805350792167 16.306325262762115 28 15.645892908268685 32.7066136370692 36.55378905212469 15.093704402537417 29 16.096460515831268 30.50462054287498 35.93888948296142 17.460029458332325 30 16.284869662401995 34.30046809083101 33.530343117133086 15.884319129633909 31 20.500791649563126 32.92682674430237 30.623971631694957 15.948409974439551 32 21.09382168395418 32.535313779531634 30.812518756403044 15.558345780111141 33 20.67581691680953 32.98553644175081 29.643498987585414 16.69514765385425 34 17.541160603102437 33.918613595675765 30.272472326759825 18.26775347446197 35 18.897071758979788 32.78277756889421 30.342565220540806 17.977585451585195 36 22.209995826161343 33.03472564772112 27.539125425576316 17.21615310054122 37 18.462854560694858 35.94827199630218 29.44998464993222 16.138888793070738 38 18.23677738262372 36.166139475200154 27.960027733605607 17.63705540857051 39 18.146677658924943 36.15765381975226 28.12256597942056 17.573102541902237 40 20.21117553923581 33.47791142493472 27.84122855733509 18.469684478494383 41 16.834643550729385 32.15608086898631 29.62556182972808 21.383713750556225 42 17.69341947768376 33.48708697106944 27.964787979344674 20.854705571902134 43 18.270444048140572 34.16207601905478 28.22535969175684 19.342120241047805 44 17.59731770500964 35.49501381506101 28.53105025508708 18.37661822484227 45 17.184556107084834 37.91328763957351 25.988527117878174 18.913629135463488 46 19.11894060386132 36.633126481109066 26.644130237563857 17.603802677465755 47 18.641674226718777 33.93682670980783 27.80445738372755 19.617041679745846 48 18.547987071448528 33.04079668576514 29.573613061010484 18.837603181775847 49 17.977516462516512 33.20554258177792 29.76864515817469 19.04829579753088 50 17.70376783798607 35.271213276256375 28.652126070624114 18.372892815133444 51 16.52674533720132 36.30749807692971 27.29290343945002 19.87285314641895 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1823.0 1 1945.0 2 2067.0 3 30618.5 4 59170.0 5 38153.5 6 17137.0 7 18783.5 8 20430.0 9 24788.5 10 29147.0 11 32967.5 12 36788.0 13 37490.5 14 38193.0 15 35257.5 16 32322.0 17 29259.0 18 26196.0 19 23481.5 20 20767.0 21 19920.0 22 19073.0 23 17425.0 24 15777.0 25 15773.0 26 16587.5 27 17406.0 28 19785.5 29 22165.0 30 24027.0 31 25889.0 32 29779.0 33 33669.0 34 36914.0 35 40159.0 36 43631.0 37 47103.0 38 54410.5 39 61718.0 40 68700.5 41 75683.0 42 83006.0 43 90329.0 44 96410.5 45 102492.0 46 106143.5 47 109795.0 48 107100.5 49 104406.0 50 96683.5 51 88961.0 52 80500.5 53 72040.0 54 62906.0 55 53772.0 56 49825.5 57 45879.0 58 40576.0 59 35273.0 60 31803.5 61 28334.0 62 25057.5 63 21781.0 64 17875.5 65 13970.0 66 11243.0 67 8516.0 68 7102.5 69 5689.0 70 4563.5 71 3438.0 72 2974.0 73 2510.0 74 2169.0 75 1434.5 76 1041.0 77 793.0 78 545.0 79 390.0 80 235.0 81 188.5 82 142.0 83 88.0 84 34.0 85 25.0 86 16.0 87 13.0 88 10.0 89 7.5 90 5.0 91 7.5 92 10.0 93 6.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1449505.