##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547290_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1449661 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.900358083717503 31.0 31.0 34.0 30.0 34.0 2 32.31664644354784 33.0 31.0 34.0 31.0 34.0 3 32.4372222195396 34.0 31.0 34.0 30.0 34.0 4 35.99828097741472 37.0 35.0 37.0 35.0 37.0 5 35.94622397926136 37.0 35.0 37.0 35.0 37.0 6 35.99821751430162 37.0 35.0 37.0 35.0 37.0 7 36.21589944131766 37.0 35.0 37.0 35.0 37.0 8 36.16947755371773 37.0 36.0 37.0 35.0 37.0 9 37.88360658112483 39.0 38.0 39.0 35.0 39.0 10-11 37.523902484787826 39.0 37.0 39.0 35.0 39.0 12-13 36.75646789145876 39.0 35.0 39.0 33.0 39.0 14-15 37.7957470746609 40.0 35.0 41.0 33.0 41.0 16-17 37.96997642897202 40.0 35.0 41.0 33.0 41.0 18-19 37.82216945892867 40.0 36.0 41.0 33.5 41.0 20-21 37.57765332722616 40.0 35.0 41.0 33.0 41.0 22-23 37.38169165066867 39.0 35.0 41.0 33.0 41.0 24-25 37.38114083223595 39.0 35.0 41.0 33.0 41.0 26-27 37.349777292760166 39.0 35.0 41.0 33.0 41.0 28-29 37.23090053467673 39.0 35.0 41.0 33.0 41.0 30-31 37.07261145881692 39.0 35.0 41.0 32.5 41.0 32-33 36.691460624242495 39.0 35.0 41.0 31.5 41.0 34-35 36.312720353241204 39.0 35.0 41.0 30.0 41.0 36-37 36.107439601396464 39.0 35.0 41.0 30.0 41.0 38-39 35.99765910788798 39.0 35.0 41.0 30.0 41.0 40-41 35.8728371667583 38.5 35.0 41.0 29.0 41.0 42-43 35.84085451702157 38.0 35.0 41.0 29.0 41.0 44-45 35.764562887461274 38.0 35.0 41.0 29.0 41.0 46-47 35.62820687043384 38.0 35.0 40.5 29.0 41.0 48-49 35.54700857648788 38.0 35.0 40.0 28.0 41.0 50-51 35.31349570692734 37.5 35.0 40.0 27.5 41.0 52-53 35.09424237804562 37.0 34.5 40.0 27.0 41.0 54-55 34.93769612343851 37.0 34.0 40.0 26.5 41.0 56-57 34.67205022415585 36.0 34.0 40.0 26.0 41.0 58-59 34.40333084769473 36.0 34.0 40.0 25.5 41.0 60-61 34.01951145819609 35.0 34.0 39.0 25.0 41.0 62-63 33.51701432265888 35.0 33.0 39.0 23.0 40.0 64-65 33.01734543455332 35.0 33.0 38.0 21.0 40.0 66-67 32.64172761769821 35.0 33.0 37.5 19.5 40.0 68-69 32.078388671558386 35.0 32.0 37.0 17.5 39.5 70-71 31.68553061715808 35.0 32.0 36.0 16.0 39.0 72-73 31.40485568695026 35.0 31.5 36.0 13.0 38.5 74-75 31.091443102904748 35.0 31.0 35.5 12.5 37.5 76-77 29.22766874462374 33.0 28.0 34.5 10.5 35.5 78-79 30.194460635969374 34.0 30.0 35.0 10.5 36.0 80-81 30.308423831502676 34.0 31.0 35.0 10.0 36.0 82-83 30.110010202385247 34.0 30.5 35.0 10.0 36.0 84-85 29.87547605957531 34.0 30.0 35.0 10.0 36.0 86 29.437478831257792 34.0 29.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 5.0 10 12.0 11 17.0 12 41.0 13 93.0 14 261.0 15 767.0 16 1883.0 17 4106.0 18 8055.0 19 13268.0 20 15484.0 21 15972.0 22 14290.0 23 12764.0 24 12640.0 25 14023.0 26 16374.0 27 20076.0 28 24886.0 29 31033.0 30 38616.0 31 46757.0 32 54272.0 33 66546.0 34 160002.0 35 142039.0 36 119623.0 37 205269.0 38 284151.0 39 125981.0 40 354.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.782227707029435 22.822025287291307 27.473112679447127 13.922634326232133 2 31.280485575593193 26.583801316307742 28.24287885236617 13.892834255732891 3 28.44044228271299 25.99511196065839 31.5368213672024 14.027624389426219 4 25.932338664004895 26.0049763358468 33.288679215347585 14.774005784800723 5 26.876973306172964 29.27394749531097 28.988777376227958 14.860301822288108 6 22.546995469975396 40.42427850373294 26.64181487947872 10.386911146812945 7 81.76021842347969 