##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547292_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2024283 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275410108171634 31.0 31.0 33.0 30.0 34.0 2 31.67567528848486 31.0 31.0 34.0 30.0 34.0 3 31.731178397486914 31.0 31.0 34.0 30.0 34.0 4 35.56179644842149 37.0 35.0 37.0 33.0 37.0 5 35.48055385536509 37.0 35.0 37.0 33.0 37.0 6 35.507832649881465 37.0 35.0 37.0 33.0 37.0 7 35.872872024316756 37.0 35.0 37.0 35.0 37.0 8 35.86062818291711 37.0 35.0 37.0 35.0 37.0 9 37.599926986493486 39.0 37.0 39.0 35.0 39.0 10 36.92317131547318 39.0 37.0 39.0 32.0 39.0 11 36.63486380115824 39.0 35.0 39.0 32.0 39.0 12 36.295574284820844 38.0 35.0 39.0 32.0 39.0 13 36.17966559023615 38.0 35.0 39.0 31.0 39.0 14 37.2596015478073 39.0 36.0 41.0 32.0 41.0 15 37.357184741461545 39.0 36.0 41.0 32.0 41.0 16 37.41926054805578 39.0 36.0 41.0 32.0 41.0 17 37.304466816151695 39.0 35.0 41.0 32.0 41.0 18 37.12544145260322 39.0 35.0 41.0 31.0 41.0 19 37.02231901369522 39.0 35.0 41.0 31.0 41.0 20 36.8480573121446 38.0 35.0 41.0 31.0 41.0 21 36.7136635539596 38.0 35.0 40.0 31.0 41.0 22 36.616972528050674 38.0 35.0 40.0 31.0 41.0 23 36.49723778740423 38.0 35.0 40.0 30.0 41.0 24 36.34390003769236 38.0 35.0 40.0 30.0 41.0 25 36.22659381124082 38.0 35.0 40.0 30.0 41.0 26 35.97764739416376 38.0 35.0 40.0 30.0 41.0 27 35.982018818515 38.0 35.0 40.0 30.0 41.0 28 35.98221444333623 38.0 35.0 40.0 30.0 41.0 29 35.95589549484929 38.0 35.0 40.0 30.0 41.0 30 35.88817769056995 38.0 35.0 40.0 29.0 41.0 31 35.7829162226823 38.0 34.0 40.0 29.0 41.0 32 35.586483214056535 38.0 34.0 40.0 28.0 41.0 33 35.33802091901182 38.0 34.0 40.0 26.0 41.0 34 35.019701296706046 38.0 34.0 40.0 25.0 41.0 35 34.81966651896005 38.0 34.0 40.0 24.0 41.0 36 34.57686993369998 38.0 33.0 40.0 23.0 41.0 37 34.52846958651532 37.0 33.0 40.0 23.0 41.0 38 34.41650549849008 37.0 33.0 40.0 23.0 41.0 39 34.24361070067772 37.0 33.0 40.0 23.0 41.0 40 34.1234471662312 37.0 33.0 40.0 22.0 41.0 41 34.06592852876796 37.0 33.0 40.0 22.0 41.0 42 33.97032776543596 37.0 33.0 40.0 22.0 41.0 43 33.83879378525631 36.0 33.0 40.0 21.0 41.0 44 33.7243344927562 36.0 33.0 40.0 21.0 41.0 45 33.560088189250216 36.0 32.0 40.0 20.0 41.0 46 33.46396328971789 36.0 32.0 40.0 20.0 41.0 47 33.38870256777338 35.0 32.0 40.0 20.0 41.0 48 33.24332516747905 35.0 32.0 40.0 20.0 41.0 49 33.08805191764195 35.0 32.0 39.0 20.0 41.0 50 32.9721629831402 35.0 31.0 39.0 20.0 41.0 51 32.49313855819567 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 7.0 13 12.0 14 42.0 15 102.0 16 255.0 17 620.0 18 1450.0 19 2680.0 20 4293.0 21 6901.0 22 10100.0 23 14690.0 24 20645.0 25 29260.0 26 39659.0 27 46233.0 28 49517.0 29 53465.0 30 60117.0 31 70579.0 32 83871.0 33 104650.0 34 155104.0 35 186771.0 36 176642.0 37 216600.0 38 292581.0 39 397342.