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.41745794673287 #Duplication Level Percentage of deduplicated Percentage of total 1 77.41424899016053 25.095731611164368 2 7.575291118839203 4.911433625584577 3 3.6016344299685943 3.502674980190364 4 2.2759239071289454 2.951186701972662 5 1.4856498433211982 2.408049565971761 6 1.0357240270732215 2.014532405524019 7 0.7867940084606057 1.7854103177409149 8 0.5878667508002577 1.5245716537879876 9 0.468773542994336 1.3676801954903874 >10 3.858661455087918 26.015192781852868 >50 0.7276107726288087 16.49843540895594 >100 0.17903051040204015 7.859648233709231 >500 0.0015026539954140017 0.2921341584497846 >1k 0.0010733242824385726 0.4769622491698006 >5k 0.0 0.0 >10k+ 2.1466485648771454E-4 3.296356110435408 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47369 3.2679431944008472 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTT 1719 0.11859220906447375 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCT 1588 0.10955464106712293 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.898906868206733E-5 0.0 0.0 0.03559835943994674 0.0 2 6.898906868206733E-5 0.0 0.0 0.13694330133390364 0.0 3 6.898906868206733E-5 0.0 0.0 0.2373223962663116 0.0 4 6.898906868206733E-5 0.0 0.0 0.38771856599321836 0.0 5 6.898906868206733E-5 0.0 0.0 0.7203838551781471 0.0 6 6.898906868206733E-5 0.0 0.0 1.4360764536859134 0.0 7 6.898906868206733E-5 0.0 0.0 1.902649525182735 0.0 8 6.898906868206733E-5 0.0 0.0 2.55556207118982 0.0 9 6.898906868206733E-5 0.0 0.0 2.930379681339492 0.0 10 6.898906868206733E-5 0.0 0.0 3.364320923349695 0.0 11 6.898906868206733E-5 0.0 0.0 3.747210254535169 0.0 12 6.898906868206733E-5 0.0 0.0 4.047243714233479 0.0 13 6.898906868206733E-5 0.0 0.0 4.25014056522744 0.0 14 6.898906868206733E-5 0.0 0.0 4.350450671091165 0.0 15 6.898906868206733E-5 0.0 0.0 4.438411733660802 0.0 16 6.898906868206733E-5 0.0 0.0 4.5802532588711315 0.0 17 6.898906868206733E-5 0.0 0.0 4.740997788900349 0.0 18 1.3797813736413466E-4 0.0 0.0 4.941204066215708 0.0 19 1.3797813736413466E-4 0.0 0.0 5.0626938161648285 0.0 20 1.3797813736413466E-4 0.0 0.0 5.190668538570064 0.0 21 1.3797813736413466E-4 0.0 0.0 5.352861839041604 0.0 22 1.3797813736413466E-4 0.0 0.0 5.521057188488484 0.0 23 1.3797813736413466E-4 0.0 0.0 5.7327156512050665 0.0 24 1.3797813736413466E-4 0.0 0.0 5.893046246822191 0.0 25 1.3797813736413466E-4 0.0 0.0 6.048616596700253 0.0 26 1.3797813736413466E-4 0.0 0.0 6.184318094797879 0.0 27 1.3797813736413466E-4 0.0 0.0 6.32381399167302 0.0 28 1.3797813736413466E-4 0.0 0.0 6.4697948610042735 0.0 29 1.3797813736413466E-4 0.0 0.0 6.629573544071942 0.0 30 1.3797813736413466E-4 0.0 0.0 6.8387484003159695 0.0 31 1.3797813736413466E-4 0.0 0.0 7.011428039227185 0.0 32 1.3797813736413466E-4 0.0 0.0 7.186315328336225 0.0 33 1.3797813736413466E-4 0.0 0.0 7.36803253524479 0.0 34 1.3797813736413466E-4 0.0 0.0 7.544299605727472 0.0 35 1.3797813736413466E-4 0.0 0.0 7.739331702891676 0.0 36 1.3797813736413466E-4 0.0 0.0 7.925464210195894 0.0 37 1.3797813736413466E-4 0.0 0.0 8.116908875788631 0.0 38 1.3797813736413466E-4 0.0 0.0 8.312699852708338 0.0 39 1.3797813736413466E-4 0.0 0.0 8.518701211792992 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 20 7.033896E-4 45.000004 12 TAACGCG 30 2.1658961E-6 45.000004 1 ACTTACG 40 6.8175723E-9 45.000004 1 AGTATCG 20 7.033896E-4 45.000004 33 TAATTCG 20 7.033896E-4 45.000004 24 CGCTAGT 30 2.1658961E-6 45.000004 42 CGCTAGA 30 2.1658961E-6 45.000004 23 ACGGACG 20 7.033896E-4 45.000004 1 CCGAACG 20 7.033896E-4 45.000004 15 CGGTACG 20 7.033896E-4 45.000004 1 TAGTACG 30 2.1658961E-6 45.000004 1 TCGTTAG 45 3.8562575E-10 45.0 1 CGACGGT 110 0.0 45.0 28 CGTTTTT 20320 0.0 44.158463 1 CGCAGTA 130 0.0 43.26923 37 GCGATCG 85 0.0 42.35294 9 TCACGAC 120 0.0 41.250004 25 CACGACG 120 0.0 41.250004 26 CGCACGA 60 3.6379788E-12 41.250004 39 GCCCTAC 450 0.0 41.0 26 >>END_MODULE