##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547305_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 836024 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301161210682945 31.0 31.0 33.0 30.0 34.0 2 31.706820617589926 31.0 31.0 34.0 30.0 34.0 3 31.75344128876683 31.0 31.0 34.0 30.0 34.0 4 35.580520415681846 37.0 35.0 37.0 33.0 37.0 5 35.50178703003741 37.0 35.0 37.0 33.0 37.0 6 35.53701089920864 37.0 35.0 37.0 33.0 37.0 7 35.9015375156694 37.0 35.0 37.0 35.0 37.0 8 35.890799785652085 37.0 35.0 37.0 35.0 37.0 9 37.63835009521258 39.0 37.0 39.0 35.0 39.0 10 36.978754198444065 39.0 37.0 39.0 32.0 39.0 11 36.67581672296489 39.0 35.0 39.0 32.0 39.0 12 36.40765815335445 39.0 35.0 39.0 32.0 39.0 13 36.32679085767872 39.0 35.0 39.0 32.0 39.0 14 37.42752002334861 39.0 36.0 41.0 32.0 41.0 15 37.5260183918165 39.0 36.0 41.0 32.0 41.0 16 37.57692841353837 40.0 36.0 41.0 32.0 41.0 17 37.47917284671254 39.0 36.0 41.0 32.0 41.0 18 37.30408098332105 39.0 36.0 41.0 32.0 41.0 19 37.207708151919086 39.0 36.0 41.0 32.0 41.0 20 37.02597891926548 39.0 35.0 41.0 32.0 41.0 21 36.923901706171115 39.0 35.0 41.0 31.0 41.0 22 36.82902883170818 38.0 35.0 41.0 31.0 41.0 23 36.727182473230435 38.0 35.0 40.0 31.0 41.0 24 36.59970886003273 38.0 35.0 40.0 31.0 41.0 25 36.49216410055214 38.0 35.0 40.0 30.0 41.0 26 36.25553213783336 38.0 35.0 40.0 30.0 41.0 27 36.253519037730975 38.0 35.0 40.0 30.0 41.0 28 36.27516434934882 38.0 35.0 40.0 30.0 41.0 29 36.25128465211525 38.0 35.0 40.0 30.0 41.0 30 36.208061012602506 38.0 35.0 40.0 30.0 41.0 31 36.1282570835287 38.0 35.0 40.0 30.0 41.0 32 35.918137517583226 38.0 35.0 40.0 29.0 41.0 33 35.67839440016076 38.0 35.0 40.0 27.0 41.0 34 35.383294020267364 38.0 34.0 40.0 26.0 41.0 35 35.19630776149967 38.0 34.0 40.0 25.0 41.0 36 34.957714132608636 38.0 34.0 40.0 24.0 41.0 37 34.92705472570165 38.0 34.0 40.0 24.0 41.0 38 34.83357056735213 38.0 34.0 40.0 24.0 41.0 39 34.68869434370305 38.0 34.0 40.0 23.0 41.0 40 34.56433786589859 38.0 33.0 40.0 23.0 41.0 41 34.521736218099 38.0 33.0 40.0 23.0 41.0 42 34.42562414476139 37.0 33.0 40.0 23.0 41.0 43 34.310052103767354 37.0 33.0 40.0 23.0 41.0 44 34.20190927533181 37.0 33.0 40.0 22.0 41.0 45 34.062165679454175 37.0 33.0 40.0 22.0 41.0 46 33.98128642239936 37.0 33.0 40.0 22.0 41.0 47 33.932295005884995 37.0 33.0 40.0 22.0 41.0 48 33.79354898902424 36.0 33.0 40.0 22.0 41.0 49 33.66190803134838 36.0 33.0 40.0 21.0 41.0 50 33.53274307914605 36.0 32.0 40.0 20.0 41.0 51 33.06561534118638 35.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 4.0 13 5.0 14 11.0 15 30.0 16 90.0 17 212.0 18 485.0 19 801.0 20 1513.0 21 2285.0 22 3551.0 23 5144.0 24 7534.0 25 11002.0 26 15076.0 27 17954.0 28 18872.0 29 20421.0 30 22877.0 31 27079.0 32 32745.0 33 41581.0 34 60416.0 35 74314.0 36 73186.0 37 89485.0 38 124735.0 39 184554.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.41139010363339 22.660593475785383 27.493349473220864 17.434666947360363 2 34.191721768753055 24.554319014765127 28.35026267188502 12.903696544596807 3 28.138665875620795 24.956221352497057 33.488990746677125 13.416122025205018 4 24.8839746227381 27.753987923791662 33.00228223113212 14.359755222338114 5 22.477345147986185 32.018219572643844 31.892505478311627 13.611929801058341 6 21.924729433604778 40.353985053060676 28.29799144522167 9.423294068112877 7 87.4383988976393 2.5716965063203925 8.800584672210366 1.189319923829938 8 87.55825191621294 2.311656124704554 8.839817995655627 1.2902739634268874 9 82.65922987856807 4.975216022506531 10.089782111518328 2.27577198740706 10 38.178927877668585 35.96380008229429 