##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547295_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2049776 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30579536495695 31.0 31.0 33.0 30.0 34.0 2 31.70612837695436 31.0 31.0 34.0 30.0 34.0 3 31.750351745751733 31.0 31.0 34.0 30.0 34.0 4 35.56409675984108 37.0 35.0 37.0 33.0 37.0 5 35.48453391980392 37.0 35.0 37.0 33.0 37.0 6 35.51632373488615 37.0 35.0 37.0 33.0 37.0 7 35.900774523655265 37.0 35.0 37.0 35.0 37.0 8 35.89241995222893 37.0 35.0 37.0 35.0 37.0 9 37.62536443006455 39.0 37.0 39.0 35.0 39.0 10 36.93464554175676 39.0 37.0 39.0 32.0 39.0 11 36.66855500308326 39.0 35.0 39.0 32.0 39.0 12 36.359968601447186 38.0 35.0 39.0 32.0 39.0 13 36.25809893373715 39.0 35.0 39.0 32.0 39.0 14 37.34215543552076 39.0 36.0 41.0 32.0 41.0 15 37.43693164521392 39.0 36.0 41.0 32.0 41.0 16 37.48503592587678 39.0 36.0 41.0 32.0 41.0 17 37.36753040332212 39.0 36.0 41.0 32.0 41.0 18 37.19137652114182 39.0 36.0 41.0 32.0 41.0 19 37.100743691017946 39.0 35.0 41.0 31.0 41.0 20 36.932338460397624 39.0 35.0 41.0 31.0 41.0 21 36.81517199928187 38.0 35.0 41.0 31.0 41.0 22 36.706924073654875 38.0 35.0 40.0 31.0 41.0 23 36.56614430064553 38.0 35.0 40.0 31.0 41.0 24 36.439120664892165 38.0 35.0 40.0 30.0 41.0 25 36.32719672783758 38.0 35.0 40.0 30.0 41.0 26 36.096165629805405 38.0 35.0 40.0 30.0 41.0 27 36.09337459312627 38.0 35.0 40.0 30.0 41.0 28 36.10472949239332 38.0 35.0 40.0 30.0 41.0 29 36.08205238035766 38.0 35.0 40.0 30.0 41.0 30 36.01422057824855 38.0 35.0 40.0 30.0 41.0 31 35.9134871322525 38.0 35.0 40.0 29.0 41.0 32 35.71275788183684 38.0 34.0 40.0 28.0 41.0 33 35.4643351273505 38.0 34.0 40.0 27.0 41.0 34 35.183336618245114 38.0 34.0 40.0 25.0 41.0 35 34.97908259243937 38.0 34.0 40.0 24.0 41.0 36 34.73022369273521 38.0 34.0 40.0 23.0 41.0 37 34.68350005073725 38.0 34.0 40.0 23.0 41.0 38 34.58151866350274 38.0 33.0 40.0 23.0 41.0 39 34.428061895543706 37.0 33.0 40.0 23.0 41.0 40 34.30455864445676 37.0 33.0 40.0 22.0 41.0 41 34.2513674664939 37.0 33.0 40.0 22.0 41.0 42 34.15152728883546 37.0 33.0 40.0 22.0 41.0 43 34.02052077885583 37.0 33.0 40.0 22.0 41.0 44 33.91118346590066 37.0 33.0 40.0 21.0 41.0 45 33.75305545581566 36.0 33.0 40.0 20.0 41.0 46 33.65166291341102 36.0 33.0 40.0 20.0 41.0 47 33.59196517082842 36.0 33.0 40.0 20.0 41.0 48 33.46018979634848 36.0 32.0 40.0 20.0 41.0 49 33.31252975934932 36.0 32.0 40.0 20.0 41.0 50 33.18225942737158 35.0 32.0 40.0 20.0 41.0 51 32.69358700658023 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 3.0 12 4.0 13 7.0 14 44.0 15 84.0 16 270.0 17 632.0 18 1385.0 19 2513.0 20 4194.0 21 6686.0 22 10102.0 23 14326.0 24 20766.0 25 29684.0 26 39688.0 27 45892.0 28 47902.0 29 51752.0 30 58308.0 31 68359.0 32 82998.0 33 103383.0 34 151417.0 35 183610.0 36 176653.0 37 218425.0 38 298893.0 39 431680.