##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547293_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 139527 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277509012592546 31.0 31.0 33.0 30.0 34.0 2 31.685989091717015 31.0 31.0 34.0 30.0 34.0 3 31.800303883836104 31.0 31.0 34.0 30.0 34.0 4 35.583564471392634 37.0 35.0 37.0 33.0 37.0 5 35.46857597454256 37.0 35.0 37.0 33.0 37.0 6 35.51034566786357 37.0 35.0 37.0 33.0 37.0 7 35.860815469407356 37.0 35.0 37.0 35.0 37.0 8 35.8482945953113 37.0 35.0 37.0 35.0 37.0 9 37.576383065643206 39.0 37.0 39.0 35.0 39.0 10 36.917886860607624 39.0 37.0 39.0 32.0 39.0 11 36.59486694331563 39.0 35.0 39.0 32.0 39.0 12 36.102704136117026 38.0 35.0 39.0 32.0 39.0 13 35.83074243694769 38.0 35.0 39.0 30.0 39.0 14 36.85218631519348 39.0 35.0 41.0 31.0 41.0 15 37.05949386140317 39.0 35.0 41.0 31.0 41.0 16 37.220251277530515 39.0 35.0 41.0 32.0 41.0 17 37.11587004665763 39.0 35.0 41.0 32.0 41.0 18 37.003268184652434 39.0 35.0 41.0 32.0 41.0 19 36.92300414973446 38.0 35.0 41.0 31.0 41.0 20 36.77467443577229 38.0 35.0 40.0 31.0 41.0 21 36.6234420578096 38.0 35.0 40.0 31.0 41.0 22 36.52998344406459 38.0 35.0 40.0 31.0 41.0 23 36.432726282368286 38.0 35.0 40.0 31.0 41.0 24 36.299418750492734 38.0 35.0 40.0 30.0 41.0 25 36.172174561196044 38.0 35.0 40.0 30.0 41.0 26 35.907831459144106 38.0 34.0 40.0 30.0 41.0 27 35.86832656045067 38.0 34.0 40.0 30.0 41.0 28 35.92610749173995 38.0 35.0 40.0 30.0 41.0 29 35.95801529453081 38.0 35.0 40.0 30.0 41.0 30 35.945566091150816 38.0 35.0 40.0 30.0 41.0 31 35.83748665132914 38.0 35.0 40.0 30.0 41.0 32 35.62982075153913 38.0 34.0 40.0 29.0 41.0 33 35.48645065112846 38.0 34.0 40.0 28.0 41.0 34 35.25723336701857 38.0 34.0 40.0 27.0 41.0 35 35.13018268865524 37.0 34.0 40.0 26.0 41.0 36 34.86251406537803 37.0 34.0 40.0 25.0 41.0 37 34.81908877851598 37.0 34.0 40.0 25.0 41.0 38 34.73594358081232 37.0 33.0 40.0 25.0 41.0 39 34.59894500705956 37.0 33.0 40.0 24.0 41.0 40 34.437900908067974 37.0 33.0 40.0 23.0 41.0 41 34.4004386247823 37.0 33.0 40.0 23.0 41.0 42 34.29643724870455 36.0 33.0 40.0 23.0 41.0 43 34.18392139155862 36.0 33.0 40.0 23.0 41.0 44 34.06844553383933 36.0 33.0 40.0 23.0 41.0 45 33.887892665935624 36.0 33.0 40.0 23.0 41.0 46 33.816178947443866 35.0 33.0 40.0 23.0 41.0 47 33.76607394984483 35.0 33.0 40.0 23.0 41.0 48 33.62579285729644 35.0 33.0 40.0 23.0 41.0 49 33.51549879234843 35.0 32.0 40.0 22.0 41.0 50 33.364624767966056 35.0 32.0 39.0 22.0 41.0 51 32.86545256473657 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 1.0 15 4.0 16 23.0 17 61.0 18 82.0 19 157.0 20 294.0 21 441.0 22 642.0 23 981.0 24 1322.0 25 1755.0 26 2284.0 27 2786.0 28 3047.0 29 3496.0 30 4014.0 31 4856.0 32 6034.0 33 7493.0 34 11538.0 35 15529.0 36 11585.0 37 14226.0 38 19647.0 39 27219.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.32616626172712 23.361069900449376 28.278397729471717 15.034366108351788 2 30.825574978319608 26.145477219462897 29.404344678807686 13.624603123409806 3 28.62170045940929 26.31175328072703 31.315085969023915 13.751460290839765 4 25.57282819812653 28.567230715202076 31.157410393687247 14.702530692984153 5 22.93247901839787 32.603725443820906 29.705361686268606 14.758433851512612 6 22.876575859869416 41.26154794412551 26.126126126126124 9.735750069878948 7 88.3793100976872 3.5527173951994957 6.659642936492578 1.4083295706207402 8 88.51906799400832 2.9965526385574117 6.579371734502999 1.9050076329312609 9 83.16813233281015 5.52366208690791 8.603352756097387 2.704852824184566 10 