##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547301_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1378390 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.248374552920435 31.0 31.0 33.0 30.0 34.0 2 31.64376772901719 31.0 31.0 34.0 30.0 34.0 3 31.663313721080392 31.0 31.0 34.0 30.0 34.0 4 35.48548306357417 37.0 35.0 37.0 33.0 37.0 5 35.401237675839205 37.0 35.0 37.0 33.0 37.0 6 35.44278614905796 37.0 35.0 37.0 33.0 37.0 7 35.87291840480561 37.0 35.0 37.0 35.0 37.0 8 35.87121787012384 37.0 35.0 37.0 35.0 37.0 9 37.59382467951741 39.0 37.0 39.0 35.0 39.0 10 36.90505299661199 39.0 37.0 39.0 32.0 39.0 11 36.59362879881601 39.0 35.0 39.0 32.0 39.0 12 36.19492161144524 38.0 35.0 39.0 32.0 39.0 13 36.01019014937717 38.0 35.0 39.0 31.0 39.0 14 37.09501592437554 39.0 35.0 41.0 31.0 41.0 15 37.26635640130878 39.0 35.0 41.0 32.0 41.0 16 37.36455067143552 39.0 35.0 41.0 32.0 41.0 17 37.27095742133939 39.0 35.0 41.0 32.0 41.0 18 37.09264721885678 39.0 35.0 41.0 32.0 41.0 19 36.98662062261044 38.0 35.0 41.0 31.0 41.0 20 36.794980375655655 38.0 35.0 40.0 31.0 41.0 21 36.642879736504185 38.0 35.0 40.0 31.0 41.0 22 36.53446847408934 38.0 35.0 40.0 31.0 41.0 23 36.43541813274908 38.0 35.0 40.0 31.0 41.0 24 36.29987521673837 38.0 35.0 40.0 30.0 41.0 25 36.1184410798105 38.0 35.0 40.0 30.0 41.0 26 35.88040322405125 38.0 35.0 40.0 30.0 41.0 27 35.81396701949376 37.0 34.0 40.0 30.0 41.0 28 35.78367878466907 37.0 34.0 40.0 30.0 41.0 29 35.7538374480372 37.0 34.0 40.0 30.0 41.0 30 35.675421324879025 37.0 34.0 40.0 29.0 41.0 31 35.539807311428554 37.0 34.0 40.0 29.0 41.0 32 35.31101502477528 37.0 34.0 40.0 27.0 41.0 33 35.05831948867882 37.0 34.0 40.0 26.0 41.0 34 34.779088646899645 37.0 34.0 40.0 24.0 41.0 35 34.589048817823695 37.0 33.0 40.0 24.0 41.0 36 34.320140889008194 37.0 33.0 40.0 23.0 41.0 37 34.24906158634349 36.0 33.0 40.0 23.0 41.0 38 34.155337023629016 36.0 33.0 40.0 23.0 41.0 39 34.019030898366935 36.0 33.0 40.0 22.0 41.0 40 33.88434768099014 36.0 33.0 40.0 22.0 41.0 41 33.83968543010324 36.0 33.0 40.0 22.0 41.0 42 33.73352099188183 36.0 33.0 40.0 21.0 41.0 43 33.601610574655936 35.0 33.0 40.0 21.0 41.0 44 33.49377824853634 35.0 33.0 40.0 21.0 41.0 45 33.32840850557535 35.0 32.0 40.0 20.0 41.0 46 33.24207299820805 35.0 32.0 40.0 20.0 41.0 47 33.17952103541088 35.0 32.0 39.0 20.0 41.0 48 33.03847749911128 35.0 32.0 39.0 20.0 41.0 49 32.894241107378896 35.0 32.0 39.0 20.0 41.0 50 32.765060686743226 35.0 31.0 39.0 20.0 41.0 51 32.332142572131254 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 0.0 9 1.0 10 0.0 11 2.0 12 6.0 13 8.0 14 32.0 15 55.0 16 176.0 17 419.0 18 930.0 19 1745.0 20 2992.0 21 4713.0 22 6987.0 23 10392.0 24 14617.0 25 20608.0 26 27324.0 27 31721.0 28 33841.0 29 37204.0 30 41830.0 31 48856.0 32 58721.0 33 73148.0 34 110569.0 35 147994.0 36 134992.0 37 140215.0 38 177934.0 39 250277.