##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547308_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 897833 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326246640522236 31.0 31.0 33.0 30.0 34.0 2 31.716491819748217 31.0 31.0 34.0 30.0 34.0 3 31.730368565200877 31.0 31.0 34.0 30.0 34.0 4 35.53212345725764 37.0 35.0 37.0 33.0 37.0 5 35.44524427148479 37.0 35.0 37.0 33.0 37.0 6 35.48702041470964 37.0 35.0 37.0 33.0 37.0 7 35.90010614446116 37.0 35.0 37.0 35.0 37.0 8 35.89776829321266 37.0 35.0 37.0 35.0 37.0 9 37.6732944768125 39.0 37.0 39.0 35.0 39.0 10 37.01708335514511 39.0 37.0 39.0 33.0 39.0 11 36.67567910736184 39.0 35.0 39.0 32.0 39.0 12 35.74620335853104 37.0 35.0 39.0 31.0 39.0 13 35.183081931717815 37.0 35.0 39.0 30.0 39.0 14 36.17980181169549 38.0 35.0 41.0 30.0 41.0 15 36.54376036523496 38.0 35.0 41.0 31.0 41.0 16 36.793415924787794 38.0 35.0 41.0 32.0 41.0 17 36.73410422650983 38.0 35.0 41.0 32.0 41.0 18 36.62061541511618 38.0 35.0 40.0 31.0 41.0 19 36.46483922956719 37.0 35.0 40.0 31.0 41.0 20 36.231153232282615 37.0 35.0 40.0 31.0 41.0 21 36.04120253989328 36.0 34.0 40.0 31.0 41.0 22 35.90807978766652 36.0 34.0 40.0 30.0 41.0 23 35.892544604620234 36.0 34.0 40.0 31.0 41.0 24 35.75206636423477 36.0 34.0 40.0 30.0 41.0 25 35.66128778960007 35.0 34.0 40.0 30.0 41.0 26 35.42099700055578 35.0 34.0 40.0 30.0 41.0 27 35.3561775965018 35.0 34.0 40.0 30.0 41.0 28 35.40960178563274 36.0 34.0 40.0 30.0 41.0 29 35.46441376068824 36.0 34.0 40.0 30.0 41.0 30 35.41075121988165 36.0 34.0 40.0 30.0 41.0 31 35.22797780879072 36.0 34.0 40.0 29.0 41.0 32 34.91368216583707 35.0 34.0 40.0 27.0 41.0 33 34.651536532963256 35.0 34.0 40.0 26.0 41.0 34 34.42423702403454 35.0 34.0 40.0 24.0 41.0 35 34.23509383148091 35.0 33.0 40.0 24.0 41.0 36 33.94210170488276 35.0 33.0 40.0 23.0 41.0 37 33.85536062942663 35.0 33.0 40.0 23.0 41.0 38 33.80068899227362 35.0 33.0 40.0 23.0 41.0 39 33.753709208728125 35.0 33.0 40.0 23.0 41.0 40 33.56736720525978 35.0 33.0 40.0 22.0 41.0 41 33.58560556361818 35.0 33.0 40.0 22.0 41.0 42 33.50935641706197 35.0 33.0 40.0 21.0 41.0 43 33.37873969880813 35.0 33.0 40.0 21.0 41.0 44 33.267656680028466 35.0 33.0 40.0 20.0 41.0 45 33.08572418255956 35.0 32.0 39.0 20.0 41.0 46 33.03217079345491 35.0 32.0 39.0 20.0 41.0 47 33.01086839089229 35.0 32.0 39.0 20.0 41.0 48 32.95196656839301 35.0 32.0 39.0 20.0 41.0 49 32.8733506119735 35.0 32.0 39.0 19.0 41.0 50 32.67706243811488 35.0 32.0 39.0 18.0 41.0 51 32.16996256542141 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 7.0 14 12.0 15 51.0 16 109.0 17 259.0 18 610.0 19 1106.0 20 1983.0 21 3117.0 22 4750.0 23 6871.0 24 10079.0 25 14469.0 26 19047.0 27 21768.0 28 22969.0 29 24726.0 30 27861.0 31 32891.0 32 40416.0 33 52363.0 34 89934.0 35 137295.0 36 66568.0 37 69530.0 38 96721.0 39 152260.