##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547302_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2043531 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301406731779455 31.0 31.0 33.0 30.0 34.0 2 31.684695754554248 31.0 31.0 34.0 30.0 34.0 3 31.627340128434557 31.0 31.0 34.0 30.0 34.0 4 35.479373202559685 37.0 35.0 37.0 33.0 37.0 5 35.42553648562219 37.0 35.0 37.0 33.0 37.0 6 35.4889522106589 37.0 35.0 37.0 33.0 37.0 7 35.94878864083785 37.0 35.0 37.0 35.0 37.0 8 35.96669392341002 37.0 35.0 37.0 35.0 37.0 9 37.70820702010393 39.0 37.0 39.0 35.0 39.0 10 37.00340978433897 39.0 37.0 39.0 32.0 39.0 11 36.686805338406906 39.0 35.0 39.0 32.0 39.0 12 36.500925114422046 39.0 35.0 39.0 32.0 39.0 13 36.39857090496792 39.0 35.0 39.0 32.0 39.0 14 37.53170566044753 40.0 36.0 41.0 32.0 41.0 15 37.65536514983135 40.0 36.0 41.0 32.0 41.0 16 37.71901527307391 40.0 36.0 41.0 32.0 41.0 17 37.61574353410836 40.0 36.0 41.0 32.0 41.0 18 37.396405045971896 39.0 36.0 41.0 32.0 41.0 19 37.22378324576432 38.0 36.0 41.0 32.0 41.0 20 36.980428483835084 38.0 35.0 41.0 32.0 41.0 21 36.85884481321791 38.0 35.0 40.0 31.0 41.0 22 36.779296227950546 38.0 35.0 40.0 31.0 41.0 23 36.68412713093171 38.0 35.0 40.0 31.0 41.0 24 36.56332984427444 38.0 35.0 40.0 31.0 41.0 25 36.46630464622264 38.0 35.0 40.0 31.0 41.0 26 36.26829345872414 38.0 35.0 40.0 31.0 41.0 27 36.225806214831096 38.0 35.0 40.0 30.0 41.0 28 36.17869315415328 38.0 35.0 40.0 30.0 41.0 29 36.11254392519614 38.0 35.0 40.0 30.0 41.0 30 36.01587203717487 38.0 35.0 40.0 30.0 41.0 31 35.85355788583584 38.0 35.0 40.0 30.0 41.0 32 35.54430982451453 38.0 34.0 40.0 28.0 41.0 33 35.15919993384001 38.0 34.0 40.0 25.0 41.0 34 34.758498892358375 38.0 34.0 40.0 23.0 41.0 35 34.46108084487096 38.0 33.0 40.0 22.0 41.0 36 34.1820750455951 38.0 33.0 40.0 20.0 41.0 37 34.10249416328894 38.0 33.0 40.0 20.0 41.0 38 34.02122649472898 37.0 33.0 40.0 19.0 41.0 39 33.888122078891875 37.0 33.0 40.0 18.0 41.0 40 33.77992112671645 37.0 33.0 40.0 18.0 41.0 41 33.72934934679239 37.0 33.0 40.0 18.0 41.0 42 33.63899984879114 37.0 33.0 40.0 18.0 41.0 43 33.532984818923715 37.0 33.0 40.0 18.0 41.0 44 33.4396008673223 37.0 33.0 40.0 17.0 41.0 45 33.29428083058197 37.0 32.0 40.0 17.0 41.0 46 33.214120069624585 36.0 32.0 40.0 17.0 41.0 47 33.171463021603294 36.0 32.0 40.0 17.0 41.0 48 33.048637383039456 36.0 32.0 40.0 15.0 41.0 49 32.9178637368359 36.0 32.0 40.0 15.0 41.0 50 32.78746003853134 36.0 31.0 40.0 15.0 41.0 51 32.37846306221927 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 3.0 13 4.0 14 21.0 15 78.0 16 196.0 17 458.0 18 1141.0 19 2174.0 20 3849.0 21 6270.0 22 9939.0 23 15074.0 24 22775.0 25 34646.0 26 48948.0 27 54517.0 28 53480.0 29 52616.0 30 57228.0 31 65668.0 32 78705.0 33 98412.0 34 142090.0 35 191378.0 36 182722.0 37 206606.0 38 280411.0 39 434010.