SRR1547306_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547306_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	970143
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9152	0.943366081082892	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCATC	20	7.032741E-4	45.000004	19
CCCCGTA	20	7.032741E-4	45.000004	35
TGTTACG	20	7.032741E-4	45.000004	1
CGTCGAC	20	7.032741E-4	45.000004	37
TAGCACG	25	3.890355E-5	45.0	1
TCGTACT	25	3.890355E-5	45.0	21
GACGCAC	25	3.890355E-5	45.0	9
GCGTAAG	45	3.8380676E-10	45.0	1
ACGGGAT	310	0.0	42.09677	5
CGGGTAT	75	0.0	42.000004	6
CGTTTTT	4215	0.0	41.530247	1
TATCGCG	60	3.6379788E-12	41.249996	1
TCGATAG	55	6.002665E-11	40.909092	1
TACGGGA	330	0.0	40.227272	4
TCGTTAG	45	1.927765E-8	40.0	1
TTACGAG	45	1.927765E-8	40.0	1
TAACGCC	40	3.4574805E-7	39.375004	12
AAATGCG	40	3.4574805E-7	39.375004	1
CGTTAGG	155	0.0	39.193546	2
GACCGAT	545	0.0	38.80734	9