15.626465268939649 10.23080677109748 11 28.48781853152541 24.97547917284671 29.417337301321496 17.119364994306384 12 27.43031300536827 22.992162904414226 31.270992220319034 18.30653186989847 13 23.957087356343838 24.823928499660298 32.34237294623121 18.876611197764657 14 21.243528893907353 26.656172550070334 32.342971015186166 19.757327540836148 15 20.381113460857584 25.393290144780533 35.236069777901115 18.989526616460772 16 23.903141536606604 24.95777633177995 33.116393787738154 18.022688343875295 17 23.950508597839296 24.693788695061386 30.732730160856626 20.62297254624269 18 23.740347167066975 24.882778484828187 32.15864616326804 19.2182281848368 19 25.14389539056295 26.154751538233352 29.515779451307615 19.18557361989608 20 26.282857908385402 26.130350324871053 29.796154177392037 17.7906375893515 21 25.89722304622834 25.56673014171842 30.652828148474203 17.883218663579036 22 24.92727481507708 23.96223074935648 30.678664727328403 20.43182970823804 23 23.14395280518263 26.210013109671493 30.452355434772205 20.193678650373673 24 22.279982392849966 25.71433355980211 32.828244165239276 19.17743988210865 25 23.049218682717243 26.96788608939456 30.11468570280279 19.868209525085405 26 22.14445996765643 28.015583284690393 29.50656918940126 20.333387558251918 27 21.171401777939387 27.474570108035174 30.837870683138284 20.51615743088715 28 20.597016353597507 27.481746935494677 31.819660679597717 20.101576031310106 29 21.43060486301829 25.985976479144142 31.662727385816673 20.9206912720209 30 21.657033769365473 26.57674899285188 32.111877170990304 19.654340066792344 31 23.840583523917974 26.937863027855656 29.770437212328833 19.451116235897533 32 24.225620317120082 26.547802455431903 29.338033357894034 19.888543869553985 33 23.632694755174494 27.45531228768552 29.002277446580482 19.909715510559504 34 21.53765920595581 27.737481220634812 29.93335119565945 20.79150837774992 35 22.24995933131106 28.3734677473374 29.086246327856617 20.290326593494925 36 23.155555342908816 29.163875678210193 27.424332315818685 20.256236663062303 37 22.57602652555429 29.075241859085388 27.78580519219544 20.562926423164885 38 22.49050266499526 29.03899888041492 27.753629082418684 20.716869372171136 39 22.44815938298422 28.80910117412897 27.608776781527805 21.133962661359003 40 23.270384582260796 27.704707041903102 28.208400715768928 20.816507660067174 41 21.30142196874731 27.79704888854865 28.746543161440343 22.154985981263696 42 22.207974890672997 27.874917466484217 27.695377166205752 22.221730476637035 43 21.700812416868416 27.42971493641331 28.655397452704705 22.214075194013567 44 21.58909313608222 27.80195305397931 28.631235466924394 21.97771834301408 45 21.279413031204847 28.624058639464895 28.00146885735338 22.09505947197688 46 21.85523382103863 28.977876233218186 28.037113767068888 21.129776178674298 47 21.577849439729 28.10062869008545 28.99653598461288 21.324985885572666 48 21.704998899553125 27.465240232337827 29.94052802311895 20.889232844990097 49 22.175200711941283 27.474211266662202 28.803718553534345 21.546869467862166 50 20.87428112111614 28.479325952365002 29.597236442972928 21.04915648354593 51 21.123795489124713 28.444518339186438 28.669990335205686 21.761695836483163 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 548.0 1 863.0 2 1178.0 3 8959.5 4 16741.0 5 11325.0 6 5909.0 7 5840.5 8 5772.0 9 6131.0 10 6490.0 11 6745.5 12 7001.0 13 6914.0 14 6827.0 15 6473.5 16 6120.0 17 5763.5 18 5407.0 19 5265.0 20 5123.0 21 5036.0 22 4949.0 23 5428.0 24 5907.0 25 6539.0 26 8026.0 27 8881.0 28 10750.0 29 12619.0 30 14609.5 31 16600.0 32 18787.5 