44.64512244941839 28.906949909336543 14.552738896414313 11.89518874483075 11 35.600994789538944 25.016663441484443 23.723007016563102 15.659334752413512 12 31.905652669375822 22.21003820049166 27.65199567108875 18.23231345904377 13 24.13583034108094 29.167114608642052 28.757158112766707 17.9398969375103 14 20.0620668401098 31.43620947916891 30.256509492786343 18.245214187934952 15 18.401456348950383 25.49829065342192 38.1503221598687 17.949930837759002 16 22.432217420284246 22.4644692425122 36.48541142574555 18.617901911458 17 22.543307030180536 22.8658252524601 28.480509148766902 26.110358568592456 18 23.636285450127932 24.156614848738954 31.75586087280598 20.451238828327135 19 27.540189354031835 24.896973345660697 27.33019415596981 20.232643144337654 20 28.414572089989754 25.78067327470669 26.628537845721617 19.176216789581947 21 25.654532814437346 25.981351279680638 29.51471758154336 18.849398324338658 22 25.466755538354587 23.541680104925927 28.069835945730937 22.921728410988553 23 22.589176288460298 27.143133587047668 27.447734130311694 22.819955994180336 24 21.755645860657793 26.060189067348972 32.073362144961195 20.110802927032044 25 22.83357343023214 25.007346248396367 31.41972521447462 20.739355106896873 26 21.825883162398675 28.4095551398654 27.526571917980032 22.23798977975589 27 20.889146903466713 29.400761143004576 28.573681079647667 21.13641087388104 28 20.102202441104588 27.221971374716002 32.296258071914394 20.37956811226501 29 21.036071871394064 25.10123488643775 32.07766238792492 21.785030854243264 30 21.709059895217415 26.624954309918508 30.89437886573925 20.77160692912483 31 26.351172174561192 24.913457610354985 27.43053315845679 21.304837056627033 32 26.869351451690353 25.711152680126425 27.361012563876525 20.058483304306694 33 26.161961484157185 25.846610333483845 26.835666215141156 21.155761967217813 34 22.5554910519111 26.449361055566307 28.267647122062396 22.7275007704602 35 22.069563597009896 26.481612877794262 29.65590889218574 21.7929146330101 36 27.999598643990055 25.41300250130799 26.81488170748314 19.772517147218817 37 23.371103800698073 29.03237366244526 26.94030546059186 20.65621707626481 38 23.43775756663585 30.00566198656891 25.207307546209694 21.34927290058555 39 22.56194141635669 28.830978950310694 26.693758197338152 21.91332143599447 40 25.577128441090252 25.939065557203982 26.592702487690556 21.89110351401521 41 21.437427881341964 25.581428684053982 28.37730331763745 24.60384011696661 42 23.268614676729236 26.222881592809994 27.032043977151375 23.476459753309395 43 22.40569925534126 25.654532814437346 27.735850408881436 24.203917521339953 44 21.709059895217415 27.27859124040508 28.411705261347265 22.60064360303024 45 20.462706142897076 29.565603789947463 26.8270657292137 23.14462433794176 46 22.57985909537222 28.093487282031436 27.382513778695163 21.94413984390118 47 22.196420764439857 26.81918195044687 28.3486350312126 22.63576225390068 48 23.136740559174925 25.538426254416706 29.810000931719312 21.514832254689058 49 23.014183634708694 25.03816465630308 29.504683681294658 22.442968027693563 50 21.051839428927735 28.872547965626726 28.243279078601276 21.832333526844266 51 21.14071111684477 30.06228185225799 26.279501458499073 22.517505572398175 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 189.0 1 255.5 2 322.0 3 916.5 4 1511.0 5 1051.0 6 591.0 7 625.0 8 659.0 9 754.0 10 849.0 11 888.0 12 927.0 13 935.5 14 944.0 15 857.0 16 770.0 17 789.5 18 809.0 19 763.0 20 717.0 21 714.0 22 711.0 23 725.0 24 739.0 25 885.0 26 1127.0 27 1223.0 