##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547300_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1449957 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.309373312449956 31.0 31.0 33.0 30.0 34.0 2 31.70016972917128 31.0 31.0 34.0 30.0 34.0 3 31.688808702602905 31.0 31.0 34.0 30.0 34.0 4 35.527521850647986 37.0 35.0 37.0 33.0 37.0 5 35.45943983166397 37.0 35.0 37.0 33.0 37.0 6 35.50126383058256 37.0 35.0 37.0 33.0 37.0 7 35.91958520149218 37.0 35.0 37.0 35.0 37.0 8 35.92587918124469 37.0 35.0 37.0 35.0 37.0 9 37.65761881214409 39.0 37.0 39.0 35.0 39.0 10 36.960487793775954 39.0 37.0 39.0 32.0 39.0 11 36.68051328418705 39.0 35.0 39.0 32.0 39.0 12 36.37140204847454 38.0 35.0 39.0 32.0 39.0 13 36.265446492551156 39.0 35.0 39.0 32.0 39.0 14 37.38792115904127 39.0 36.0 41.0 32.0 41.0 15 37.49582987633426 39.0 36.0 41.0 32.0 41.0 16 37.57519154016291 40.0 36.0 41.0 32.0 41.0 17 37.48700754574101 39.0 36.0 41.0 32.0 41.0 18 37.25735383876901 39.0 36.0 41.0 32.0 41.0 19 37.11282472514702 38.0 35.0 41.0 32.0 41.0 20 36.902035715541906 38.0 35.0 41.0 32.0 41.0 21 36.78745645560524 38.0 35.0 40.0 31.0 41.0 22 36.67868150572741 38.0 35.0 40.0 31.0 41.0 23 36.57258732500343 38.0 35.0 40.0 31.0 41.0 24 36.42456845271963 38.0 35.0 40.0 31.0 41.0 25 36.283958075998115 38.0 35.0 40.0 30.0 41.0 26 36.05292087972264 38.0 35.0 40.0 30.0 41.0 27 36.00448358123724 38.0 35.0 40.0 30.0 41.0 28 35.96368375062157 38.0 35.0 40.0 30.0 41.0 29 35.92282667692904 38.0 35.0 40.0 30.0 41.0 30 35.8407414840578 38.0 35.0 40.0 30.0 41.0 31 35.72157519154016 38.0 35.0 40.0 29.0 41.0 32 35.45392035763819 38.0 34.0 40.0 27.0 41.0 33 35.15853573588734 38.0 34.0 40.0 26.0 41.0 34 34.83374541451919 37.0 34.0 40.0 24.0 41.0 35 34.58754845833359 37.0 33.0 40.0 23.0 41.0 36 34.328849062420474 37.0 33.0 40.0 22.0 41.0 37 34.27139563449123 37.0 33.0 40.0 22.0 41.0 38 34.174215511218605 37.0 33.0 40.0 22.0 41.0 39 34.025625587517425 37.0 33.0 40.0 21.0 41.0 40 33.905528232906214 37.0 33.0 40.0 21.0 41.0 41 33.84890655378056 36.0 33.0 40.0 21.0 41.0 42 33.743482048088325 36.0 33.0 40.0 20.0 41.0 43 33.613964414117106 36.0 33.0 40.0 20.0 41.0 44 33.50627570334844 36.0 33.0 40.0 19.0 41.0 45 33.357204386061106 35.0 33.0 40.0 20.0 41.0 46 33.267527243911374 35.0 32.0 40.0 20.0 41.0 47 33.214816715254315 35.0 32.0 40.0 20.0 41.0 48 33.06424466380727 35.0 32.0 40.0 18.0 41.0 49 32.92666058372765 35.0 32.0 39.0 18.0 41.0 50 32.80324106163148 35.0 31.0 39.0 18.0 41.0 51 32.36724744251036 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 2.0 12 1.0 13 8.0 14 20.0 15 68.0 16 176.0 17 427.0 18 857.0 19 1699.0 20 2965.0 21 4700.0 22 7171.0 23 10450.0 24 15416.0 25 22967.0 26 30655.0 27 35021.0 28 35721.0 29 37594.0 30 42019.0 31 48827.0 32 58923.0 33 73614.0 34 108291.0 35 144248.0 36 139012.0 37 150364.0 38 195773.0 39 282888.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.924434310810593 22.740260573244587 26.75396580726187 19.581339308682946 2 36.099691232222746 24.01857434392882 26.703274648834412 13.178459775014018 3 27.395777943759715 24.165682154712172 35.53801940333403 12.900520498194085 4 23.65663257600053 27.281084887344935 35.173387900468775 13.888894636185764 5 21.840578720610335 30.599390188812496 33.656446363581814 13.903584726995351 6 20.57454117604867 39.612140222089344 30.31779563118079 9.4955229706812 7 83.75427685096868 3.0013993518428475 11.665863194563702 1.5784606026247674 8 84.14566776807864 2.5402132614967203 11.54165261452581 1.77246635589883 9 79.0455854897766 5.0514601467491795 13.275773005682238 2.6271813577919896 10 38.92005073253896 28.927478539018743 20.094113135768854 12.058357592673438 11 29.452390657102246 25.599517778803094 28.44967126611341 16.49842029798125 12 26.662652754529965 22.624533003392514 