##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547307_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2745685 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.235682170387353 31.0 31.0 33.0 30.0 34.0 2 31.622937809690477 31.0 31.0 34.0 30.0 34.0 3 31.594857385315503 31.0 31.0 34.0 30.0 34.0 4 35.4515831204235 37.0 35.0 37.0 33.0 37.0 5 35.38339649304272 37.0 35.0 37.0 33.0 37.0 6 35.42202911113256 37.0 35.0 37.0 33.0 37.0 7 35.87178609345209 37.0 35.0 37.0 35.0 37.0 8 35.87509018696609 37.0 35.0 37.0 35.0 37.0 9 37.59516732618636 39.0 37.0 39.0 35.0 39.0 10 36.836362510630316 39.0 37.0 39.0 32.0 39.0 11 36.6081954047897 39.0 35.0 39.0 32.0 39.0 12 36.27273012017038 38.0 35.0 39.0 32.0 39.0 13 36.126102957913965 38.0 35.0 39.0 31.0 39.0 14 37.18434926074914 39.0 36.0 41.0 31.0 41.0 15 37.336795007438944 39.0 36.0 41.0 32.0 41.0 16 37.41716402282126 39.0 36.0 41.0 32.0 41.0 17 37.34487495834373 39.0 35.0 41.0 32.0 41.0 18 37.1286779073346 39.0 36.0 40.0 32.0 41.0 19 36.95684792683793 38.0 35.0 40.0 31.0 41.0 20 36.69677548589878 38.0 35.0 40.0 31.0 41.0 21 36.575366802819694 38.0 35.0 40.0 31.0 41.0 22 36.48515980529449 38.0 35.0 40.0 31.0 41.0 23 36.37815044333199 38.0 35.0 40.0 31.0 41.0 24 36.23612431870371 38.0 35.0 40.0 30.0 41.0 25 36.102127155882776 38.0 35.0 40.0 30.0 41.0 26 35.870326348434 37.0 35.0 40.0 30.0 41.0 27 35.82130360911758 37.0 34.0 40.0 30.0 41.0 28 35.79476378390092 38.0 34.0 40.0 30.0 41.0 29 35.736605983570584 38.0 34.0 40.0 29.0 41.0 30 35.64514720370327 37.0 34.0 40.0 29.0 41.0 31 35.48408867004044 37.0 34.0 40.0 28.0 41.0 32 35.17667540158467 37.0 34.0 40.0 26.0 41.0 33 34.84712048177413 37.0 34.0 40.0 24.0 41.0 34 34.46152854387885 37.0 33.0 40.0 23.0 41.0 35 34.200874463021066 37.0 33.0 40.0 21.0 41.0 36 33.906011432484064 37.0 33.0 40.0 20.0 41.0 37 33.829821337844656 37.0 33.0 40.0 20.0 41.0 38 33.73311323039606 37.0 33.0 40.0 19.0 41.0 39 33.57465441228692 37.0 33.0 40.0 18.0 41.0 40 33.452962011301366 36.0 33.0 40.0 18.0 41.0 41 33.39864623946301 36.0 33.0 40.0 18.0 41.0 42 33.29184629700785 36.0 32.0 40.0 18.0 41.0 43 33.16516825491635 36.0 32.0 40.0 18.0 41.0 44 33.0532941688504 36.0 32.0 40.0 17.0 41.0 45 32.90726685690456 35.0 31.0 40.0 17.0 41.0 46 32.8160673930185 35.0 31.0 40.0 17.0 41.0 47 32.77006065881556 35.0 31.0 40.0 17.0 41.0 48 32.61645308911984 35.0 31.0 40.0 17.0 41.0 49 32.47788657475275 35.0 31.0 39.0 15.0 41.0 50 32.34368363450287 35.0 31.0 39.0 15.0 41.0 51 31.906995522064623 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 10.0 13 19.0 14 48.0 15 153.0 16 368.0 17 932.0 18 2131.0 19 3939.0 20 6681.0 21 10590.0 22 15853.0 23 23260.0 24 33985.0 25 49423.0 26 67492.0 27 76323.0 28 74949.0 29 77025.0 30 83689.0 31 95992.0 32 114493.0 33 141778.0 34 204480.0 35 261709.0 36 250102.0 37 273686.0 38 362800.0 39 513596.