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.781336841038364 24.44263019960282 28.0387332610853 16.737299698273507 2 32.66153059644722 26.154418472032106 28.8222865499486 12.361764381572074 3 26.576211834494835 25.72293511154079 34.43101333989729 13.269839714067091 4 23.572423824920673 28.87385516014671 33.20818014040473 14.34554087452789 5 21.502105625433682 31.798118358313854 32.697506106369445 14.002269909883019 6 19.858147339204507 40.433577291099795 30.19492489137735 9.513350478318351 7 85.01258029054401 3.7603875108177136 9.868650406033193 1.3583817926050836 8 85.49128846901372 3.413329650391554 9.084762979306841 2.010618901287879 9 82.31074152988363 4.476110813480903 10.825732625109568 2.387415031525907 10 48.81731903371785 26.5963714855658 15.24838138050172 9.337928100214627 11 43.43257599130351 21.056699853981755 23.21857182794573 12.29215232676901 12 40.31261938467399 21.509902175571625 24.730657037555982 13.446821402198406 13 21.0386564093768 40.26996111749067 25.477566540770948 13.213815932361586 14 15.014596255651105 43.092312267426124 26.393327044116223 15.499764432806545 15 13.605982404300132 25.820057850402023 47.09272214320481 13.48123760209304 16 15.656252332003836 21.092341226040922 47.25399935177255 15.997407090182694 17 15.545095802894302 22.185417555380564 29.056851329813004 33.21263531191212 18 19.71123805874812 25.247679690989305 35.469291059695955 19.57179119056662 19 26.293308443775175 27.171756885746014 27.140682064481926 19.394252605996883 20 29.784380836970797 25.009884911782038 26.949889344677686 18.255844906569486 21 20.948773324215082 31.771053191406416 29.72479291805937 17.555380566319126 22 21.998634489932982 26.41348669518719 26.87047591255835 24.717402902321478 23 18.534515884357113 32.76745229903557 25.239326244412936 23.458705572194383 24 18.66482965094845 25.53849101113459 39.65058089867492 16.14609843924204 25 16.40516666239713 26.5277618443519 37.01122591840576 20.05584557484521 26 15.729762661875874 35.6814686027357 29.320597483050857 19.268171252337574 27 16.61378006823095 36.79114044594039 28.625479348609375 17.96960013721928 28 14.511273254603028 31.353269483300345 38.24631083954365 15.889146422552969 29 15.458442717075446 25.951596789157893 37.61434476121951 20.975615732547144 30 16.661116265497036 33.421471476321315 32.633685774526 17.283726483655645 31 26.92661107355154 28.860155507761466 26.16455398721143 18.048679431475563 32 27.44107200336811 28.781410351368237 28.00643326765668 15.771084377606973 33 26.382746011786157 29.300326452692204 24.99707629369827 19.31985124182337 34 19.192878853862577 29.24441405027438 28.20390874472201 23.358798351141026 35 17.836056371285082 28.053101189196656 31.45696360013499 22.65387883938327 36 27.847272265554952 27.201383776270198 26.606841138608182 18.344502819566667 37 19.36172985399289 33.59689385442504 28.93210652760591 18.10926976397615 38 19.10622576804372 34.935227375246846 25.107787305657066 20.850759551052366 39 19.111571973852598 33.70793900424689 27.36243822626257 19.818050795637944 40 23.47953349899146 