32.38923637045788 18.32357787161964 13 22.18679588429174 26.565477458986713 33.331747079396145 17.9159795773254 14 19.43954200021104 28.577675062088048 33.61658311246472 18.366199825236194 15 18.38447622929508 26.172086482564655 37.88974431655559 17.553692971584674 16 21.014347322024033 25.115227555024045 36.367009504419784 17.503415618532138 17 21.30442488984156 25.888767735870786 31.647904041292257 21.158903332995393 18 21.6908501424525 26.319815001410383 33.57775437478491 18.411580481352203 19 24.068713761856387 28.11724761492927 29.714122556737887 18.099916066476453 20 25.381373378658818 27.625164056589263 29.467218683036805 17.52624388171511 21 23.998780653495242 28.002278688264546 30.49276633720862 17.50617432103159 22 23.30048408332109 26.10946393582706 30.374142129732125 20.215909851119722 23 21.36670259876672 28.585330461524034 30.154687345900605 19.893279593808643 24 21.35642643195626 26.859348242740992 33.71541362950764 18.068811695795116 25 20.935655333227125 28.36215142931825 31.308445698734516 19.393747538720113 26 20.240669206052317 30.440350989719008 30.020062663927277 19.298917140301402 27 19.863278704127087 29.77164150385149 31.011609309793325 19.353470482228094 28 19.535131041817102 29.398733893487876 32.733453474827186 18.33268158986784 29 19.92493570498987 27.847101672670295 32.61186366216378 19.61609896017606 30 20.39253577864723 28.708023755187224 31.862944901124653 19.036495565040894 31 22.988405863070422 28.688367999878615 29.29797228469534 19.025253852355622 32 23.211722830401175 29.357284388433584 29.289627209634496 18.14136557153074 33 22.806193562981523 29.190589789904113 29.155761170848514 18.847455476265846 34 20.33529270178357 30.05309812635823 30.397866971227423 19.213742200630776 35 20.699234529023965 29.892058867952638 30.126548580406176 19.28215802261722 36 22.200451461664038 30.355727790548272 27.93951820640198 19.50430254138571 37 20.745511763452296 31.760941876207365 28.62974557176523 18.863800788575112 38 20.961449201597013 31.3529297765382 27.53543725779454 20.150183764070245 39 20.564885717300584 31.387482525343856 27.471366392244732 20.576265365110828 40 22.354180158446077 29.699708336178244 27.944759741150943 20.001351764224733 41 19.655203568105815 28.943892818890493 29.13231219960316 22.268591413400536 42 20.8095826290021 30.564009829257007 27.308189139402067 21.31821840233883 43 20.66240585065626 29.68212160774423 28.76243916198894 20.893033379610568 44 20.347430992781167 30.91222705225051 28.10724731836875 20.63309463659957 45 20.094733843831232 31.431690732897593 27.750271214939477 20.723304208331694 46 20.897240400922236 30.99533296504655 27.215979508357833 20.89144712567338 47 20.497435441188948 30.529939853388754 28.605951762707445 20.366672942714853 48 21.012623132961874 29.446390479165935 29.19996937840226 20.341017009469937 49 20.470331189131816 29.446252544040963 29.166451143033896 20.916965123793325 50 19.894521009933396 31.067679938094717 29.020929586187727 20.016869465784158 51 19.363677681476073 31.1828557674469 28.282976667583938 21.170489883493097 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1558.0 1 2039.5 2 2521.0 3 24012.5 4 45504.0 5 28909.0 6 12314.0 7 12753.0 8 13192.0 9 15568.5 10 17945.0 11 19852.0 12 21759.0 13 22247.5 14 22736.0 15 21513.5 16 20291.0 17 18737.0 18 17183.0 19 15625.5 20 14068.0 21 13187.5 22 12307.0 23 11876.5 24 11446.0 25 12060.0 26 15084.5 27 17495.0 28 18297.5 29 19100.0 30 21679.0 31 24258.0 32 26972.5 33 29687.0 34 33808.0 35 37929.0 36 42085.0 37 46241.0 38 51412.5 39 56584.0 40 62698.5 41 68813.0 42 76675.5 43 84538.0 44 92456.5 45 100375.0 46 99998.0 47 99621.0 48 96150.5 49 92680.0 50 86854.0 51 81028.0 52 77568.5 53 74109.0 54 70858.0 55 67607.0 56 65141.0 57 62675.0 58 60102.5 59 57530.0 60 54746.0 61 51962.0 62 47557.5 63 43153.0 64 38444.0 65 33735.0 66 29461.0 67 25187.0 68 20902.5 69 16618.0 70 14235.5 71 11853.0 72 10021.5 73 8190.0 74 7018.0 75 4741.5 76 3637.0 77 2820.0 78 2003.0 79 1492.5 80 982.0 81 701.5 82 421.0 83 377.0 84 333.0 85 242.5 86 152.0 87 105.0 88 58.0 89 45.5 90 33.0 91 27.0 92 21.0 93 11.