28 1479.5 29 1736.0 30 2100.0 31 2464.0 32 2711.5 33 2959.0 34 3214.0 35 3469.0 36 3793.0 37 4117.0 38 4753.0 39 5389.0 40 6542.5 41 7696.0 42 8651.0 43 9606.0 44 9510.0 45 9414.0 46 9413.5 47 9413.0 48 9583.5 49 9754.0 50 9633.0 51 9512.0 52 9102.0 53 8692.0 54 8331.5 55 7971.0 56 7295.5 57 6620.0 58 6358.5 59 6097.0 60 5627.0 61 5157.0 62 4811.0 63 4465.0 64 3959.5 65 3454.0 66 3088.5 67 2723.0 68 2529.5 69 2336.0 70 2029.5 71 1723.0 72 1402.5 73 1082.0 74 931.5 75 599.0 76 417.0 77 333.5 78 250.0 79 197.0 80 144.0 81 101.0 82 58.0 83 41.0 84 24.0 85 16.0 86 8.0 87 6.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 139527.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.58588660259304 #Duplication Level Percentage of deduplicated Percentage of total 1 67.2134412398385 26.607036630902982 2 7.971683594952293 6.311323256430655 3 5.158148208498543 6.125696101829754 4 3.8799268553219997 6.143613780845284 5 3.1231329096735645 6.18159926035821 6 2.5799793601651184 6.127846223311617 7 2.16356163887531 5.995255398596687 8 1.739901870258722 5.5100446508561065 9 1.3307261962956929 4.741017867509514 >10 4.823203519635 25.179355966945465 >50 0.012673582821863741 0.302450421782164 >100 0.0018105118316948201 0.08887168791703398 >500 0.0018105118316948201 0.6858887527145283 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 957 0.6858887527145283 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04228572247665326 0.0 2 0.0 0.0 0.0 0.12757387459058103 0.0 3 0.0 0.0 0.0 0.1834770331190379 0.0 4 0.0 0.0 0.0 0.30961749338837646 0.0 5 0.0 0.0 0.0 0.5095787912017029 0.0 6 0.0 0.0 0.0 0.8887168791703398 0.0 7 0.0 0.0 0.0 1.0442423330251493 0.0 8 0.0 0.0 0.0 1.4154966422269526 0.0 9 0.0 0.0 0.0 1.5767557533667318 0.0 10 0.0 0.0 0.0 1.831903502547894 0.0 11 0.0 0.0 0.0 2.0748672299984947 0.0 12 0.0 0.0 0.0 2.2726784063299577 0.0 13 0.0 0.0 0.0 2.371583994495689 0.0 14 0.0 0.0 0.0 2.410286181169236 0.0 15 0.0 0.0 0.0 2.4540053179671317 0.0 16 0.0 0.0 0.0 2.5471772488478934 0.0 17 0.0 0.0 0.0 2.6482329584954885 0.0 18 0.0 0.0 0.0 2.775090125925448 0.0 19 0.0 0.0 0.0 2.848194256308815 0.0 20 0.0 0.0 0.0 2.929898872619636 0.0 21 0.0 0.0 0.0 3.016620439054807 0.0 22 0.0 0.0 0.0 3.1169594415417805 0.0 23 0.0 0.0 0.0 3.2273323442774515 0.0 24 0.0 0.0 0.0 3.322654396640077 0.0 25 0.0 0.0 0.0 3.406509134432762 0.0 26 0.0 0.0 0.0 3.483196800619235 0.0 27 0.0 0.0 0.0 3.5828190959455877 0.0 28 0.0 0.0 0.0 3.643739204598393 0.0 29 0.0 0.0 0.0 3.7369111354791547 0.0 30 0.0 0.0 0.0 3.8551678169816594 0.0 31 0.0 0.0 0.0 3.9469063335411785 0.0 32 0.0 0.0 0.0 4.04007826442194 0.0 33 0.0 0.0 0.0 4.123216295054004 0.0 34 0.0 0.0 0.0 4.233589197789675 0.0 35 0.0 0.0 0.0 4.3561461222559075 0.0 36 0.0 0.0 0.0 4.459351953385366 0.0 37 0.0 0.0 0.0 4.563991198836067 0.0 38 0.0 0.0 0.0 4.688698244784164 0.0 39 0.0 0.0 0.0 4.928795143592279 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTATG 25 3.873147E-5 45.0 1 ACTATTC 25 3.873147E-5 45.0 41 CCGATTG 20 7.0119696E-4 45.0 11 TTAGCGG 25 3.873147E-5 45.0 2 GGGTCGT 20 7.0119696E-4 45.0 7 TATGGGA 70 0.0 45.0 4 CGCATGG 20 7.0119696E-4 45.0 2 CGCATCT 25 3.873147E-5 45.0 42 ATCAGCA 20 7.0119696E-4 45.0 22 CGATTAA 20 7.0119696E-4 45.0 24 ACGGGAT 20 7.0119696E-4 45.0 5 TAGTTAG 25 3.873147E-5 45.0 1 TCAATTG 20 7.0119696E-4 45.0 1 AATGCGG 20 7.0119696E-4 45.0 2 AGCGATT 20 7.0119696E-4 45.0 22 GCGATGA 35 1.2016972E-7 45.0 9 GCGATAA 20 7.0119696E-4 45.0 9 ATTGGGC 20 7.0119696E-4 45.0 4 CATCGGC 20 7.0119696E-4 45.0 33 TATAGCG 25 3.873147E-5 45.0 1 >>END_MODULE