##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547291_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2733172 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29335951048818 31.0 31.0 33.0 30.0 34.0 2 31.702570127309954 31.0 31.0 34.0 30.0 34.0 3 31.766338525347106 31.0 31.0 34.0 30.0 34.0 4 35.56574997841336 37.0 35.0 37.0 33.0 37.0 5 35.47162271529198 37.0 35.0 37.0 33.0 37.0 6 35.50648038250063 37.0 35.0 37.0 33.0 37.0 7 35.9089808471622 37.0 35.0 37.0 35.0 37.0 8 35.90325453356027 37.0 35.0 37.0 35.0 37.0 9 37.61289446840521 39.0 37.0 39.0 35.0 39.0 10 36.86597440629423 39.0 37.0 39.0 32.0 39.0 11 36.650251795349874 39.0 35.0 39.0 32.0 39.0 12 36.38493186671018 39.0 35.0 39.0 32.0 39.0 13 36.29896106062846 39.0 35.0 39.0 32.0 39.0 14 37.408028839751026 39.0 36.0 41.0 32.0 41.0 15 37.48547621591323 39.0 36.0 41.0 32.0 41.0 16 37.52359492926168 39.0 36.0 41.0 32.0 41.0 17 37.40711378574053 39.0 36.0 41.0 32.0 41.0 18 37.26101686977621 39.0 36.0 41.0 32.0 41.0 19 37.1934459302232 39.0 36.0 41.0 32.0 41.0 20 37.04957975568314 39.0 35.0 41.0 31.0 41.0 21 36.916257008340494 39.0 35.0 41.0 31.0 41.0 22 36.78088901832742 39.0 35.0 41.0 31.0 41.0 23 36.63809705353341 38.0 35.0 40.0 31.0 41.0 24 36.53736244919822 38.0 35.0 40.0 30.0 41.0 25 36.43751728760576 38.0 35.0 40.0 30.0 41.0 26 36.224323972293 38.0 35.0 40.0 30.0 41.0 27 36.22721402092514 38.0 35.0 40.0 30.0 41.0 28 36.25412560936523 38.0 35.0 40.0 30.0 41.0 29 36.239183263987776 38.0 35.0 40.0 30.0 41.0 30 36.18371877071769 38.0 35.0 40.0 30.0 41.0 31 36.09764112906176 38.0 35.0 40.0 30.0 41.0 32 35.92262872589065 38.0 35.0 40.0 29.0 41.0 33 35.722845104515926 38.0 35.0 40.0 27.0 41.0 34 35.47844006890163 38.0 34.0 40.0 26.0 41.0 35 35.314366604077605 38.0 34.0 40.0 25.0 41.0 36 35.08506050844952 38.0 34.0 40.0 24.0 41.0 37 35.04615443155425 38.0 34.0 40.0 24.0 41.0 38 34.93640100220549 38.0 34.0 40.0 24.0 41.0 39 34.801085332353765 38.0 34.0 40.0 24.0 41.0 40 34.68546948380855 38.0 33.0 40.0 23.0 41.0 41 34.66013774471566 38.0 33.0 40.0 23.0 41.0 42 34.57386179867202 38.0 33.0 40.0 23.0 41.0 43 34.44828316695766 37.0 33.0 40.0 23.0 41.0 44 34.35779928961661 37.0 33.0 40.0 23.0 41.0 45 34.18769656648026 37.0 33.0 40.0 23.0 41.0 46 34.07704344988168 37.0 33.0 40.0 23.0 41.0 47 34.03097060850909 37.0 33.0 40.0 23.0 41.0 48 33.90514757212499 37.0 33.0 40.0 22.0 41.0 49 33.76905441735829 36.0 33.0 40.0 21.0 41.0 50 33.65862558229047 36.0 33.0 40.0 21.0 41.0 51 33.178250765045156 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 6.0 13 10.0 14 39.0 15 137.0 16 310.0 17 776.0 18 1750.0 19 3190.0 20 5345.0 21 8308.0 22 12368.0 23 17778.0 24 25355.0 25 35931.0 26 48005.0 27 55868.0 28 60056.0 29 65863.0 30 74996.0 31 88704.0 32 107111.0 33 132838.0 34 194503.0 35 244189.0 36 228875.0 37 284930.0 38 409612.0 39 626107.