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.02780054991693 23.63293407526172 26.26847263836795 18.0707927364534 2 34.23646428079136 24.77049311152867 28.077612286798363 12.915430320881608 3 27.732426961890322 24.989734400278586 33.97021162370592 13.307627014125176 4 24.397957036832825 27.884923715349068 33.75713694962964 13.959982298188468 5 21.712940459521615 31.85840001741162 32.68537931935084 13.74328020371593 6 21.312835989814204 40.61492030557389 28.731636184243936 9.340607520367966 7 85.52340048897626 3.1374284491326834 9.840828793012138 1.4983422688789094 8 85.63860736076147 2.81589390520825 9.747168798380718 1.7983299356495623 9 80.52430734407532 5.327809981209962 11.409107727130928 2.7387749475837753 10 41.83503943005971 29.361936752297975 17.267464215497792 11.53555960214453 11 32.33932341354769 25.485167477999692 26.15827160672959 16.017237501723024 12 29.796211522138144 22.868418952546087 29.26820420925863 18.06716531605714 13 22.67398921930658 28.743534123143665 30.42941402650919 18.153062631040562 14 18.807521818933683 31.611880527281826 31.094465281959387 18.4861323718251 15 18.424683870312467 27.43918629705671 36.95187864102322 17.1842511916076 16 21.2831636909728 25.101241303259602 36.00802385391653 17.607571151851072 17 20.955535080782653 26.04400786424742 29.485196497362864 23.51526055760706 18 21.860141179201822 27.887317812810597 31.31392421593308 18.9386167920545 19 25.020422376830943 28.995784937499547 27.58065569251083 18.403136993158686 20 26.43090852371245 28.181356510131383 27.21863913696414 18.169095829192027 21 24.31800869129927 28.862658608956828 29.124413264750903 17.694919434992997 22 23.474053061905558 27.189619773794067 28.276612569737157 21.05971459456322 23 21.52380676006065 29.836403340128705 28.015801043246107 20.623988856564544 24 21.719252171011107 28.046126277758837 31.787810416500413 18.44681113472965 25 21.497761881615506 28.915038559478813 30.188408215381713 19.398791343523968 26 20.10555793353115 31.65345076502296 28.275234149986577 19.96575715145931 27 20.145241912666226 31.52119501737534 29.07319408875572 19.260368981202706 28 19.319060643214183 30.945813594120676 31.35883168043877 18.376294082226366 29 20.200306154281446 28.780969101633065 31.279608818984467 19.73911592510102 30 21.376388395156667 30.332489353521137 29.766539223296746 18.52458302802545 31 23.479494192499946 30.214888384274406 27.285891511110787 19.01972591211486 32 24.65934895058728 29.80462713745747 27.009699722139597 18.526324189815654 33 23.724562714471233 30.33394032167964 26.87417929613535 19.06731766771378 34 20.523509311588157 31.535632150552455 27.82093601955905 20.11992251830034 35 21.274530430429706 30.528660248550842 28.2741459238677 19.922663397151748 36 23.683935606033128 31.051444076059752 26.07012529110049 19.19449502680664 37 21.358323841583296 32.36188596841242 26.92075537402332 19.359034815980962 38 20.870508346694333 32.917751869935216 25.768396462539627 