##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547299_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2248753 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290642413817793 31.0 31.0 33.0 30.0 34.0 2 31.68251648802692 31.0 31.0 34.0 30.0 34.0 3 31.62933190083571 31.0 31.0 34.0 30.0 34.0 4 35.493450814740434 37.0 35.0 37.0 33.0 37.0 5 35.44320830255702 37.0 35.0 37.0 33.0 37.0 6 35.484862054658734 37.0 35.0 37.0 33.0 37.0 7 35.90179579526964 37.0 35.0 37.0 35.0 37.0 8 35.89998234577119 37.0 35.0 37.0 35.0 37.0 9 37.64295189378291 39.0 37.0 39.0 35.0 39.0 10 36.93187157504626 39.0 37.0 39.0 32.0 39.0 11 36.68696784395618 39.0 35.0 39.0 32.0 39.0 12 36.416798554576694 39.0 35.0 39.0 32.0 39.0 13 36.319066166893386 39.0 35.0 39.0 32.0 39.0 14 37.42260666244803 40.0 36.0 41.0 32.0 41.0 15 37.510554960905 40.0 36.0 41.0 32.0 41.0 16 37.57135310102977 40.0 36.0 41.0 32.0 41.0 17 37.45838071144318 39.0 36.0 41.0 32.0 41.0 18 37.21042551138342 39.0 36.0 40.0 32.0 41.0 19 37.02799507104604 38.0 35.0 40.0 32.0 41.0 20 36.77130969919774 38.0 35.0 40.0 31.0 41.0 21 36.64179480805584 38.0 35.0 40.0 31.0 41.0 22 36.544440852330155 38.0 35.0 40.0 31.0 41.0 23 36.418134850737275 38.0 35.0 40.0 31.0 41.0 24 36.28174325948648 38.0 35.0 40.0 30.0 41.0 25 36.17290738467052 38.0 35.0 40.0 30.0 41.0 26 35.93800074974886 38.0 35.0 40.0 30.0 41.0 27 35.92271227653726 38.0 35.0 40.0 30.0 41.0 28 35.881366695230646 38.0 35.0 40.0 30.0 41.0 29 35.8252742742311 38.0 35.0 40.0 30.0 41.0 30 35.739102071236815 38.0 35.0 40.0 29.0 41.0 31 35.582024793296554 38.0 34.0 40.0 28.0 41.0 32 35.25780154601239 38.0 34.0 40.0 26.0 41.0 33 34.86891801811937 38.0 34.0 40.0 24.0 41.0 34 34.40214643404589 38.0 33.0 40.0 22.0 41.0 35 34.07052797706106 37.0 33.0 40.0 20.0 41.0 36 33.78081896944662 37.0 33.0 40.0 18.0 41.0 37 33.71348787528021 37.0 33.0 40.0 18.0 41.0 38 33.597151399019815 37.0 33.0 40.0 18.0 41.0 39 33.447811742774775 37.0 33.0 40.0 17.0 41.0 40 33.3233102968623 37.0 32.0 40.0 16.0 41.0 41 33.2630542349471 37.0 32.0 40.0 16.0 41.0 42 33.16547126340687 36.0 32.0 40.0 15.0 41.0 43 33.04512367521021 36.0 32.0 40.0 15.0 41.0 44 32.92479031712242 36.0 32.0 40.0 15.0 41.0 45 32.763093590091934 36.0 31.0 40.0 15.0 41.0 46 32.66774830317069 35.0 31.0 40.0 15.0 41.0 47 32.61712691433875 35.0 31.0 40.0 15.0 41.0 48 32.47003294714893 35.0 31.0 40.0 14.0 41.0 49 32.3267366402624 35.0 31.0 39.0 13.0 41.0 50 32.215576366101565 35.0 31.0 39.0 13.0 41.0 51 31.751722399036264 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 11.0 13 18.0 14 43.0 15 99.0 16 303.0 17 686.0 18 1688.0 19 3183.0 20 5375.0 21 8573.0 22 12933.0 23 19238.0 24 28297.0 25 42808.0 26 59096.0 27 66098.0 28 64238.0 29 63170.0 30 67061.0 31 76721.0 32 90725.0 33 111741.0 34 161035.0 35 200153.0 36 195279.0 37 227255.0 38 309681.0 39 433107.