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.196054986660194 23.47045850023343 26.541651970677293 15.79183454242909 2 34.605176695795215 24.270408155798464 27.305745851340497 13.818669297065828 3 29.085363087284666 25.611633662279576 31.4226107980032 13.880392452432558 4 26.00549837331862 28.232983507807045 30.84050326872952 14.921014850144815 5 23.006345740407117 31.960374246479915 30.12821732404693 14.905062689066037 6 22.266875264344872 40.50696406958655 27.607666111024116 9.61849455504447 7 88.2134018642076 2.9172697510438423 7.661025358082112 1.208303026666452 8 88.36637430794696 2.543967229285241 7.711369793046321 1.3782886697214811 9 83.04175514749895 5.245443755460688 9.379943889371031 2.332857207669331 10 34.27376689063111 35.77100160546062 17.812746508452452 12.14248499545583 11 29.682617852078096 27.277463694198534 27.234144064113053 15.805774389610313 12 26.80369182766397 24.534313976581057 30.68043284506061 17.98156135069436 13 23.397685912192866 27.22250923103266 31.74201989483282 17.637784961941655 14 21.783224765949598 28.74224527398934 31.55085007456538 17.92367988549568 15 21.437070188045247 26.050464442047556 34.838348995233375 17.674116374673822 16 24.1053984161992 25.42115900499493 33.73432041598553 16.73912216282034 17 23.720790349088897 24.565120672976306 30.602428240886415 21.111660737048382 18 24.147400895369923 25.107128274400587 31.175974289214142 19.569496541015347 19 26.494893113203265 26.309284596798154 28.58393105154012 18.611891238458465 20 28.6680823599832 25.91487107287796 28.135880215368807 17.28116635177003 21 26.992520046305174 25.98596063474966 29.67544669709773 17.346072621847437 22 25.502712599133897 24.19485491582674 29.58847814919807 20.713954335841287 23 22.83789677341931 27.958028254350626 29.438761995220208 19.765312977009863 24 22.11573219687601 26.93950472198603 32.465574797341695 18.47918828379626 25 22.523390404994636 27.276183130809184 30.784341417225114 19.416085046971066 26 21.204739401691512 29.094839256365862 29.32256001451793 20.377861327424693 27 21.0384490987029 28.304658470085307 30.724593988230524 19.93229844298127 28 20.441011396282416 28.865033009265424 32.119749507166034 18.57420608728613 29 21.554625907187695 26.838889027108433 31.07272429250702 20.533760773196857 30 22.13644073625809 27.191007371654617 31.427184238679455 19.245367653407836 31 23.667994549922213 27.743698530498627 29.394417914423244 19.193889005155913 32 24.161084629873276 27.128771990932147 29.296399933849752 19.41374344534482 33 23.27299562559546 27.232826913198295 28.730061628027805 20.764115833178444 34 21.394701833620424 28.42429967817613 30.293263651171603 19.887734837031847 35 21.946112429075082 28.12567229577941 29.821467511009185 20.106747764136323 36 23.870177215338074 29.409638324993814 27.59826311699373 19.121921342674373 37 22.7379762415245 29.665311952559154 27.770919649403698 19.82579215651265 38 22.773246616019772 29.61390647935805 27.79532352885219 19.817523375769987 