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.592455411735862 22.49615983315154 27.50371782958027 20.407666925532325 2 36.397881901473475 23.874215756942274 27.45943173849577 12.268470603088478 3 25.957472629482986 23.843973984245896 38.004121297890755 12.194432088380356 4 22.398534693136536 26.49888844358123 37.824628058003526 13.277948805278704 5 20.619701878757894 30.672057336052156 35.93094501624884 12.777295768941114 6 19.93055157959434 38.25701689869153 32.588299370060945 9.224132151653192 7 83.56555393581012 2.2606459114150947 13.15106059071284 1.0227395620619408 8 84.1360860197374 1.8364781351494057 12.880254813849165 1.147181031264023 9 79.42683521806129 5.019889593062205 13.956529164470712 1.5967460244057956 10 33.130253468139216 38.11275679204279 19.628280657352395 9.128709082465596 11 22.867428974652206 25.43778391421515 35.983060692497446 15.711726418635196 12 23.64270471062098 23.71821127254737 35.71015071462092 16.928933302210734 13 19.658424560234224 27.628403973318733 36.74116027601245 15.972011190434596 14 17.003020751826128 30.0573859657622 36.246917712527974 16.692675569883697 15 15.761150674983643 27.98352459541842 40.7198129120625 15.535511817535433 16 18.899248408759153 26.356928277574454 39.814957541627706 14.92886577203869 17 18.88725935647661 25.815952877641692 35.85338318821687 19.443404577664836 18 18.993692779801236 27.16415850799425 36.8972626302219 16.944886081982606 19 20.981722322783455 28.53076366348247 33.7295592775446 16.75795473618947 20 22.195601632664246 28.567807388290174 33.6178408842342 15.618750094811382 21 20.385988761609195 28.480409643895786 35.518179073378384 15.615422521116637 22 20.211242207727704 26.264979586803427 34.82036729562703 18.70341090984184 23 17.530441182443525 29.486364532762167 34.94329178270357 18.039902502090744 24 17.232133987690915 28.90951984579632 37.844397760542904 16.013948405969863 25 17.78475589555529 29.747187588541596 35.639195099071166 16.828861416831945 26 17.372723976293976 31.980429951882307 33.28674730160688 17.360098770216844 27 16.706524148642718 31.334684915472288 34.66113310735193 17.297657828533065 28 15.963936930734107 30.658600236551344 36.851508491919134 16.52595434079542 29 17.193866890201324 28.024580982622727 37.056447883589726 17.725104243586223 30 18.50375648815702 29.783056875574683 35.26675151979588 16.44643511647242 31 19.939310927996686 29.879458642907792 33.2794560004228 16.901774428672724 32 20.763130091982944 29.60444446401841 33.121053705571384 16.51137173842726 33 20.198714871465125 30.400077121413865 31.936926819314216 17.46428118780679 34 18.083503504473384 31.16287445602734 32.71567693369956 18.037945105799714 35 17.875334408922594 31.06608120943602 32.56730629483967 18.491278086801717 36 20.02661080257652 31.340948583603577 30.475632618247534 18.15680799557237 37 18.113109123375175 32.86306887441394 31.493527624489182 17.5302943777217 38 18.068774097383404 33.25136736364655 30.34238286573583 