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.08348034126656 22.502605162710463 26.416398669903447 16.997515826119535 2 35.327909000788374 24.50370186791142 26.892548258931708 13.275840872368494 3 28.852616090733818 25.361551701259067 32.66996003465745 13.115872173349674 4 25.18680089922021 28.18849474284019 32.007399832957354 14.617304524982242 5 23.125258564838305 31.182821927859433 31.267270179765983 14.424649327536276 6 22.26131050417216 40.05208373988182 28.280407224984582 9.406198530961433 7 87.35739905238427 2.794256543153984 8.644847046701688 1.2034973577600674 8 87.48346160751224 2.554913317357604 8.638456104471903 1.3231689706582572 9 82.42490886809095 4.875703491503462 10.201748874023307 2.497638766382278 10 37.89965342554504 33.23455831271319 16.60371669880026 12.262071562941513 11 30.39663846195877 26.311167659295453 27.177701368344636 16.11449251040114 12 28.098972765804653 22.910796106501394 30.680571925908 18.30965920178595 13 24.343245310707122 25.20914480411518 32.075992693835815 18.371617191341883 14 22.142175535278 26.454646751645054 31.916267923909736 19.486909789167207 15 21.668270093902944 25.105865226249115 34.90239909141292 18.323465588435027 16 25.374333585718635 23.746594749865352 32.852858068393815 18.0262135960222 17 24.789196478054187 24.120440477398507 30.398248393970857 20.692114650576453 18 24.61200638508793 24.244258884873275 31.616283925658216 19.527450804380575 19 26.736287282122532 25.77706051783219 28.837248557891204 18.64940364215407 20 28.091020677381334 25.949615958036393 28.38588216468531 17.573481199896964 21 27.32269282106923 25.26524849544536 29.42560552957982 17.9864531539056 22 26.31224094730351 23.208731100373896 29.978056138817124 20.500971813505476 23 24.21859754431704 25.654364184184026 29.99269188438151 20.13434638711742 24 23.520862767443855 25.297593493142667 32.15229371404485 19.029250025368626 25 23.81440703764704 26.33443849474284 29.738664127202192 20.112490340407927 26 22.37288367119139 27.691220894380653 29.170358126936797 20.76553730749116 27 22.23262444286595 26.50957958333008 30.374782415249275 20.88301355855469 28 20.81012754564401 27.642386290014127 31.219508863407512 20.327977300934347 29 22.69223563940645 25.38413953524678 31.316153569951062 20.607471255395712 30 23.27688488888542 26.005622077729466 31.292980306140766 19.42451272724434 31 24.195033993958365 26.63486156536129 29.41418964803959 19.75591479264076 32 25.610603304946494 25.94600580746384 28.328607613709988 20.114783273879684 33 24.82851784780386 26.353660107250743 28.34729258221386 20.470529462731538 34 23.23927102278493 26.997340197172765 29.585135156231708 20.1782536238106 35 23.158920779636407 27.96105525676952 29.334278477258003 19.54574548633607 36 24.955019475298766 28.75055615833145 26.971337355886693 19.323087010483096 37 23.75137576008305 29.04195385251852 27.122134321018493 20.084536066379936 38 23.6742453809587 28.36192832777826 27.625701540070718 20.338124751192325 39 