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.25405864110413 21.850576449956932 26.75241333219215 20.142951576746785 2 36.68738402256631 23.68713089811832 26.975126425646057 12.650358653669302 3 26.398111946563425 24.277184017831615 36.37696968151845 12.947734354086505 4 23.405707501042546 26.76840205631746 35.94381729877972 13.882073143860275 5 21.1909232122403 30.781608232553992 34.56193991663283 13.465528638572888 6 20.863463944334473 38.43933298976394 31.331234282155457 9.365968783746133 7 82.89953144661533 2.968075361886014 12.664963388007 1.4674298034916604 8 83.18201104642375 2.4905988851598053 12.688819001451368 1.6385710669650742 9 78.1411196113174 4.841742588825739 14.384862065386233 2.632275734470633 10 36.158335715859614 29.502510302529238 22.790524040448922 11.548629941162224 11 29.96039239752557 24.681928189140415 29.20910446755546 16.148574945778556 12 26.703026749244724 22.226584622780837 33.067995782473226 18.002392845501213 13 22.105194150093695 26.432820953605386 34.33179698326647 17.130187913034455 14 19.230465257303734 28.268938352360156 34.776021284306104 17.72457510603001 15 18.29976854591841 25.482675543625728 39.07010454586014 17.14745136459572 16 21.524027701648222 24.51344564289057 36.52640415779669 17.436122497664517 17 21.426711367108755 25.183478804014296 32.05415042147952 21.335659407397426 18 21.747724156267015 25.803360545729028 34.11414637877251 18.334768919231447 19 23.809359048834807 27.340244784088487 30.49235436694304 18.358041800133666 20 24.40622285513451 27.0534311109978 31.12898966924465 17.411356364623035 21 23.570402285768395 26.962561255205898 32.324611162606054 17.142425296419656 22 22.981988101329907 25.143343100173542 31.73965695263659 20.13501184585996 23 20.363697947870932 27.439200053902763 32.32031351010768 19.87678848811863 24 20.432023338438313 26.634847041812883 34.97094531965612 17.96218430009269 25 20.952439919364384 27.36992772295438 32.77247754203414 18.905154815647094 26 20.13665078113476 28.950079852568667 31.284870624270443 19.628398742026125 27 19.449572693153076 28.48454939295658 32.78092716389535 19.28495074999499 28 19.208722049324667 28.029253173616052 33.57377120827771 19.188253568781562 29 19.513855376709273 26.933606732017694 33.66078046097786 19.891757430295172 30 20.56991242622515 28.077474291479177 32.76217046019482 18.59044282210086 31 23.252776629511395 27.299089298298966 30.746935646295913 18.70119842589372 32 23.90485434418005 27.37080182176761 30.025913387733844 18.698430446318497 33 23.0243818937715 27.621923126651453 29.905105647588854 19.44858933198819 34 19.934624692927265 28.46218703165148 30.860349967312345 20.742838308108904 35 20.58477210605004 28.97670344558826 30.71339210433826 19.72513234402344 36 23.575391933160578 28.978925113405218 28.07110065429938 19.374582299134822 37 20.294862666329166 31.21195621493361 29.22658644382003 19.26659467491719 38 20.919005639758385 30.879361616500073 