SRR1547308_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547308_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	897833
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14059	1.565881405562059	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1943	0.2164099559717676	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	995	0.11082239124647901	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAT	30	2.1649685E-6	45.000004	16
TTTAGCG	75	0.0	45.000004	1
AACGTAC	30	2.1649685E-6	45.000004	11
CTATGCG	35	1.2115379E-7	45.000004	1
TTGGCTA	30	2.1649685E-6	45.000004	22
CGGAACT	20	7.03246E-4	45.000004	13
GCCCATA	20	7.03246E-4	45.000004	27
TCGTTAA	20	7.03246E-4	45.000004	44
CGAACGT	20	7.03246E-4	45.000004	38
CTCGTTA	20	7.03246E-4	45.000004	43
TCACCGG	20	7.03246E-4	45.000004	2
GTCGATA	35	1.2115379E-7	45.000004	29
CTCAATC	25	3.8901206E-5	45.000004	27
GGTCGCT	20	7.03246E-4	45.000004	10
CGAGTAT	20	7.03246E-4	45.000004	42
CACGGGT	50	2.1827873E-11	45.000004	4
ACGCACT	25	3.8901206E-5	45.000004	15
CTATAGT	20	7.03246E-4	45.000004	40
GACGTAC	20	7.03246E-4	45.000004	9
CGCATGG	45	3.8380676E-10	45.000004	2