20.443343320830827 39 20.740501599692397 32.26336523045002 26.268907928815505 20.727225241042085 40 22.674134316122434 30.345185324908048 26.761293973403756 20.21938638556577 41 20.05883675882733 29.685357554828464 27.622080833436108 22.633724852908102 42 21.37471978177439 30.458215744455487 26.331734850078714 21.835329623691408 43 21.163894108343793 30.331763869441886 26.911977016664366 21.592365005549954 44 20.620724178207908 31.384586365252215 27.057509122962298 20.93718033357758 45 19.811446687802437 33.13779119117231 25.85509181001023 21.195670311015025 46 21.435007508760222 32.19059917730105 26.39775390129064 19.97663941264809 47 21.014154194386204 30.49993107901247 27.683964625396296 20.80195010120503 48 21.713593395192945 29.73084540659755 28.4368720028439 20.118689195365608 49 20.749860344314744 30.227729452477163 27.789304913703667 21.233105289504422 50 19.90242239134062 31.886693896502443 27.93977031174051 20.271113400416425 51 19.784676325278042 32.70257329202911 26.419953714115746 21.092796668577108 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1468.0 1 1954.5 2 2441.0 3 19559.5 4 36678.0 5 23002.5 6 9327.0 7 10499.5 8 11672.0 9 14465.0 10 17258.0 11 19893.5 12 22529.0 13 22541.5 14 22554.0 15 21137.5 16 19721.0 17 17724.5 18 15728.0 19 13919.0 20 12110.0 21 11507.5 22 10905.0 23 10539.5 24 10174.0 25 11037.0 26 12922.5 27 13945.0 28 16592.0 29 19239.0 30 20318.0 31 21397.0 32 23935.5 33 26474.0 34 30026.5 35 33579.0 36 36800.5 37 40022.0 38 42345.5 39 44669.0 40 54434.0 41 64199.0 42 71261.5 43 78324.0 44 84023.5 45 89723.0 46 91982.0 47 94241.0 48 93690.0 49 93139.0 50 90324.0 51 87509.0 52 80809.0 53 74109.0 54 71040.5 55 67972.0 56 64524.0 57 61076.0 58 59260.5 59 57445.0 60 54652.0 61 51859.0 62 47435.5 63 43012.0 64 38453.5 65 33895.0 66 29956.0 67 26017.0 68 22092.0 69 18167.0 70 15102.0 71 12037.0 72 10717.0 73 9397.0 74 7252.0 75 4077.0 76 3047.0 77 2630.5 78 2214.0 79 1669.0 80 1124.0 81 825.5 82 527.0 83 383.5 84 240.0 85 175.0 86 110.0 87 72.0 88 34.0 89 35.0 90 36.0 91 24.0 92 12.0 93 14.0 94 16.0 95 13.5 96 11.0 97 6.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1378390.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.293680816111387 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43548589415641 20.623576307575554 2 6.889871461070755 3.623201621228589 3 2.9973238139551612 2.364320269999999 4 1.7614488892608704 1.8525989947247703 5 1.1531979772691963 1.5160909766050759 6 0.7847429147781332 1.238026783432868 7 0.5741224165645729 1.0567054099366393 8 0.4347730727943644 0.9145427522795981 9 0.39070180793849424 0.9245689768991178 >10 4.978967413569438 32.2126975937172 >50 1.4426792108659345 25.940298883708945 >100 0.15418483318530443 5.13473832131833 >500 0.0019446735711026325 0.39941885699729623 >1k 2.778105101575189E-4 0.0798399434341706 >5k 0.0 0.0 >10k+ 2.778105101575189E-4 2.119374308141835 