28.641122342876184 19.560510400865358 39 20.40081072664927 30.855360319920166 28.261508512447715 20.48232044098285 40 22.534995820715046 28.968399506862585 28.307507962493876 20.18909670992849 41 19.749534269226075 28.486989585476845 29.15680422189727 22.60667192339981 42 20.58954322873891 29.434330595097396 28.40194705510647 21.57417912105722 43 20.37116420856726 28.976594183236603 29.2130014914311 21.43924011676503 44 20.599850310578237 29.75009879137629 28.85502160663004 20.79502929141544 45 19.612519280252467 30.893929930053886 27.88502686943331 21.608523920260335 46 20.80566416030972 30.48102750315495 28.223667317991683 20.48964101854364 47 20.428417680833743 29.559836616363494 29.098348863762595 20.913396839040168 48 20.892891937713177 29.019716391355892 29.798392750807174 20.288998920123756 49 21.13315984899943 28.50341535900877 29.510559295767724 20.852865496224073 50 20.11308653396147 30.06830718017544 29.38661936820866 20.43198691765443 51 19.277994380273046 30.24305410125342 28.986901265075925 21.492050253397604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2772.0 1 3539.5 2 4307.0 3 45154.5 4 86002.0 5 56319.0 6 26636.0 7 27889.5 8 29143.0 9 32464.5 10 35786.0 11 38666.5 12 41547.0 13 41546.0 14 41545.0 15 38791.5 16 36038.0 17 33239.0 18 30440.0 19 27613.0 20 24786.0 21 23787.5 22 22789.0 23 22999.5 24 23210.0 25 25298.5 26 29228.5 27 31070.0 28 35095.5 29 39121.0 30 43306.0 31 47491.0 32 52635.5 33 57780.0 34 69261.5 35 80743.0 36 82214.0 37 83685.0 38 94150.0 39 104615.0 40 117209.0 41 129803.0 42 140263.0 43 150723.0 44 157686.5 45 164650.0 46 171058.0 47 177466.0 48 180259.5 49 183053.0 50 177217.0 51 171381.0 52 163687.0 53 155993.0 54 147698.5 55 139404.0 56 130026.0 57 120648.0 58 117721.0 59 114794.0 60 103413.5 61 92033.0 62 84343.0 63 76653.0 64 69557.0 65 62461.0 66 52731.5 67 43002.0 68 36675.0 69 30348.0 70 25927.5 71 21507.0 72 18085.0 73 14663.0 74 11941.0 75 7455.5 76 5692.0 77 4181.0 78 2670.0 79 2096.0 80 1522.0 81 1089.5 82 657.0 83 436.5 84 216.0 85 165.0 86 114.0 87 90.0 88 66.0 89 48.5 90 31.0 91 22.5 92 14.0 93 9.5 94 5.0 95 4.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2745685.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.511898917891546 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44080288084405 21.06126535933085 2 6.613160155568444 3.5065486714451715 3 2.772872794548178 2.2054236972369825 4 1.6353896507066084 1.734291404435983 5 1.136654084874172 1.5067429101396284 6 0.813133334863822 1.2934625268406625 7 0.6297484700341536 1.1687079446869635 8 0.48156614779511464 1.0213786426098002 9 0.3996491245188775 0.95359114726815 >10 4.436158627172817 28.106040327749415 >50 1.3890250799892117 25.793129358439913 >100 0.2483561666999464 8.427639568186885 >500 0.002229428726119936 0.4072799619204241 >1k 0.001114714363059968 0.4890314862496666 >5k 0.0 0.0 >10k+ 1.39339295382496E-4 