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.05427763742839 22.18104878570479 25.132818055162126 21.631855521704697 2 38.48532942479677 23.106050331005672 25.74155543094328 12.667064813254278 3 26.802632392263625 23.89937890021714 36.621807730773455 12.67618097674578 4 23.69442086347411 26.49108194630535 36.43668290826071 13.377814281959823 5 21.51401243266824 29.62615280557713 35.18047557913208 13.679359182622546 6 20.410556428384975 38.040193831870376 32.230618480553446 9.318631259191205 7 82.33821144429824 2.6526256996655477 13.773277901130093 1.235884954906119 8 82.59199654208355 2.3373843192204746 13.689053444286678 1.3815656944093015 9 78.0030087786431 4.495869488556547 15.058523546160918 2.4425981866394397 10 35.52497762093035 29.654790899667503 22.252154860938482 12.568076618463655 11 28.257038456424517 25.53619717238843 30.55368908901956 15.653075282167494 12 25.20641439944716 22.048486427811326 34.85167112617526 17.893428046566253 13 22.117057764903482 24.592740954653536 35.68004133846625 17.61015994197673 14 20.291690550273863 25.52023276900576 36.14412076381888 18.0439559169015 15 19.514860013527496 24.41619866654986 38.60343932837444 17.465501991548205 16 22.730153111524476 23.460468979919096 36.63279159605345 17.176586312502973 17 22.47912509733172 24.216665858811528 33.68947145373458 19.614737590122168 18 22.993054372801282 23.81173032342814 34.906412576214464 18.288802727556117 19 24.195987731867394 26.099442668892493 31.846005319392567 17.858564279847542 20 25.844501374761926 25.44343465022615 31.975632717332676 16.736431257679257 21 24.76692638097648 25.13335168424456 33.24682612985953 16.852895804919438 22 24.05755545406721 23.066695186176517 33.04280194401075 19.83294741574553 23 21.5990373331353 26.03807532441313 33.093229892300315 19.26965745015126 24 21.475502200552928 25.187648443381732 35.13293812170568 18.203911234359666 25 21.753078261596535 25.953761929389312 33.48553620606621 18.807623602947945 26 20.758037899226817 27.347467685423876 32.51135184700143 19.383142568347882 27 20.00566536209179 26.31369474548783 33.87023830540748 19.81040158701289 28 19.579429132501435 27.139085528735258 34.35526267224546 18.926222666517845 29 20.740694954047868 25.366547593266137 34.286291113341484 19.606466339344518 30 21.02840996765763 25.732617143812593 34.487291401056495 18.751681487473277 31 22.73113143150893 26.001655139537334 32.32596020994747 18.941253219006267 32 22.713343795427953 25.97421771088243 32.29469843953516 19.01774005415446 33 22.385606600635995 26.49108194630535 31.210097329497728 19.913214123560923 34 20.815091741956543 27.846499815675624 31.806427829112398 19.531980613255435 35 21.067053607043547 28.405209464979038 31.17332139190031 19.354415536077106 36 22.992387336448246 29.147265173187098 28.560762342507157 19.2995851478575 37 21.91405636812936 29.587197882559803 28.881918111949155 19.616827637361684 38 21.93015417878264 29.302062076181777 28.75967258298266 20.008111162052924 39 21.922594433448225 28.732857721590587 28.23831696944929 21.106230875511894 40 23.228873958144803 27.99342568970447 28.36732180012656 