4.399511334029128 11.153021292564262 2.687248949926914 8 81.36171146219702 6.219040175599674 9.19870231730039 3.2205460449029117 9 76.819063215469 6.315890404722207 10.486313696788422 6.378732683020375 10-11 40.70751713676508 25.742225251282886 21.436115064142584 12.114142547809454 12-13 30.609983989360273 23.531708447699152 28.425818174042067 17.43248938889851 14-15 16.63019837051559 29.79506933000198 35.52358103032364 18.051151269158787 16-17 22.81961092972771 25.662723905795907 31.608010424506144 19.909654739970243 18-19 23.64601103292425 26.97644483779311 29.567498884221898 19.810045245060742 20-21 26.306908994585633 28.210940350882037 29.400114923420027 16.08203573111231 22-23 22.158870246216182 24.518008003250415 31.608286351084843 21.71483539944856 24-25 20.726052504689026 27.22426139628506 32.36208327326182 19.687602825764092 26-27 18.8365072937742 31.51053936058154 29.281018113890074 20.371935231754183 28-29 17.53658269071183 28.59544403829585 32.929284846595166 20.938688424397153 30-31 21.673722339222756 28.62251933383046 29.3266149810197 20.37714334592708 32-33 26.058644055403295 27.66922749525579 27.407269699605628 18.864858749735284 34-35 20.440675440671992 28.61199963301765 29.08414449999 21.863180426320362 36-37 22.378887201904448 30.297980010499003 27.80132734480682 19.521805442789727 38-39 20.406529526558277 31.00176524028721 27.154693407631164 21.437011825523346 40-41 21.042402327164762 26.440767876075853 28.12095379540458 24.3958760013548 42-43 20.762957684589708 26.025394902670346 28.676083580919954 24.53556383181999 44-45 19.65628515908202 29.239318709684543 27.308005112919503 23.796391018313937 46-47 20.716257111145296 29.466268320662554 28.109571824033342 21.707902744158808 48-49 21.16336164110092 25.98317813612976 31.073713095682372 21.779747127086953 50-51 19.17662129284019 28.749790468254304 28.758033774792864 23.315554464112644 52-53 21.47850428479486 25.442293060239603 30.527274997395942 22.5519276575696 54-55 20.93172127828506 25.46505700298208 31.679406426743906 21.923815291988955 56-57 22.152179026682788 25.372828544052712 29.399218162039265 23.075774267225235 58-59 22.58038258599769 29.1678537258021 27.370364519704953 20.881399168495253 60-61 23.133718848751535 30.01163720345653 26.226648851007234 20.627995096784694 62-63 21.707833762514134 27.836197566189615 29.584951240324465 20.87101743097179 64-65 19.647869398431773 31.563275827934945 28.16082518602625 20.62802958760703 66-67 19.587338005230187 31.122517609289346 25.544558348469053 23.745586037011414 68-69 18.049564691331284 32.88406737851125 25.744087755689087 23.322280174468375 70-71 18.77228538258255 31.189567767912635 28.099017632398194 21.939129217106622 72-73 20.78361768716962 31.891145585071268 26.390204330529688 20.93503239722942 74-75 19.432853611982388 32.78259537919555 25.276840585488607 22.507710423333453 76-77 22.28051937659908 29.748403247379905 26.059954706652107 21.911122669368908 78-79 18.872860620517486 30.732184972900562 27.47007748708146 22.924876919500488 80-81 17.281488568706752 30.253521340506506 28.663390958299907 23.801599132486835 82-83 18.21367202401113 30.09676055298446 28.884028748790236 22.80553867421418 84-85 17.592699258654264 29.752059274547637 27.694026396516154 24.96121507028195 86 18.135688274706983 30.345508363679507 28.148236035873214 23.370567325740293 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 531.0 1 