27.892492256355023 26.471849441934083 22.156124802719436 41 16.284320135259005 26.840292125595738 29.00695340893017 27.868434330215088 42 19.947362148640117 27.321450648394524 26.370048772990078 26.361138429975284 43 20.410477226833944 28.6223607285542 26.57688011022094 24.390281934390917 44 18.966778899862224 31.639737011225915 28.10934772947753 21.284136359434328 45 16.823730025516994 37.18720519294791 23.689372076989816 22.299692704545276 46 20.866464030615937 33.84493552809932 26.23516845560366 19.05343198568108 47 19.591950841637587 29.01085168399914 27.803834343357842 23.593363131005432 48 21.3035163554915 26.247977073687423 31.54094358304941 20.90756298777167 49 20.48833134892569 25.585270311962248 31.87497006681643 22.051428272295627 50 18.24325904706109 32.89832296206533 28.23709977245212 20.621318218421468 51 17.459482999622423 33.67129521859856 26.01463746598755 22.854584315791467 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1305.0 1 1456.0 2 1607.0 3 9935.5 4 18264.0 5 11929.5 6 5595.0 7 6132.5 8 6670.0 9 8084.0 10 9498.0 11 10145.5 12 10793.0 13 10742.0 14 10691.0 15 9677.5 16 8664.0 17 7834.5 18 7005.0 19 6441.5 20 5878.0 21 6048.0 22 6218.0 23 5706.0 24 5194.0 25 6097.5 26 7164.0 27 7327.0 28 9036.5 29 10746.0 30 11927.5 31 13109.0 32 14773.0 33 16437.0 34 19185.5 35 21934.0 36 23443.5 37 24953.0 38 28777.5 39 32602.0 40 45151.0 41 57700.0 42 69067.5 43 80435.0 44 82829.5 45 85224.0 46 86169.5 47 87115.0 48 83139.5 49 79164.0 50 71875.5 51 64587.0 52 58076.0 53 51565.0 54 43062.0 55 34559.0 56 32796.5 57 31034.0 58 28777.5 59 26521.0 60 23764.5 61 21008.0 62 18810.5 63 16613.0 64 14049.5 65 11486.0 66 8970.5 67 6455.0 68 5578.0 69 4701.0 70 3934.0 71 3167.0 72 2707.0 73 2247.0 74 1719.0 75 971.5 76 752.0 77 584.5 78 417.0 79 341.5 80 266.0 81 170.0 82 74.0 83 49.0 84 24.0 85 22.0 86 20.0 87 13.5 88 7.0 89 5.5 90 4.0 91 3.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 897833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.575580751612616 #Duplication Level Percentage of deduplicated Percentage of total 1 82.36210156993235 20.240964780043928 2 7.023024495879884 3.451898112380991 3 2.3836559197349687 1.7573918561851847 4 1.2387879434612854 1.2177573255462777 5 0.7499860162875076 0.9215670952926948 6 0.5239622975172208 0.7726006652060962 7 0.400659457819445 0.6892507201677369 8 0.30876183634241866 0.6070401153639446 9 0.23426606431067365 0.5181502122746491 >10 2.6802102176940625 15.772186012252803 >50 1.233634089669608 22.325300747480696 >100 0.8577647580315989 29.544636610670782 >500 0.002275238084964453 0.3917425727870356 >1k 4.550476169928906E-4 0.21728684525412797 >5k 0.0 0.0 >10k+ 4.550476169928906E-4 1.5722263290930443 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14059 1.565881405562059 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1943 0.2164099559717676 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 995 0.11082239124647901 