33 20975.0 34 23265.0 35 25555.0 36 28154.5 37 30754.0 38 33333.5 39 35913.0 40 38919.5 41 41926.0 42 45282.0 43 48638.0 44 49442.5 45 50247.0 46 51105.0 47 51963.0 48 53597.5 49 55232.0 50 55054.5 51 54877.0 52 52692.5 53 50508.0 54 47925.5 55 45343.0 56 44294.0 57 43245.0 58 40661.5 59 38078.0 60 35234.0 61 32390.0 62 29237.5 63 26085.0 64 22786.5 65 19488.0 66 16804.0 67 14120.0 68 12110.5 69 10101.0 70 8200.0 71 6299.0 72 5366.5 73 4434.0 74 3611.5 75 2354.5 76 1920.0 77 1446.5 78 973.0 79 752.5 80 532.0 81 363.0 82 194.0 83 152.5 84 111.0 85 84.0 86 57.0 87 37.0 88 17.0 89 15.0 90 13.0 91 8.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 836024.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.718718088935077 #Duplication Level Percentage of deduplicated Percentage of total 1 70.84487113548035 22.471084955932348 2 6.629852059780046 4.205808169110177 3 3.519883402533498 3.349385680526449 4 2.5074236588258585 3.181290566552941 5 1.9976362071331046 3.1681229849152235 6 1.702979967660149 3.240980490318962 7 1.455505136998148 3.2316729982208763 8 1.2418309469223727 3.1511428575636833 9 1.1088095391723376 3.1653015468596455 >10 8.926312100225857 47.772989863332256 >50 0.051233565619235644 1.0233081524808083 >100 0.013282771880979545 0.6957674946038016 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.7950776802794176E-4 1.343144239582808 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11158 1.334650679884788 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023563916825354296 0.0 2 0.0 0.0 0.0 0.05837153000392333 0.0 3 0.0 0.0 0.0 0.10215017750686584 0.0 4 0.0 0.0 0.0 0.14580921121881668 0.0 5 0.0 0.0 0.0 0.24161985780312528 0.0 6 0.0 0.0 0.0 0.46685262624039503 0.0 7 0.0 0.0 0.0 0.5968728170483144 0.0 8 0.0 0.0 0.0 0.8167229648909601 0.0 9 0.0 0.0 0.0 0.9491354315187124 0.0 10 0.0 0.0 0.0 1.127120752514282 0.0 11 0.0 0.0 0.0 1.2942212185296116 0.0 12 0.0 0.0 0.0 1.4323751471249628 0.0 13 0.0 0.0 0.0 1.537156828033645 0.0 14 0.0 0.0 0.0 1.6164607714611063 0.0 15 0.0 0.0 0.0 1.679856080686679 0.0 16 0.0 0.0 0.0 1.7567677482943074 0.0 17 0.0 0.0 0.0 1.8359520779307772 0.0 18 0.0 0.0 0.0 1.934394227916902 0.0 19 0.0 0.0 0.0 2.0011387232902407 0.0 20 0.0 0.0 0.0 2.079724983971752 0.0 21 0.0 0.0 0.0 2.1678803479325954 0.0 22 0.0 0.0 0.0 2.2567533946393885 0.0 23 0.0 0.0 0.0 2.3551955446255133 0.0 24 0.0 0.0 0.0 2.445982411988173 0.0 25 0.0 0.0 0.0 2.523252920968776 0.0 26 0.0 0.0 0.0 2.6069825746629283 0.0 27 0.0 0.0 0.0 2.6994440350994706 0.0 28 0.0 0.0 0.0 2.789752447298164 0.0 29 0.0 0.0 0.0 2.889988804149163 0.0 30 0.0 0.0 0.0 3.009602595140809 0.0 31 0.0 0.0 0.0 3.116896165660316 0.0 32 0.0 0.0 0.0 3.2295723567744465 0.0 33 0.0 0.0 0.0 3.334952106638087 0.0 34 0.0 0.0 0.0 3.4502598011540337 0.0 35 0.0 0.0 0.0 3.575973895486254 0.0 36 0.0 0.0 0.0 3.6957073002688916 0.0 37 0.0 0.0 0.0 3.816636842961446 0.0 38 0.0 0.0 0.0 3.961010688688363 0.0 39 0.0 0.0 0.0 4.1596891955254875 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 30 2.1647884E-6 45.000004 1 CGATCGA 20 7.032183E-4 45.0 10 TAAGACG 25 3.88989E-5 45.0 1 GCGATCG 65 0.0 44.999996 9 CGTTTTT 5715 0.0 42.480312 1 ATACGAG 75 0.0 42.0 1 TACGGGA 345 0.0 41.73913 4 CGTTAGG 115 0.0 41.086956 2 TATACGG 55 6.002665E-11 40.909092 2 CGTCATA 55 6.002665E-11 40.909092 38 TAGGGAT 1350 0.0 39.833332 5 ACTAATC 370 0.0 39.527027 10 GTTAGCG 40 3.4567165E-7 39.375 1 TTACCGG 40 3.4567165E-7 39.375 2 GGGCGAT 1585 0.0 39.17981 7 GGCGATT 365 0.0 38.835617 8 CGGGATA 180 0.0 38.75 6 TATGGGA 970 0.0 38.737114 4 AGGGATC 955 0.0 38.638744 6 CGACCCG 70 0.0 38.571426 32 >>END_MODULE