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.57350034555445 23.01466741557381 26.922520220739887 18.48931201813185 2 33.65043326451884 24.45848727672959 28.55208486165225 13.338994597099319 3 28.38679176775184 25.6806978075694 33.19175233897632 12.740758085702444 4 25.179483303470906 28.296339988035268 32.3514548114073 14.172721897086523 5 23.01081419939801 31.220980465675996 31.41625948545732 14.351945849468676 6 22.06104581227032 40.02938324335086 27.985662083809427 9.923908860569398 7 86.70511978809287 2.8373009109892244 9.103075014708912 1.3545042862089933 8 86.89629859066147 2.411372322941012 9.14407718683603 1.5482518995614745 9 82.3561725312123 4.55687272975172 10.585871639489143 2.5010830995468516 10 41.08970929459962 30.202743391116755 16.688575658640616 12.01897165564301 11 31.22656268911017 24.531599583655055 26.567233929248037 17.674603797986745 12 28.222980680072894 21.07215246089603 31.73311241560592 18.971754443425155 13 23.869883805772215 23.835204860190004 32.517587708833204 19.77732362520458 14 21.425759145336894 24.89395010480254 33.47185151483266 20.20843923502791 15 21.220797684908682 22.864046183265877 36.31023923038429 19.604916901441154 16 24.969927623756163 22.288928968923813 33.08168867692907 19.65945473039096 17 24.504380069387533 22.269168885970984 30.9038311342831 22.322619910358384 18 24.901952938398438 22.856240950499508 32.29084075694949 19.950965354152554 19 26.73094621651222 24.2650360646214 28.62035594825427 20.383661770612115 20 28.168492251330473 24.373321319202898 28.766284160860906 18.691902268605723 21 26.927262640648564 23.964732203945793 29.921211609246335 19.186793546159304 22 26.093930542320415 22.644511661659955 29.88169144334068 21.37986635267895 23 24.791197673447833 23.963200797516947 29.693130851763318 21.552470677271902 24 23.95796437553445 23.50046905496909 32.13508190307383 20.40648466642263 25 24.36190987129764 24.634352015009757 29.78126082173293 21.22247729195967 26 22.72740520964707 25.255707823461442 29.41836689830424 22.59852006858725 27 22.025823464406905 24.823950010942145 30.4194621009019 22.73076442374905 28 21.443197418542763 25.928637448420012 31.08527809599745 21.542887037039783 29 23.16667185368844 23.9735254408598 30.789815455645282 22.069987249806474 30 23.235436942364284 24.61627153910792 31.321905089357564 20.826386429170228 31 25.064578421100215 25.41843210657798 28.63255779947764 20.884431672844162 32 26.243514370273324 24.44351901389282 28.231329315120462 21.08163730071339 33 25.422334722961164 25.564953121673206 27.834151647768618 21.178560507597012 34 23.20762462560818 25.760083940832384 29.724055381584492 21.308236051974948 35 23.614879935265968 26.777036609999687 29.25475341145482 20.35333004327952 36 25.328276728105703 28.04341092623907 26.19362016081743 20.43469218483779 37 24.095889754545187 27.97415183548941 27.3073972364536 20.622561173511805 38 24.53821921144425 27.163840233801302 27.666240342876957 20.63170021187749 39 