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1137928768490353E-4 0.0 0.0 0.05401895452717822 0.0 2 1.1137928768490353E-4 0.0 0.0 0.1988120285175528 0.0 3 1.1137928768490353E-4 0.0 0.0 0.2943754573512001 0.0 4 1.1137928768490353E-4 0.0 0.0 0.5693709186452269 0.0 5 1.1137928768490353E-4 0.0 0.0 1.0261373774410163 0.0 6 1.1137928768490353E-4 0.0 0.0 1.5382593422162028 0.0 7 1.1137928768490353E-4 0.0 0.0 1.838203763951648 0.0 8 1.1137928768490353E-4 0.0 0.0 2.428402609393952 0.0 9 1.1137928768490353E-4 0.0 0.0 2.6408029110090627 0.0 10 1.1137928768490353E-4 0.0 0.0 3.0693904100205716 0.0 11 1.1137928768490353E-4 0.0 0.0 3.5431978998321516 0.0 12 1.1137928768490353E-4 0.0 0.0 3.9667733308978397 0.0 13 1.1137928768490353E-4 0.0 0.0 4.123261230095129 0.0 14 1.1137928768490353E-4 0.0 0.0 4.182849149006552 0.0 15 1.1137928768490353E-4 0.0 0.0 4.273066372031324 0.0 16 1.1137928768490353E-4 0.0 0.0 4.4590697824651135 0.0 17 1.1137928768490353E-4 0.0 0.0 4.657324914544241 0.0 18 1.1137928768490353E-4 0.0 0.0 4.908707966849069 0.0 19 1.1137928768490353E-4 0.0 0.0 5.054948971579347 0.0 20 1.1137928768490353E-4 0.0 0.0 5.1967348048022295 0.0 21 1.1137928768490353E-4 0.0 0.0 5.3992223498133844 0.0 22 1.1137928768490353E-4 0.0 0.0 5.588455759590035 0.0 23 1.1137928768490353E-4 0.0 0.0 5.8000764061913515 0.0 24 1.1137928768490353E-4 0.0 0.0 5.971823267801473 0.0 25 1.1137928768490353E-4 0.0 0.0 6.1079287573524255 0.0 26 1.1137928768490353E-4 0.0 0.0 6.246261832657075 0.0 27 1.1137928768490353E-4 0.0 0.0 6.365771808342977 0.0 28 1.1137928768490353E-4 0.0 0.0 6.490627989837754 0.0 29 1.1137928768490353E-4 0.0 0.0 6.632302443772951 0.0 30 1.1137928768490353E-4 0.0 0.0 6.812514131247125 0.0 31 1.1137928768490353E-4 0.0 0.0 6.975796166993193 0.0 32 1.1137928768490353E-4 0.0 0.0 7.125935446792443 0.0 33 1.1137928768490353E-4 0.0 0.0 7.271619555084297 0.0 34 1.1137928768490353E-4 0.0 0.0 7.420199524855959 0.0 35 1.1137928768490353E-4 0.0 0.0 7.621907414853319 0.0 36 1.1137928768490353E-4 0.0 0.0 7.785189450599388 0.0 37 1.1137928768490353E-4 0.0 0.0 7.945241487002594 0.0 38 1.1137928768490353E-4 0.0 0.0 8.107075592008758 0.0 39 1.1137928768490353E-4 0.0 0.0 8.263006594767624 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 30 2.1649685E-6 45.000004 16 TTTAGCG 75 0.0 45.000004 1 AACGTAC 30 2.1649685E-6 45.000004 11 CTATGCG 35 1.2115379E-7 45.000004 1 TTGGCTA 30 2.1649685E-6 45.000004 22 CGGAACT 20 7.03246E-4 45.000004 13 GCCCATA 20 7.03246E-4 45.000004 27 TCGTTAA 20 7.03246E-4 45.000004 44 CGAACGT 20 7.03246E-4 45.000004 38 CTCGTTA 20 7.03246E-4 45.000004 43 TCACCGG 20 7.03246E-4 45.000004 2 GTCGATA 35 1.2115379E-7 45.000004 29 CTCAATC 25 3.8901206E-5 45.000004 27 GGTCGCT 20 7.03246E-4 45.000004 10 CGAGTAT 20 7.03246E-4 45.000004 42 CACGGGT 50 2.1827873E-11 45.000004 4 ACGCACT 25 3.8901206E-5 45.000004 15 CTATAGT 20 7.03246E-4 45.000004 40 GACGTAC 20 7.03246E-4 45.000004 9 CGCATGG 45 3.8380676E-10 45.000004 2 >>END_MODULE