2.325466993459474 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62950 2.292688345531261 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.284156776906309E-5 0.0 0.0 0.05208172095488011 0.0 2 7.284156776906309E-5 0.0 0.0 0.13708783054137674 0.0 3 7.284156776906309E-5 0.0 0.0 0.21615735235469474 0.0 4 7.284156776906309E-5 0.0 0.0 0.3248369714661369 0.0 5 7.284156776906309E-5 0.0 0.0 0.5801830872805875 0.0 6 7.284156776906309E-5 0.0 0.0 1.0642517258898962 0.0 7 7.284156776906309E-5 0.0 0.0 1.3838076836927762 0.0 8 7.284156776906309E-5 0.0 0.0 1.8788753990352134 0.0 9 7.284156776906309E-5 0.0 0.0 2.1717349222507316 0.0 10 7.284156776906309E-5 0.0 0.0 2.5394755771328468 0.0 11 7.284156776906309E-5 0.0 0.0 2.8546610408695825 0.0 12 7.284156776906309E-5 0.0 0.0 3.079705064492103 0.0 13 7.284156776906309E-5 0.0 0.0 3.222073908696737 0.0 14 7.284156776906309E-5 0.0 0.0 3.310612834320033 0.0 15 7.284156776906309E-5 0.0 0.0 3.3889539404556603 0.0 16 7.284156776906309E-5 0.0 0.0 3.513695125260181 0.0 17 7.284156776906309E-5 0.0 0.0 3.6447371056767253 0.0 18 7.284156776906309E-5 0.0 0.0 3.8126004986005313 0.0 19 7.284156776906309E-5 0.0 0.0 3.9175287769718667 0.0 20 1.0926235165359464E-4 0.0 0.0 4.025042930999004 0.0 21 1.0926235165359464E-4 0.0 0.0 4.15513797103455 0.0 22 1.0926235165359464E-4 0.0 0.0 4.301112472843753 0.0 23 1.0926235165359464E-4 0.0 0.0 4.468757341064252 0.0 24 1.0926235165359464E-4 0.0 0.0 4.603150033598173 0.0 25 1.0926235165359464E-4 0.0 0.0 4.725196080395238 0.0 26 1.0926235165359464E-4 0.0 0.0 4.841123435499703 0.0 27 1.0926235165359464E-4 0.0 0.0 4.97154626259021 0.0 28 1.0926235165359464E-4 0.0 0.0 5.0988369022666475 0.0 29 1.0926235165359464E-4 0.0 0.0 5.2440829883981595 0.0 30 1.0926235165359464E-4 0.0 0.0 5.426623957227432 0.0 31 1.0926235165359464E-4 0.0 0.0 5.580392506787923 0.0 32 1.0926235165359464E-4 0.0 0.0 5.729572037578965 0.0 33 1.0926235165359464E-4 0.0 0.0 5.87998987502208 0.0 34 1.8210391942265775E-4 0.0 0.0 6.034851048099108 0.0 35 1.8210391942265775E-4 0.0 0.0 6.205445999814254 0.0 36 1.8210391942265775E-4 0.0 0.0 6.358959603887555 0.0 37 1.8210391942265775E-4 0.0 0.0 6.52802488267955 0.0 38 1.8210391942265775E-4 0.0 0.0 6.719488943560532 0.0 39 1.8210391942265775E-4 0.0 0.0 7.000074662606964 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCCG 50 2.1827873E-11 45.0 1 CGTTTTT 27525 0.0 43.32425 1 AATAGCG 90 0.0 40.0 1 TATAGCG 145 0.0 38.793102 1 CGTTAGG 425 0.0 38.647057 2 TACGGGA 800 0.0 38.25 4 TAATGCG 165 0.0 38.18182 1 GTTTTTT 32085 0.0 38.029457 2 AGTACGG 265 0.0 37.35849 2 AGGGCGA 2360 0.0 37.277542 6 TAAGGGA 2955 0.0 37.15736 4 GACCGAT 1860 0.0 37.137093 9 ACGTTAG 170 0.0 37.058826 1 GGGCGAT 4945 0.0 37.03741 7 TTACGGG 815 0.0 36.993862 3 ACGGGAT 980 0.0 36.964287 5 TACGGGT 295 0.0 36.61017 4 TTATACG 80 0.0 36.5625 1 AAGGGAT 3235 0.0 36.44513 5 GGCGATA 945 0.0 36.19048 8 >>END_MODULE