18.33747567323422 39 18.436128446302014 32.74909947536886 30.320704701812694 18.494067376516433 40 20.067422515244445 31.601918444104836 30.097023240655513 18.233635799995206 41 17.491440061344797 31.38249431988064 30.69520354719356 20.430862071581004 42 18.8282927932094 31.907516940041525 29.523506127384415 19.74068413936466 43 18.4581002196688 31.655306427942616 30.319236654594423 19.56735669779416 44 18.664458723650387 32.15434461234011 30.292811804665554 18.888384859343947 45 17.939488072361026 33.26820097174939 29.158207044571384 19.634103911318203 46 19.37078517526771 32.9235524198067 28.84786186262895 18.857800542296644 47 18.449389806173727 32.11509881670501 30.487230191271873 18.948281185849396 48 18.691715467002947 32.03142012526358 30.595131661814772 18.681732745918705 49 18.851781548701734 30.85350797223042 31.021501508907868 19.273208970159985 50 17.71096205538355 32.6260281835705 31.076797954129397 18.58621180691656 51 17.630855612173242 32.87902165418582 29.898102842579828 19.59201989106111 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1735.0 1 2131.5 2 2528.0 3 35994.5 4 69461.0 5 45704.0 6 21947.0 7 22652.5 8 23358.0 9 25988.0 10 28618.0 11 31050.0 12 33482.0 13 34422.5 14 35363.0 15 33643.0 16 31923.0 17 29981.0 18 28039.0 19 25803.5 20 23568.0 21 22879.0 22 22190.0 23 22986.0 24 23782.0 25 24515.5 26 29880.0 27 34511.0 28 39162.0 29 43813.0 30 47979.0 31 52145.0 32 59119.5 33 66094.0 34 72619.0 35 79144.0 36 83483.5 37 87823.0 38 96688.5 39 105554.0 40 116701.0 41 127848.0 42 131252.0 43 134656.0 44 135876.5 45 137097.0 46 137609.0 47 138121.0 48 139616.0 49 141111.0 50 132541.5 51 123972.0 52 116187.0 53 108402.0 54 96643.0 55 84884.0 56 73400.0 57 61916.0 58 55305.0 59 48694.0 60 41667.0 61 34640.0 62 28540.0 63 22440.0 64 18397.0 65 14354.0 66 11666.5 67 8979.0 68 7280.0 69 5581.0 70 4401.0 71 3221.0 72 3047.5 73 2874.0 74 2351.0 75 1598.5 76 1369.0 77 1070.0 78 771.0 79 494.0 80 217.0 81 176.5 82 136.0 83 89.5 84 43.0 85 33.5 86 24.0 87 19.0 88 14.0 89 10.5 90 7.0 91 5.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2043531.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.390818196912853 #Duplication Level Percentage of deduplicated Percentage of total 1 77.34079636599685 21.184276924654778 2 7.372057026008822 4.038533474733634 3 3.2379587558239136 2.6607101882962487 4 2.0073599164597336 2.19932922110075 5 1.3248634367029883 1.8144546765234355 6 0.9122658776744428 1.4992625281576681 7 0.6572443840219042 1.2601723003580168 8 0.520517423622169 1.1405918495008245 9 0.437047599745483 1.0773982213223094 >10 4.800162383144859 30.408643853744373 >50 1.192130028061209 22.59647863073167 >100 0.19470163282275105 6.973035494127235 >500 0.00199042931648052 0.3694438728495597 >1k 7.23792478720189E-4 0.2508392058615001 >5k 0.0 0.0 >10k+ 1.8094811968004726E-4 2.526829558038134 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50982 