812.5 2 3376.0 3 3778.5 4 2054.0 5 2646.0 6 3488.5 7 3894.0 8 3968.0 9 4032.5 10 3865.5 11 3705.0 12 3642.0 13 3567.0 14 3552.0 15 3645.5 16 4048.5 17 4177.5 18 3992.0 19 3993.0 20 4027.5 21 4056.0 22 4670.0 23 5719.0 24 6237.5 25 7122.0 26 9258.0 27 11819.5 28 13173.0 29 13300.0 30 16115.0 31 20404.0 32 22694.5 33 24717.5 34 28603.5 35 33704.0 36 36125.0 37 38597.0 38 42707.5 39 47853.0 40 53628.5 41 63231.5 42 69564.5 43 68563.0 44 72193.0 45 75259.5 46 75648.5 47 76371.0 48 74561.0 49 66516.5 50 60052.0 51 55582.5 52 50258.0 53 48627.5 54 45508.0 55 41937.0 56 38933.0 57 37156.0 58 34245.0 59 27287.0 60 20335.5 61 15988.5 62 13491.0 63 10278.5 64 8121.0 65 6959.5 66 4868.0 67 3538.5 68 2591.5 69 1799.5 70 1317.0 71 1079.0 72 962.5 73 647.5 74 371.5 75 208.5 76 132.5 77 90.5 78 49.5 79 60.0 80 54.5 81 51.5 82 45.5 83 23.5 84 6.0 85 2.0 86 2.0 87 3.0 88 4.5 89 3.0 90 1.5 91 1.5 92 0.5 93 0.0 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1449661.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.097053167800155 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3812477834362 16.747104050134716 2 8.160808379986193 3.4433801656959555 3 2.7073232059900576 1.7134962485757428 4 1.3671457173222845 1.1537098354591406 5 0.8566961204351966 0.9036881800734734 6 0.5428203525873201 0.6871145903459231 7 0.4153535265060543 0.6133914802492064 8 0.34501326713498104 0.5823010592274507 9 0.2666990020122479 0.5063906722726471 >10 3.429072297773126 17.93211848342872 >50 1.4869143556524997 22.918408395820702 >100 1.0336430885931291 29.881825053528754 >500 0.003301319350345137 0.5090580349529905 >1k 0.003301319350345137 1.209160835246801 >5k 6.602638700690274E-4 1.1988529149877993 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9465 0.6529112668410063 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCC 7748 0.5344697829354588 No Hit GAATCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTT 4539 0.3131076851760515 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATG 2390 0.16486613077126308 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTC 1582 0.1091289618745348 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.898164467416864E-5 0.0 0.0 0.09816088037134199 0.0 2 6.898164467416864E-5 0.0 0.0 0.36360224907754296 0.0 3 6.898164467416864E-5 0.0 0.0 0.5239155913003108 0.0 4 6.898164467416864E-5 0.0 0.0 0.8778604101234703 0.0 5 6.898164467416864E-5 0.0 0.0 1.8063533474377802 0.0 6 6.898164467416864E-5 0.0 0.0 2.260804422551203 0.0 7 6.898164467416864E-5 0.0 0.0 2.6617947230421457 0.0 8 6.898164467416864E-5 0.0 0.0 3.278214699850517 0.0 9 6.898164467416864E-5 0.0 0.0 3.4384590604286105 0.0 10 6.898164467416864E-5 0.0 0.0 4.268860099016253 0.0 11 6.898164467416864E-5 0.0 0.0 4.780221030985865 0.0 12 6.898164467416864E-5 0.0 0.0 5.318622767667751 0.0 13 6.898164467416864E-5 0.0 0.0 5.468588863189394 0.0 14 6.898164467416864E-5 0.0 0.0 5.542123296412058 0.0 15 6.898164467416864E-5 0.0 0.0 5.691192630552936 0.0 16 6.898164467416864E-5 0.0 0.0 5.897792656352071 0.0 17 6.898164467416864E-5 0.0 0.0 6.117913084507343 0.0 18 6.898164467416864E-5 0.0 0.0 6.371282665395565 0.0 19 6.898164467416864E-5 0.0 0.0 6.6152017609634255 0.0 20 6.898164467416864E-5 0.0 0.0 6.816697145056672 0.0 21 6.898164467416864E-5 0.0 0.0 7.056546323588757 0.0 22 6.898164467416864E-5 0.0 0.0 7.334266425046959 0.0 23 6.898164467416864E-5 0.0 0.0 7.588532767315945 