20.410378552024167 41 20.23837211112114 27.76320920972646 29.42742044146245 22.570998237689956 42 21.42445168500053 28.582151974894533 28.43669358084236 21.556702759262578 43 21.457581157201346 28.010635227612813 29.162028911134303 21.369754704051537 44 21.27067757108051 28.73877211058751 28.9046862861328 21.08586403219918 45 21.071945206965818 28.7403729978348 28.574814575011125 21.612867220188257 46 21.58436253336849 28.76309670292824 28.595270356504248 21.05727040719901 47 20.80175101489581 28.42908936641774 29.865841201768266 20.903318416918175 48 21.532956265094477 28.169923508717943 29.843073027584623 20.45404719860296 49 21.55385673748962 27.87914012788421 29.740082614675778 20.82692051995039 50 20.720239172554745 28.61372502893826 29.7605828652591 20.905452933247894 51 20.303563797357914 29.02101742610238 29.12445252991325 21.550966246626462 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1984.0 1 2787.0 2 3590.0 3 35580.0 4 67570.0 5 46162.5 6 24755.0 7 24772.5 8 24790.0 9 26133.0 10 27476.0 11 28494.5 12 29513.0 13 29310.5 14 29108.0 15 27785.0 16 26462.0 17 24666.0 18 22870.0 19 21956.0 20 21042.0 21 20426.5 22 19811.0 23 19789.5 24 19768.0 25 20478.0 26 23491.0 27 25794.0 28 28944.5 29 32095.0 30 36211.0 31 40327.0 32 46103.5 33 51880.0 34 57260.0 35 62640.0 36 66827.0 37 71014.0 38 77013.5 39 83013.0 40 90983.5 41 98954.0 42 108177.0 43 117400.0 44 125654.5 45 133909.0 46 139206.0 47 144503.0 48 143918.0 49 143333.0 50 143327.5 51 143322.0 52 136344.0 53 129366.0 54 119499.5 55 109633.0 56 106943.5 57 104254.0 58 98951.5 59 93649.0 60 88361.0 61 83073.0 62 75988.5 63 68904.0 64 60837.5 65 52771.0 66 45288.0 67 37805.0 68 31260.5 69 24716.0 70 21750.5 71 18785.0 72 16209.0 73 13633.0 74 12208.5 75 8766.0 76 6748.0 77 4967.0 78 3186.0 79 2551.5 80 1917.0 81 1348.5 82 780.0 83 587.5 84 395.0 85 258.5 86 122.0 87 89.0 88 56.0 89 48.5 90 41.0 91 25.5 92 10.0 93 9.5 94 9.0 95 7.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2248753.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.828572892942656 #Duplication Level Percentage of deduplicated Percentage of total 1 78.30615037839081 22.574545641491685 2 6.5674106538282695 3.786581535035529 3 2.782659528380178 2.406603091504482 4 1.66675658575571 1.9220085490900287 5 1.1450624233838398 1.6505257769745294 6 0.8651484965297094 1.4964597897255885 7 0.6703837813943435 1.3528345395721357 8 0.5737156298641256 1.3231522284286763 9 0.4588603633816043 1.1905460490085862 >10 6.048425578938142 41.442630234729386 >50 0.8572956639459858 15.866530335210047 >100 0.05531073237843363 2.3664097764862544 >500 0.001880122552649599 0.3319374888890563 >1k 7.83384396937333E-4 0.27990428883460083 >5k 0.0 0.0 >10k+ 1.566768793874666E-4 2.0093306750195343 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44486 1.9782519467455966 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4469090202436636E-5 0.0 0.0 0.031039424961300775 0.0 2 4.4469090202436636E-5 0.0 