24.227146105559353 27.013120201078607 26.85039591796206 21.90933777539998 40 25.274183501022335 25.72851720831524 27.752789506210345 21.244509784452077 41 21.812957970797562 26.009456187697076 28.793651875750577 23.38393396575479 42 23.196756579984125 26.410141269773053 27.14141253964984 23.251689610592983 43 22.600594877297294 25.523209946435355 28.60973490366713 23.266460272600227 44 22.93291007235648 25.848757313083198 28.169924857344554 23.048407757215763 45 22.22238688958016 26.639753433684916 27.47506154030835 23.662798136426577 46 23.002119762898765 26.906909755207153 27.456388261917926 22.63458221997616 47 22.36614149306199 26.35980245845072 29.2848381377505 21.989217910736787 48 22.94066590491547 26.007331978779646 29.32722351568432 21.724778600620564 49 23.172698678989054 25.996414532948208 28.78080782183123 22.050078966231503 50 22.06178681538105 26.905971151266893 29.252728002952153 21.7795140303999 51 21.924503639066277 26.540804818298625 28.482430569243526 23.052260973391565 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1621.0 1 2663.0 2 3705.0 3 21319.0 4 38933.0 5 26518.5 6 14104.0 7 13876.0 8 13648.0 9 14094.0 10 14540.0 11 14674.5 12 14809.0 13 14857.5 14 14906.0 15 14263.0 16 13620.0 17 13123.0 18 12626.0 19 12184.5 20 11743.0 21 11587.5 22 11432.0 23 11990.0 24 12548.0 25 13852.5 26 16638.0 27 18119.0 28 21981.0 29 25843.0 30 29252.5 31 32662.0 32 36091.0 33 39520.0 34 46546.5 35 53573.0 36 57224.5 37 60876.0 38 66960.0 39 73044.0 40 79169.0 41 85294.0 42 92950.0 43 100606.0 44 102975.0 45 105344.0 46 109948.5 47 114553.0 48 117784.0 49 121015.0 50 123758.5 51 126502.0 52 128340.5 53 130179.0 54 125392.5 55 120606.0 56 118492.0 57 116378.0 58 111888.0 59 107398.0 60 102334.5 61 97271.0 62 89426.0 63 81581.0 64 73283.5 65 64986.0 66 56887.0 67 48788.0 68 41705.5 69 34623.0 70 29716.5 71 24810.0 72 21233.0 73 17656.0 74 15088.0 75 10420.0 76 8320.0 77 6259.0 78 4198.0 79 3404.5 80 2611.0 81 1841.0 82 1071.0 83 768.5 84 466.0 85 358.0 86 250.0 87 189.0 88 128.0 89 89.5 90 51.0 91 40.5 92 30.0 93 19.5 94 9.0 95 7.0 96 5.0 97 5.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2024283.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.886709908049333 #Duplication Level Percentage of deduplicated Percentage of total 1 77.31362453894474 19.24081745840562 2 5.400286964047082 2.687907501889203 3 2.1778067012924867 1.6259533083261588 4 1.3513016822870068 1.3451781186134315 5 1.0301619962444248 1.2818671379416007 6 0.8512567728280395 1.27109882175802 7 0.7261331891388569 1.2649746222893816 8 0.634058408082731 1.262370213337159 9 0.5707122817093443 1.2782835896275242 >10 9.109385429773997 53.432861826844324 >50 0.7958806383386956 12.333996599042 >100 0.03779175916199085 1.5136736884784847 >500 0.0011997286129441405 0.1966600692214833 >1k 1.999547688240234E-4 0.05249908224409537 >5k 0.0 0.0 >10k+ 1.999547688240234E-4 