0.0 24 6.898164467416864E-5 0.0 0.0 7.780646647733505 0.0 25 6.898164467416864E-5 0.0 0.0 7.953997520799691 0.0 26 6.898164467416864E-5 0.0 0.0 8.12824515524664 0.0 27 6.898164467416864E-5 0.0 0.0 8.34602020748299 0.0 28 6.898164467416864E-5 0.0 0.0 8.528752584224863 0.0 29 6.898164467416864E-5 0.0 0.0 8.763635084340407 0.0 30 6.898164467416864E-5 0.0 0.0 9.000518052151502 0.0 31 6.898164467416864E-5 0.0 0.0 9.227191736550822 0.0 32 6.898164467416864E-5 0.0 0.0 9.414752828419886 0.0 33 6.898164467416864E-5 0.0 0.0 9.612316258766704 0.0 34 6.898164467416864E-5 0.0 0.0 9.821882495286829 0.0 35 6.898164467416864E-5 0.0 0.0 10.050487665737023 0.0 36 1.379632893483373E-4 0.0 0.0 10.263365021201508 0.0 37 1.379632893483373E-4 0.0 0.0 10.485623880341679 0.0 38 1.379632893483373E-4 0.0 0.0 10.736786048600328 0.0 39 1.379632893483373E-4 0.0 0.0 11.142880990797158 0.0 40 1.379632893483373E-4 0.0 0.0 11.396112608396033 0.0 41 1.379632893483373E-4 0.0 0.0 11.660726197366143 0.0 42 1.379632893483373E-4 0.0 0.0 11.921752740813197 0.0 43 1.379632893483373E-4 0.0 0.0 12.134147224764963 0.0 44 1.379632893483373E-4 0.0 0.0 12.35419867127556 0.0 45 1.379632893483373E-4 0.0 0.0 12.565282503978516 0.0 46 1.379632893483373E-4 0.0 0.0 12.80713215020615 0.0 47 1.379632893483373E-4 0.0 0.0 13.0561558874799 0.0 48 1.379632893483373E-4 0.0 0.0 13.28434716806205 0.0 49 1.379632893483373E-4 0.0 0.0 13.526541722513057 0.0 50 1.379632893483373E-4 0.0 0.0 13.763493671968826 0.0 51 2.0694493402250596E-4 0.0 0.0 14.004101648592327 0.0 52 2.0694493402250596E-4 0.0 0.0 14.31989961791067 0.0 53 2.0694493402250596E-4 0.0 0.0 14.565060383082665 0.0 54 2.0694493402250596E-4 0.0 0.0 14.819671633575021 0.0 55 2.0694493402250596E-4 0.0 0.0 15.06469443545767 0.0 56 2.0694493402250596E-4 0.0 0.0 15.325445052326026 0.0 57 2.0694493402250596E-4 0.0 0.0 15.589644751428093 0.0 58 2.0694493402250596E-4 0.0 0.0 15.824941141411681 0.0 59 2.759265786966746E-4 0.0 0.0 16.064100503497023 0.0 60 2.759265786966746E-4 0.0 0.0 16.33243910127954 0.0 61 2.759265786966746E-4 0.0 0.0 16.608158735042192 0.0 62 2.759265786966746E-4 0.0 0.0 16.939960445924942 0.0 63 2.759265786966746E-4 0.0 0.0 17.268795946086705 0.0 64 2.759265786966746E-4 0.0 0.0 17.559208670164956 0.0 65 2.759265786966746E-4 0.0 0.0 17.83230700142999 0.0 66 2.759265786966746E-4 0.0 0.0 18.085745563962885 0.0 67 2.759265786966746E-4 0.0 0.0 18.34594432767385 0.0 68 3.4490822337084325E-4 0.0 0.0 18.654982095814123 0.0 69 3.4490822337084325E-4 0.0 0.0 19.101086391921974 0.0 70 3.4490822337084325E-4 0.0 0.0 19.389222721725975 0.0 71 3.4490822337084325E-4 0.0 0.0 19.667839584564945 0.0 72 3.4490822337084325E-4 0.0 0.0 19.936936980438876 0.0 73 3.4490822337084325E-4 0.0 0.0 20.198239450464627 0.0 74 3.4490822337084325E-4 0.0 0.0 20.50741518189425 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 5350 0.0 70.80374 1 ATTGCGG 215 0.0 70.69767 2 ACGGGAT 510 0.0 69.803925 5 TAGGGTA 525 0.0 67.809525 5 CGATAGG 320 0.0 67.5 2 GGGCGAT 680 0.0 67.05882 7 GTAGGGT 585 0.0 66.32479 4 CGAGGGA 1010 0.0 66.13861 4 GCTAGCG 130 0.0 64.61539 1 CGTAAGG 205 0.0 64.39024 2 TAGGGAC 1275 0.0 64.0 5 GCGATAA 75 0.0 64.0 9 GTACGTA 25 1.2356351E-4 64.0 8 TGCGTAG 100 0.0 64.0 1 GATACCT 1035 0.0 63.38164 5 TACGGGA 535 0.0 62.803738 4 TACGCGG 115 0.0 62.608692 2 CGGGATC 485 0.0 61.85567 6 GGGACCG 455 0.0 60.65934 7 ATAGCGG 330 0.0 60.60606 2 >>END_MODULE