2.494799442729276 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.8934907275690946E-5 0.0 0.0 0.03738626915862788 0.0 2 4.8934907275690946E-5 0.0 0.0 0.11005460646302895 0.0 3 4.8934907275690946E-5 0.0 0.0 0.18017832858909408 0.0 4 4.8934907275690946E-5 0.0 0.0 0.26855477112899195 0.0 5 4.8934907275690946E-5 0.0 0.0 0.4821067064801072 0.0 6 4.8934907275690946E-5 0.0 0.0 0.8956556078669714 0.0 7 4.8934907275690946E-5 0.0 0.0 1.168859195187154 0.0 8 4.8934907275690946E-5 0.0 0.0 1.5924886874728106 0.0 9 4.8934907275690946E-5 0.0 0.0 1.803789617089244 0.0 10 4.8934907275690946E-5 0.0 0.0 2.0446961656074705 0.0 11 4.8934907275690946E-5 0.0 0.0 2.2717541353666766 0.0 12 4.8934907275690946E-5 0.0 0.0 2.456630215054237 0.0 13 4.8934907275690946E-5 0.0 0.0 2.5774015662106424 0.0 14 4.8934907275690946E-5 0.0 0.0 2.6450296080656472 0.0 15 4.8934907275690946E-5 0.0 0.0 2.7055131534584014 0.0 16 4.8934907275690946E-5 0.0 0.0 2.804312731248021 0.0 17 4.8934907275690946E-5 0.0 0.0 2.9307605316484064 0.0 18 4.8934907275690946E-5 0.0 0.0 3.092049986029084 0.0 19 4.8934907275690946E-5 0.0 0.0 3.192219741222423 0.0 20 4.8934907275690946E-5 0.0 0.0 3.289159792535567 0.0 21 4.8934907275690946E-5 0.0 0.0 3.4194734506107323 0.0 22 4.8934907275690946E-5 0.0 0.0 3.5660334979014263 0.0 23 4.8934907275690946E-5 0.0 0.0 3.7240443134946326 0.0 24 4.8934907275690946E-5 0.0 0.0 3.851911226206013 0.0 25 4.8934907275690946E-5 0.0 0.0 3.9718017490314557 0.0 26 4.8934907275690946E-5 0.0 0.0 4.080339373368939 0.0 27 4.8934907275690946E-5 0.0 0.0 4.196412973426877 0.0 28 4.8934907275690946E-5 0.0 0.0 4.326384087151112 0.0 29 4.8934907275690946E-5 0.0 0.0 4.466044312515934 0.0 30 4.8934907275690946E-5 0.0 0.0 4.634869742617068 0.0 31 4.8934907275690946E-5 0.0 0.0 4.787448783502673 0.0 32 4.8934907275690946E-5 0.0 0.0 4.938608712077282 0.0 33 4.8934907275690946E-5 0.0 0.0 5.086587871678971 0.0 34 4.8934907275690946E-5 0.0 0.0 5.246702888285032 0.0 35 4.8934907275690946E-5 0.0 0.0 5.416898495789885 0.0 36 4.8934907275690946E-5 0.0 0.0 5.579704932296109 0.0 37 4.8934907275690946E-5 0.0 0.0 5.7479920784172105 0.0 38 4.8934907275690946E-5 0.0 0.0 5.924010939887871 0.0 39 4.8934907275690946E-5 0.0 0.0 6.138296898848121 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 20 7.034575E-4 45.000004 1 CCGCCTA 20 7.034575E-4 45.000004 20 TAATGCG 30 2.1663345E-6 45.000004 1 CGTTTTT 23080 0.0 44.142113 1 GCGATAC 75 0.0 42.0 9 CGTAAGG 340 0.0 41.691177 2 AGTCGAG 60 3.6379788E-12 41.250004 1 AGGGCGA 1795 0.0 41.11421 6 AGTCGGC 55 6.184564E-11 40.90909 30 GCGAGAC 520 0.0 40.673077 21 CGACGGT 95 0.0 40.263157 28 ACGTAAG 140 0.0 40.17857 1 GTACGAG 140 0.0 40.17857 1 CGCTATA 45 1.929584E-8 40.0 11 CGAGGGA 1430 0.0 39.493004 4 TACGGGA 1100 0.0 39.477272 4 ACGTACT 120 0.0 39.375004 20 GGGCGAT 3530 0.0 39.19972 7 AAGGGCG 710 0.0 38.978874 5 TGTTACG 110 0.0 38.863632 1 >>END_MODULE