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1449957.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.40769896294405 #Duplication Level Percentage of deduplicated Percentage of total 1 76.62082253289307 21.766212608075865 2 7.164311003350429 4.070431805201733 3 3.137575664972413 2.6739391489198594 4 1.891451450885249 2.149271336790876 5 1.2469573021890674 1.7711593830115941 6 0.8803332219121022 1.500494469309457 7 0.7014443741496286 1.394849443406534 8 0.5674838640467014 1.2896728620933569 9 0.4983359473049854 1.2740919816108216 >10 6.451232086316222 43.00637987505706 >50 0.8025846655198423 14.504973544437142 >100 0.034774116906166185 1.558928854699213 >500 0.0012244407064264029 0.24299783130114472 >1k 0.0012244407064264029 0.3999411772545895 >5k 0.0 0.0 >10k+ 2.448881412852806E-4 2.396655678830729 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34451 2.3760014952167547 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTT 1494 0.10303753835458568 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05531198511404131 0.0 2 0.0 0.0 0.0 0.15807365321868166 0.0 3 0.0 0.0 0.0 0.24924877082561758 0.0 4 0.0 0.0 0.0 0.36759710805216983 0.0 5 0.0 0.0 0.0 0.6470536712468025 0.0 6 0.0 0.0 0.0 1.2572786641259017 0.0 7 0.0 0.0 0.0 1.6238412587407764 0.0 8 0.0 0.0 0.0 2.173926537131791 0.0 9 0.0 0.0 0.0 2.4964878268803834 0.0 10 0.0 0.0 0.0 2.8487051684981 0.0 11 0.0 0.0 0.0 3.1477485194388524 0.0 12 0.0 0.0 0.0 3.396376582202093 0.0 13 0.0 0.0 0.0 3.559071062107359 0.0 14 0.0 0.0 0.0 3.6569360332754695 0.0 15 0.0 0.0 0.0 3.742662713445985 0.0 16 0.0 0.0 0.0 3.8561833212984937 0.0 17 0.0 0.0 0.0 3.9774972637119586 0.0 18 0.0 0.0 0.0 4.132536344181241 0.0 19 0.0 0.0 0.0 4.229918542411947 0.0 20 6.896756248633581E-5 0.0 0.0 4.329645637767189 0.0 21 1.3793512497267162E-4 0.0 0.0 4.45178719093049 0.0 22 1.3793512497267162E-4 0.0 0.0 4.574135646781249 0.0 23 1.3793512497267162E-4 0.0 0.0 4.725795316688702 0.0 24 1.3793512497267162E-4 0.0 0.0 4.852695631663559 0.0 25 1.3793512497267162E-4 0.0 0.0 4.959871223767325 0.0 26 1.3793512497267162E-4 0.0 0.0 5.071115902057785 0.0 27 1.3793512497267162E-4 0.0 0.0 5.180912261536032 0.0 28 1.3793512497267162E-4 0.0 0.0 5.293743193763677 0.0 29 1.3793512497267162E-4 0.0 0.0 5.418022741364054 0.0 30 1.3793512497267162E-4 0.0 0.0 5.576786070207599 0.0 31 1.3793512497267162E-4 0.0 0.0 5.709755530681255 0.0 32 1.3793512497267162E-4 0.0 0.0 5.849001039341167 0.0 33 1.3793512497267162E-4 0.0 0.0 5.974039230128893 0.0 34 1.3793512497267162E-4 0.0 0.0 6.106319014977686 0.0 35 1.3793512497267162E-4 0.0 0.0 6.243771367012953 0.0 36 1.3793512497267162E-4 0.0 0.0 6.381085783923248 0.0 37 1.3793512497267162E-4 0.0 0.0 6.529779848643788 0.0 38 1.3793512497267162E-4 0.0 0.0 6.684405123738152 0.0 39 1.3793512497267162E-4 0.0 0.0 6.872617601763363 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 20 7.0338976E-4 45.0 40 TAGACGC 20 7.0338976E-4 45.0 36 TCGATAG 50 2.1827873E-11 45.0 1 ATACGCG 20 7.0338976E-4 45.0 22 CGTTTTT 13055 0.0 43.018 1 ATTAGCG 75 0.0 42.000004 1 ACGTTAG 60 3.6379788E-12 41.250004 1 TATTGCG 105 0.0 40.714287 1 ACGTAAG 100 0.0 40.5 1 TGCGACG 45 1.9288564E-8 40.0 1 AGGGTAC 555 0.0 39.72973 6 AGGGCGA 1665 0.0 39.18919 6 CGTAAGG 305 0.0 39.098362 2 CGTTAGG 190 0.0 39.078945 2 GCGATCG 185 0.0 38.91892 9 GACCGAT 850 0.0 38.382355 9 AGTACGG 170 0.0 38.38235 2 GTTTTTT 15050 0.0 38.37708 2 ACGGGAT 510 0.0 37.941177 5 TAGGGAT 1340 0.0 37.611942 5 >>END_MODULE