1.2118579619814736 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24353 1.203043250375565 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.940020738207059E-5 0.0 0.0 0.02262529498098833 0.0 2 4.940020738207059E-5 0.0 0.0 0.06767828411343671 0.0 3 4.940020738207059E-5 0.0 0.0 0.10868045624055529 0.0 4 4.940020738207059E-5 0.0 0.0 0.16751610323260138 0.0 5 4.940020738207059E-5 0.0 0.0 0.28271738684759 0.0 6 4.940020738207059E-5 0.0 0.0 0.5527883206053699 0.0 7 4.940020738207059E-5 0.0 0.0 0.6960489220133746 0.0 8 4.940020738207059E-5 0.0 0.0 0.9507563912753306 0.0 9 4.940020738207059E-5 0.0 0.0 1.110615462363711 0.0 10 4.940020738207059E-5 0.0 0.0 1.3217025485072986 0.0 11 4.940020738207059E-5 0.0 0.0 1.4959864801512437 0.0 12 4.940020738207059E-5 0.0 0.0 1.6366782707753806 0.0 13 4.940020738207059E-5 0.0 0.0 1.7254504434409617 0.0 14 4.940020738207059E-5 0.0 0.0 1.7835450873222767 0.0 15 4.940020738207059E-5 0.0 0.0 1.8270172698184988 0.0 16 4.940020738207059E-5 0.0 0.0 1.8842721101743185 0.0 17 4.940020738207059E-5 0.0 0.0 1.9492333828817414 0.0 18 4.940020738207059E-5 0.0 0.0 2.030595524440012 0.0 19 4.940020738207059E-5 0.0 0.0 2.085627355463638 0.0 20 4.940020738207059E-5 0.0 0.0 2.1424375939530194 0.0 21 4.940020738207059E-5 0.0 0.0 2.2094242751631072 0.0 22 4.940020738207059E-5 0.0 0.0 2.2889092088408587 0.0 23 4.940020738207059E-5 0.0 0.0 2.3691845458367236 0.0 24 4.940020738207059E-5 0.0 0.0 2.44377885898365 0.0 25 4.940020738207059E-5 0.0 0.0 2.509481134801804 0.0 26 4.940020738207059E-5 0.0 0.0 2.573948405435406 0.0 27 4.940020738207059E-5 0.0 0.0 2.6493825221078278 0.0 28 4.940020738207059E-5 0.0 0.0 2.719975418456807 0.0 29 4.940020738207059E-5 0.0 0.0 2.802029162918426 0.0 30 4.940020738207059E-5 0.0 0.0 2.9011753791342416 0.0 31 9.880041476414118E-5 0.0 0.0 2.9844147285730305 0.0 32 9.880041476414118E-5 0.0 0.0 3.0829187420928794 0.0 33 1.4820062214621177E-4 0.0 0.0 3.173172920979922 0.0 34 1.4820062214621177E-4 0.0 0.0 3.264909106088427 0.0 35 1.4820062214621177E-4 0.0 0.0 3.3617829127646677 0.0 36 1.4820062214621177E-4 0.0 0.0 3.4539636997396115 0.0 37 1.4820062214621177E-4 0.0 0.0 3.5538015188587764 0.0 38 1.4820062214621177E-4 0.0 0.0 3.670484808695227 0.0 39 1.4820062214621177E-4 0.0 0.0 3.856723590525633 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 13410 0.0 41.37584 1 TAATGCG 50 1.0822987E-9 40.5 1 GCGTAAG 140 0.0 40.178574 1 ACGTAGG 305 0.0 39.836067 2 AGGGCGA 2155 0.0 39.153133 6 GGGCGAT 4200 0.0 38.94643 7 GGCGATA 875 0.0 38.571426 8 TAGGGCG 790 0.0 38.16456 5 TACGGGA 580 0.0 38.017242 4 TACGAAT 160 0.0 37.968754 12 CACGACC 785 0.0 37.834393 27 TCAAGCG 825 0.0 37.636364 17 ACGGGAT 670 0.0 37.27612 5 TATACGG 145 0.0 37.241383 2 GTACGGG 665 0.0 36.879696 3 GTATCGC 55 2.752131E-9 36.81818 17 TAGGGAT 2405 0.0 36.767155 5 TAAGGGA 2050 0.0 36.658535 4 GCGATAA 160 0.0 36.562504 9 GTTGATC 900 0.0 36.5 16 >>END_MODULE