23.43202379186799 28.454328668108126 27.09081382551069 21.022833714513194 40 24.69264934314774 27.29068932410176 27.646142798042323 20.370518534708182 41 21.84038646174021 27.75713053523897 28.338267205782486 22.064215797238333 42 23.131454363793896 27.605016353006377 27.42011810070954 21.843411182490186 43 22.63130215204003 27.026758045757195 28.262551615396024 22.079388186806753 44 22.27706832356316 27.39143203940333 28.384077089399035 21.947422547634474 45 21.945715043985295 28.249964874210647 27.430411908423164 22.373908173380897 46 22.522363419222394 28.444620290217077 27.601503774070924 21.431512516489608 47 22.348637119373045 27.691903895840326 28.991606887777007 20.967852097009622 48 22.55914792640757 27.254929319106086 29.262026679988445 20.923896074497897 49 23.11808704951175 27.348988377266586 28.759240034032985 20.77368453918867 50 21.905222814590473 28.07340899688551 28.997217256910023 21.024150931613992 51 21.75515763673689 28.31816744854072 28.377100717346675 21.549574197375712 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1497.0 1 2495.0 2 3493.0 3 18924.5 4 34356.0 5 23965.5 6 13575.0 7 13527.0 8 13479.0 9 14303.5 10 15128.0 11 15656.0 12 16184.0 13 16460.0 14 16736.0 15 15810.0 16 14884.0 17 14114.0 18 13344.0 19 12884.5 20 12425.0 21 12769.0 22 13113.0 23 13701.5 24 14290.0 25 15207.0 26 19336.5 27 22549.0 28 26552.0 29 30555.0 30 35422.0 31 40289.0 32 44192.0 33 48095.0 34 53920.5 35 59746.0 36 65211.5 37 70677.0 38 76133.5 39 81590.0 40 88605.0 41 95620.0 42 103480.0 43 111340.0 44 114454.0 45 117568.0 46 121522.0 47 125476.0 48 129836.5 49 134197.0 50 132425.5 51 130654.0 52 126899.5 53 123145.0 54 119785.5 55 116426.0 56 109659.0 57 102892.0 58 100538.0 59 98184.0 60 91205.0 61 84226.0 62 76682.0 63 69138.0 64 62538.0 65 55938.0 66 48062.0 67 40186.0 68 34591.0 69 28996.0 70 25374.5 71 21753.0 72 18869.0 73 15985.0 74 13748.5 75 9411.5 76 7311.0 77 5440.5 78 3570.0 79 2747.5 80 1925.0 81 1416.0 82 907.0 83 650.5 84 394.0 85 285.5 86 177.0 87 119.5 88 62.0 89 45.5 90 29.0 91 24.5 92 20.0 93 16.5 94 13.0 95 6.5 96 0.0 97 1.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2049776.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.94847704552651 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75035127937693 18.62002502895781 2 5.259343824701304 2.5190654972078153 3 2.27666355645663 1.6356787476656507 4 1.4247418227740913 1.364815873540277 5 0.9763383823910106 1.1690908669678801 6 0.8287103885574681 1.190781103065473 7 0.7015784982482436 1.1761215592653114 8 0.5692942644480952 1.0906984499428083 9 0.5046109268147693 1.0876196877970823 >10 8.487239608920433 49.083043968443214 >50 1.159869072711918 17.753061091076194 >100 0.05981942717595431 2.0356943921466417 >500 0.001027819587977299 0.16821695417492158 >1k 2.055639175954598E-4 0.062078308227853714 >5k 0.0 0.0 >10k+ 2.055639175954598E-4 1.0440084715210893 