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29014 2.104919507541407 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.254840792518808E-5 0.0 0.0 0.06398769579001588 0.0 2 7.254840792518808E-5 0.0 0.0 0.18238669752392284 0.0 3 7.254840792518808E-5 0.0 0.0 0.29962492473102675 0.0 4 7.254840792518808E-5 0.0 0.0 0.41911215258381157 0.0 5 7.254840792518808E-5 0.0 0.0 0.6887745848417356 0.0 6 7.254840792518808E-5 0.0 0.0 1.1948722785278476 0.0 7 7.254840792518808E-5 0.0 0.0 1.5056696580793534 0.0 8 7.254840792518808E-5 0.0 0.0 2.0013203810242386 0.0 9 7.254840792518808E-5 0.0 0.0 2.271490652137639 0.0 10 7.254840792518808E-5 0.0 0.0 2.5981761330247606 0.0 11 7.254840792518808E-5 0.0 0.0 2.9135440622755535 0.0 12 7.254840792518808E-5 0.0 0.0 3.16296548872235 0.0 13 7.254840792518808E-5 0.0 0.0 3.322644534565689 0.0 14 7.254840792518808E-5 0.0 0.0 3.414128076959351 0.0 15 7.254840792518808E-5 0.0 0.0 3.4973411008495416 0.0 16 7.254840792518808E-5 0.0 0.0 3.62205181407294 0.0 17 7.254840792518808E-5 0.0 0.0 3.7563389171424633 0.0 18 7.254840792518808E-5 0.0 0.0 3.9267551273587302 0.0 19 7.254840792518808E-5 0.0 0.0 4.024477832833958 0.0 20 7.254840792518808E-5 0.0 0.0 4.134896509696095 0.0 21 7.254840792518808E-5 0.0 0.0 4.2614209331176225 0.0 22 7.254840792518808E-5 0.0 0.0 4.405719716480822 0.0 23 7.254840792518808E-5 0.0 0.0 4.554008662279906 0.0 24 7.254840792518808E-5 0.0 0.0 4.676397826449699 0.0 25 7.254840792518808E-5 0.0 0.0 4.781738114757071 0.0 26 7.254840792518808E-5 0.0 0.0 4.88337843426026 0.0 27 7.254840792518808E-5 0.0 0.0 4.987630496448755 0.0 28 7.254840792518808E-5 0.0 0.0 5.085353201923984 0.0 29 7.254840792518808E-5 0.0 0.0 5.203824752065816 0.0 30 7.254840792518808E-5 0.0 0.0 5.355813666669085 0.0 31 7.254840792518808E-5 0.0 0.0 5.470004860743331 0.0 32 7.254840792518808E-5 0.0 0.0 5.586590152279109 0.0 33 7.254840792518808E-5 0.0 0.0 5.704844057197165 0.0 34 7.254840792518808E-5 0.0 0.0 5.827523414998658 0.0 35 7.254840792518808E-5 0.0 0.0 5.961592872844405 0.0 36 1.4509681585037616E-4 0.0 0.0 6.087609457410458 0.0 37 1.4509681585037616E-4 0.0 0.0 6.221606366848279 0.0 38 1.4509681585037616E-4 0.0 0.0 6.36046401961709 0.0 39 1.4509681585037616E-4 0.0 0.0 6.530590036201655 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 20 7.0337765E-4 45.0 1 CCGTCGA 20 7.0337765E-4 45.0 36 ATCGTAC 20 7.0337765E-4 45.0 36 GTATCGC 25 3.8912112E-5 45.0 41 TCGTACT 20 7.0337765E-4 45.0 37 TATACGC 20 7.0337765E-4 45.0 33 TCGGTAT 20 7.0337765E-4 45.0 37 CCCGTAA 30 2.165818E-6 44.999996 20 CGCGTAG 30 2.165818E-6 44.999996 1 CGTTTTT 9580 0.0 43.121086 1 TACGGGT 60 3.6379788E-12 41.249996 4 CACGACG 105 0.0 40.714283 26 AATCGGT 50 1.0822987E-9 40.5 26 CGAATAT 45 1.9288564E-8 40.0 14 TACCGGG 175 0.0 39.857143 3 ACGGGTA 125 0.0 39.600002 5 TTACGGG 285 0.0 39.473686 3 TAATGCG 80 0.0 39.375 1 CGAGGGT 265 0.0 39.056602 4 ATAGGGA 1435 0.0 38.72822 4 >>END_MODULE