39 22.606809962929518 28.943513251269952 27.681499737301568 20.76817704849896 40 23.37185511925338 28.128196835032703 28.32825742397478 20.171690621739135 41 20.926381508371957 27.96512623428017 28.973222321902902 22.13526993544497 42 22.559355942472703 28.26510735511706 27.818154144708053 21.357382557702188 43 21.969418682761273 27.57748140256083 28.51646365468401 21.936636259993882 44 21.57112688114762 29.326401704685985 28.161381720579605 20.941089693586793 45 21.89265805445102 28.902974273115632 27.618422843494667 21.585944828938683 46 22.401700295480858 28.89902282037135 28.053704633297865 20.645572250849927 47 21.815860838615354 28.23799599878822 29.25227537820525 20.693867784391177 48 22.344148118010867 27.999225807962326 29.17288044806547 20.483745625961337 49 21.960418151510407 28.637861063994507 29.036848028590956 20.36487275590413 50 21.380579048812148 29.206614146493525 28.753184944086946 20.659621860607384 51 21.556272345831143 28.808175994778228 28.283657230499948 21.35189442889068 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2153.0 1 3280.5 2 4408.0 3 20552.0 4 36696.0 5 26046.0 6 15396.0 7 15432.5 8 15469.0 9 16285.0 10 17101.0 11 17764.5 12 18428.0 13 18792.5 14 19157.0 15 18908.0 16 18659.0 17 17619.5 18 16580.0 19 16100.5 20 15621.0 21 16048.0 22 16475.0 23 18041.0 24 19607.0 25 22820.0 26 30434.5 27 34836.0 28 39315.0 29 43794.0 30 50700.5 31 57607.0 32 68464.5 33 79322.0 34 86003.0 35 92684.0 36 100681.0 37 108678.0 38 118182.0 39 127686.0 40 138938.0 41 150190.0 42 163395.0 43 176600.0 44 177922.5 45 179245.0 46 182458.0 47 185671.0 48 185563.0 49 185455.0 50 185098.0 51 184741.0 52 174851.5 53 164962.0 54 154316.0 55 143670.0 56 132323.0 57 120976.0 58 114550.0 59 108124.0 60 99616.5 61 91109.0 62 82443.0 63 73777.0 64 63053.0 65 52329.0 66 45503.5 67 38678.0 68 33726.5 69 28775.0 70 24775.5 71 20776.0 72 18217.5 73 15659.0 74 13507.5 75 9391.0 76 7426.0 77 5399.5 78 3373.0 79 2725.5 80 2078.0 81 1543.5 82 1009.0 83 705.5 84 402.0 85 340.5 86 279.0 87 168.5 88 58.0 89 48.5 90 39.0 91 26.0 92 13.0 93 10.0 94 7.0 95 6.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2733172.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.300029431793075 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41091651268279 17.12754888357599 2 5.600160715882464 2.3856717614213574 3 1.9953714677520107 1.2750441297143393 4 1.1374249534492655 0.9690873993970092 5 0.7776850812476458 0.8282357559620621 6 0.5866260905008618 0.7497091795875638 7 0.4669829819388229 0.6962725881610395 8 0.40324056005215486 0.6871228637762896 9 0.3412891756354382 0.6542522537208506 >10 5.84843020668146 31.485653460851122 >50 1.960135115918189 29.158772858684923 >100 0.4696537067212671 12.816693130139372 >500 0.001562573653220726 0.2340894824473861 >1k 3.472385896046058E-4 0.09374673586163093 >5k 0.0 0.0 >10k+ 1.736192948023029E-4 0.8380995166990696 