0.0 0.08916052585588546 0.0 3 4.4469090202436636E-5 0.0 0.0 0.14919379762917492 0.0 4 4.4469090202436636E-5 0.0 0.0 0.2167868147368786 0.0 5 4.4469090202436636E-5 0.0 0.0 0.3982207027628201 0.0 6 4.4469090202436636E-5 0.0 0.0 0.8273474232163337 0.0 7 4.4469090202436636E-5 0.0 0.0 1.0933615208073098 0.0 8 4.4469090202436636E-5 0.0 0.0 1.4956733798687538 0.0 9 4.4469090202436636E-5 0.0 0.0 1.7521710921564084 0.0 10 4.4469090202436636E-5 0.0 0.0 2.058785469102209 0.0 11 4.4469090202436636E-5 0.0 0.0 2.2914477490413576 0.0 12 4.4469090202436636E-5 0.0 0.0 2.480485851491916 0.0 13 4.4469090202436636E-5 0.0 0.0 2.6170948965938012 0.0 14 4.4469090202436636E-5 0.0 0.0 2.7116806514543836 0.0 15 4.4469090202436636E-5 0.0 0.0 2.7808300867191726 0.0 16 4.4469090202436636E-5 0.0 0.0 2.8674558744335195 0.0 17 4.4469090202436636E-5 0.0 0.0 2.964176145623819 0.0 18 4.4469090202436636E-5 0.0 0.0 3.0894455727240833 0.0 19 4.4469090202436636E-5 0.0 0.0 3.172736178673247 0.0 20 4.4469090202436636E-5 0.0 0.0 3.2639422826784443 0.0 21 4.4469090202436636E-5 0.0 0.0 3.3732028373058314 0.0 22 4.4469090202436636E-5 0.0 0.0 3.490289951808847 0.0 23 4.4469090202436636E-5 0.0 0.0 3.6268989969107324 0.0 24 4.4469090202436636E-5 0.0 0.0 3.7411845587309944 0.0 25 4.4469090202436636E-5 0.0 0.0 3.8502227679073693 0.0 26 4.4469090202436636E-5 0.0 0.0 3.956326017130383 0.0 27 4.4469090202436636E-5 0.0 0.0 4.068521531711131 4.4469090202436636E-5 28 4.4469090202436636E-5 0.0 0.0 4.184852671680705 4.4469090202436636E-5 29 4.4469090202436636E-5 0.0 0.0 4.306431164294167 4.4469090202436636E-5 30 4.4469090202436636E-5 0.0 0.0 4.465941790850307 4.4469090202436636E-5 31 4.4469090202436636E-5 0.0 0.0 4.599793752359641 4.4469090202436636E-5 32 4.4469090202436636E-5 0.0 0.0 4.760949735253272 4.4469090202436636E-5 33 4.4469090202436636E-5 0.0 0.0 4.907341980199693 4.4469090202436636E-5 34 4.4469090202436636E-5 0.0 0.0 5.047908774329595 4.4469090202436636E-5 35 4.4469090202436636E-5 0.0 0.0 5.197147041048972 4.4469090202436636E-5 36 4.4469090202436636E-5 0.0 0.0 5.335579318849158 4.4469090202436636E-5 37 4.4469090202436636E-5 0.0 0.0 5.48855298914554 4.4469090202436636E-5 38 4.4469090202436636E-5 0.0 0.0 5.6721213935011985 4.4469090202436636E-5 39 4.4469090202436636E-5 0.0 0.0 5.9276407858044 4.4469090202436636E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 25595 0.0 43.39129 1 CGTTAGG 240 0.0 43.124996 2 TACGGGA 605 0.0 40.16529 4 GTTTACG 40 3.4601908E-7 39.375004 1 GGGCGAT 4490 0.0 39.237194 7 AGGGCGA 2305 0.0 38.167027 6 GTTTTTT 29740 0.0 38.092636 2 GGCGATA 910 0.0 38.076927 8 GCGTTAG 155 0.0 37.741936 1 CGTAAGG 430 0.0 37.67442 2 CGCAATA 30 1.14026945E-4 37.499996 43 CGCGTAA 30 1.14026945E-4 37.499996 31 AACACGT 1070 0.0 37.429905 41 CACGACC 1165 0.0 37.274677 27 GACCGAT 1195 0.0 37.092052 9 ACGACCA 1180 0.0 36.991528 28 AGGGATC 1640 0.0 36.905487 6 TATGGGA 2015 0.0 36.848637 4 GGCGATT 1240 0.0 36.834675 8 TTACGCG 55 2.752131E-9 36.818184 1 >>END_MODULE