SRR1547293_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547293_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	139527
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	957	0.6858887527145283	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTATG	25	3.873147E-5	45.0	1
ACTATTC	25	3.873147E-5	45.0	41
CCGATTG	20	7.0119696E-4	45.0	11
TTAGCGG	25	3.873147E-5	45.0	2
GGGTCGT	20	7.0119696E-4	45.0	7
TATGGGA	70	0.0	45.0	4
CGCATGG	20	7.0119696E-4	45.0	2
CGCATCT	25	3.873147E-5	45.0	42
ATCAGCA	20	7.0119696E-4	45.0	22
CGATTAA	20	7.0119696E-4	45.0	24
ACGGGAT	20	7.0119696E-4	45.0	5
TAGTTAG	25	3.873147E-5	45.0	1
TCAATTG	20	7.0119696E-4	45.0	1
AATGCGG	20	7.0119696E-4	45.0	2
AGCGATT	20	7.0119696E-4	45.0	22
GCGATGA	35	1.2016972E-7	45.0	9
GCGATAA	20	7.0119696E-4	45.0	9
ATTGGGC	20	7.0119696E-4	45.0	4
CATCGGC	20	7.0119696E-4	45.0	33
TATAGCG	25	3.873147E-5	45.0	1