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22663 0.8291830883676549 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.097625762301092E-4 0.0 0.0 0.014891122841884813 0.0 2 1.097625762301092E-4 0.0 0.0 0.041526841340391314 0.0 3 1.097625762301092E-4 0.0 0.0 0.07054074899055017 0.0 4 1.097625762301092E-4 0.0 0.0 0.12560497473265494 0.0 5 1.097625762301092E-4 0.0 0.0 0.21561028724134448 0.0 6 1.097625762301092E-4 0.0 0.0 0.44044063088601815 0.0 7 1.097625762301092E-4 0.0 0.0 0.5504227322685875 0.0 8 1.097625762301092E-4 0.0 0.0 0.7644231683918904 0.0 9 1.097625762301092E-4 0.0 0.0 0.8690634910645946 0.0 10 1.097625762301092E-4 0.0 0.0 1.0219627597531367 0.0 11 1.097625762301092E-4 0.0 0.0 1.156824378414531 0.0 12 1.097625762301092E-4 0.0 0.0 1.2694041941012129 0.0 13 1.097625762301092E-4 0.0 0.0 1.3396156553630727 0.0 14 1.097625762301092E-4 0.0 0.0 1.380996146601824 0.0 15 1.097625762301092E-4 0.0 0.0 1.4179495472659607 0.0 16 1.097625762301092E-4 0.0 0.0 1.474550449075287 0.0 17 1.097625762301092E-4 0.0 0.0 1.5368224173231688 0.0 18 1.097625762301092E-4 0.0 0.0 1.615302659327697 0.0 19 1.097625762301092E-4 0.0 0.0 1.66868385890094 0.0 20 1.097625762301092E-4 0.0 0.0 1.7222114085758233 0.0 21 1.097625762301092E-4 0.0 0.0 1.7917277068548925 0.0 22 1.097625762301092E-4 0.0 0.0 1.8643539447938147 0.0 23 1.097625762301092E-4 0.0 0.0 1.947078339745907 0.0 24 1.4635010164014558E-4 0.0 0.0 2.016558050499566 0.0 25 1.4635010164014558E-4 0.0 0.0 2.08069598254336 0.0 26 1.4635010164014558E-4 0.0 0.0 2.14102881194451 0.0 27 1.4635010164014558E-4 0.0 0.0 2.2068131826317554 0.0 28 1.4635010164014558E-4 0.0 0.0 2.2762197183345942 0.0 29 1.8293762705018197E-4 0.0 0.0 2.350931445221889 0.0 30 1.8293762705018197E-4 0.0 0.0 2.4451443231527326 0.0 31 1.8293762705018197E-4 0.0 0.0 2.532222633628619 0.0 32 1.8293762705018197E-4 0.0 0.0 2.627459962270944 0.0 33 1.8293762705018197E-4 0.0 0.0 2.712782071527149 0.0 34 1.8293762705018197E-4 0.0 0.0 2.8040679474251893 0.0 35 1.8293762705018197E-4 0.0 0.0 2.901939577897037 0.0 36 1.8293762705018197E-4 0.0 0.0 2.993444978947538 0.0 37 1.8293762705018197E-4 0.0 0.0 3.0834868789816374 0.0 38 1.8293762705018197E-4 0.0 0.0 3.2041891253093477 0.0 39 1.8293762705018197E-4 0.0 0.0 3.3468804744084895 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14925 0.0 41.351757 1 TACGGGA 1000 0.0 40.95 4 CGTAAGG 410 0.0 40.609753 2 AGGGCGA 3490 0.0 39.777935 6 CGCGTAA 40 3.4605546E-7 39.375 31 ATAGTCG 75 0.0 39.0 1 ACGGGAT 1100 0.0 38.863636 5 GCGAGAC 2025 0.0 38.666668 21 TCGACGC 35 6.25145E-6 38.571426 36 GACACGA 2020 0.0 38.5396 25 CACGACC 2050 0.0 38.195126 27 ACACGAC 2045 0.0 38.06846 26 TCAAGCG 2040 0.0 38.05147 17 CACGTGA 1880 0.0 37.81915 43 GGGCGAT 6920 0.0 37.814304 7 CGTTAGG 460 0.0 37.663044 2 AACGGGA 1190 0.0 37.62605 4 AACACGT 1910 0.0 37.578533 41 CGACCAA 2075 0.0 37.30121 29 TAAGGGA 3525 0.0 37.021275 4 >>END_MODULE