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21207 1.034600853946968 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4635745564393378E-4 0.0 0.0 0.014782103020037312 0.0 2 1.4635745564393378E-4 0.0 0.0 0.0470783148987987 0.0 3 1.4635745564393378E-4 0.0 0.0 0.08488732427348158 0.0 4 1.4635745564393378E-4 0.0 0.0 0.13718572175691393 0.0 5 1.4635745564393378E-4 0.0 0.0 0.2219266885747516 0.0 6 1.4635745564393378E-4 0.0 0.0 0.4503418910163842 0.0 7 1.4635745564393378E-4 0.0 0.0 0.5687450726323267 0.0 8 1.9514327419191171E-4 0.0 0.0 0.8152110279367112 0.0 9 1.9514327419191171E-4 0.0 0.0 0.9632272014112762 0.0 10 1.9514327419191171E-4 0.0 0.0 1.1356362841598302 0.0 11 1.9514327419191171E-4 0.0 0.0 1.2651138465861635 0.0 12 1.9514327419191171E-4 0.0 0.0 1.3660517051619299 0.0 13 1.9514327419191171E-4 0.0 0.0 1.4346933518589349 0.0 14 2.4392909273988962E-4 0.0 0.0 1.4834791704069128 0.0 15 2.4392909273988962E-4 0.0 0.0 1.5224102536081991 0.0 16 2.4392909273988962E-4 0.0 0.0 1.5709033572448892 0.0 17 2.4392909273988962E-4 0.0 0.0 1.6207624638009226 0.0 18 2.4392909273988962E-4 0.0 0.0 1.6821838093528267 0.0 19 2.4392909273988962E-4 0.0 0.0 1.7298475540742013 0.0 20 2.4392909273988962E-4 0.0 0.0 1.7779503711625075 0.0 21 2.4392909273988962E-4 0.0 0.0 1.834444349041066 0.0 22 2.4392909273988962E-4 0.0 0.0 1.8968414109639298 0.0 23 2.4392909273988962E-4 0.0 0.0 1.9670929896730178 0.0 24 2.4392909273988962E-4 0.0 0.0 2.0271483323055786 0.0 25 2.4392909273988962E-4 0.0 0.0 2.081934806534958 0.0 26 2.4392909273988962E-4 0.0 0.0 2.1392581433288322 0.0 27 2.4392909273988962E-4 0.0 0.0 2.1997525583283246 0.0 28 2.4392909273988962E-4 0.0 0.0 2.2642474104487516 0.0 29 2.4392909273988962E-4 0.0 0.0 2.3345477749763877 0.0 30 2.4392909273988962E-4 0.0 0.0 2.4318754829796037 0.0 31 2.4392909273988962E-4 0.0 0.0 2.5142747305071382 0.0 32 2.4392909273988962E-4 0.0 0.0 2.6047236380950896 0.0 33 2.4392909273988962E-4 0.0 0.0 2.6815125164896068 0.0 34 2.4392909273988962E-4 0.0 0.0 2.7655216960292246 0.0 35 2.4392909273988962E-4 0.0 0.0 2.8565560334397513 0.0 36 2.4392909273988962E-4 0.0 0.0 2.945785295564003 0.0 37 2.4392909273988962E-4 0.0 0.0 3.038966208990641 0.0 38 2.4392909273988962E-4 0.0 0.0 3.160735612086394 0.0 39 2.9271491128786756E-4 0.0 0.0 3.3562691728266896 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGAG 80 0.0 45.0 1 CGTTTTT 12840 0.0 41.337616 1 GGGCGAT 5445 0.0 39.13223 7 AGGGCGA 2820 0.0 39.015957 6 ATTAGCG 150 0.0 39.000004 1 CATACGA 755 0.0 38.741722 18 GACACGA 1140 0.0 38.289474 25 GCGAGAC 1150 0.0 38.152176 21 CGTTAGG 295 0.0 38.13559 2 CACGACC 1160 0.0 37.823277 27 AACACGT 1060 0.0 37.78302 41 TAGGGAT 2650 0.0 37.698112 5 TACGGGA 740 0.0 37.398647 4 TATGGGC 795 0.0 37.35849 4 AGGGATT 2840 0.0 37.31514 6 AAGGGAT 2960 0.0 37.24662 5 ACACGAC 1180 0.0 36.991524 26 ACGACCA 1180 0.0 36.991524 28 TTACGGG 505 0.0 36.980198 3 ACATACG 785 0.0 36.97452 17 >>END_MODULE