##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547289_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2110197 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0086939750175 33.0 31.0 34.0 31.0 34.0 2 32.43654218065896 34.0 31.0 34.0 31.0 34.0 3 32.53341275719755 34.0 31.0 34.0 31.0 34.0 4 36.065687705934565 37.0 35.0 37.0 35.0 37.0 5 36.02410533234575 37.0 35.0 37.0 35.0 37.0 6 36.080201990619834 37.0 35.0 37.0 35.0 37.0 7 36.343797285277155 37.0 37.0 37.0 35.0 37.0 8 36.34676193739258 37.0 37.0 37.0 35.0 37.0 9 38.15769475551335 39.0 39.0 39.0 37.0 39.0 10-11 37.63669766377262 39.0 37.5 39.0 35.0 39.0 12-13 36.88364356503208 39.0 35.0 39.0 33.5 39.0 14-15 37.95548022293653 40.0 36.0 41.0 33.0 41.0 16-17 38.1824448143941 40.0 36.0 41.0 34.0 41.0 18-19 38.06461410948836 40.0 36.0 41.0 34.0 41.0 20-21 37.87434277463194 40.0 35.0 41.0 34.0 41.0 22-23 37.68979033711071 40.0 35.0 41.0 33.0 41.0 24-25 37.66147828851998 40.0 35.0 41.0 34.0 41.0 26-27 37.65352050069259 40.0 35.0 41.0 34.0 41.0 28-29 37.59519490360378 40.0 35.0 41.0 33.5 41.0 30-31 37.442920968990094 40.0 35.0 41.0 33.0 41.0 32-33 37.1399236658947 40.0 35.0 41.0 33.0 41.0 34-35 36.84247655550643 40.0 35.0 41.0 31.5 41.0 36-37 36.654967521989654 39.0 35.0 41.0 31.0 41.0 38-39 36.56394521459371 39.0 35.0 41.0 31.0 41.0 40-41 36.42864765706709 39.0 35.0 41.0 31.0 41.0 42-43 36.3944238381535 39.0 35.0 41.0 31.0 41.0 44-45 36.26770273107203 39.0 35.0 41.0 30.5 41.0 46-47 36.15062622115376 38.5 35.0 41.0 30.0 41.0 48-49 36.05955036425509 38.0 35.0 40.5 30.0 41.0 50-51 35.8410634173018 38.0 35.0 40.0 29.5 41.0 52-53 35.645435710504756 37.5 35.0 40.0 29.0 41.0 54-55 35.44727909289986 37.0 35.0 40.0 29.0 41.0 56-57 35.157021832558755 37.0 34.5 40.0 28.5 41.0 58-59 34.87534031182871 36.0 34.0 40.0 28.0 41.0 60-61 34.493833751066845 36.0 34.0 39.0 26.5 41.0 62-63 34.07550527273047 35.0 33.5 39.0 26.0 40.0 64-65 33.66637972663216 35.0 33.0 38.5 25.5 40.0 66-67 33.33637665108992 35.0 33.0 37.5 24.5 40.0 68-69 32.847417089494485 35.0 33.0 37.0 22.5 39.5 70-71 32.51367242015793 35.0 33.0 36.5 21.5 39.0 72-73 32.2422408903055 35.0 33.0 36.0 20.0 39.0 74-75 31.953817345015654 35.0 32.5 35.5 20.0 37.5 76-77 30.022663523832136 33.0 29.5 34.5 17.5 36.0 78-79 31.029552927996768 34.0 31.0 35.0 18.0 36.0 80-81 31.174092276692647 35.0 32.0 35.0 18.0 36.0 82-83 30.969426077280936 34.5 32.0 35.0 16.0 36.0 84-85 30.73688309669666 34.0 31.0 35.0 15.0 36.0 86 30.332663253715175 34.0 31.0 35.0 12.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 5.0 11 7.0 12 30.0 13 68.0 14 245.0 15 763.0 16 1892.0 17 4434.0 18 9710.0 19 15210.0 20 17794.0 21 18020.0 22 16182.0 23 14329.0 24 14421.0 25 16343.0 26 19531.0 27 24238.0 28 29722.0 29 37601.0 30 48247.0 31 60341.0 32 71904.0 33 90987.0 34 227548.0 35 211259.0 36 174413.0 37 321300.0 38 465665.0 39 197576.0 40 407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.450994385832225 24.199825893032738 32.031748694553166 14.317431026581879 2 30.96118514053427 24.823464349537034 30.914886145701086 13.300464364227604 3 28.792193335503747 24.533207089195937 33.40157340760128 13.273026167699035 4 26.114623421415157 27.346830651356246 32.67467444982625 13.863871477402348 5 23.86876675495226 31.33437304668711 30.939196672159046 13.857663526201582 6 22.971551945150146 39.12023379807667 27.368961286552867 10.539252970220316 7 88.61627611071383 3.0177277287381226 6.912766912283545 1.4532292482644986 8 89.43890072822585 2.1463398914888043 6.634688609641659 1.7800707706436887 9 85.30435783957611 4.675345477223217 7.619904681885151 2.400392001315517 10-11 39.782470546588776 27.34988723801617 20.425723285551065 12.441918929843991 12-13 29.927821904779506 24.580051056844457 28.35282677399314 17.139300264382896 14-15 16.191402982754692 30.437821682051485 35.4377103180414 17.933065017152426 16-17 22.044576880736727 26.407439684541302 31.781487699963556 19.76649573475841 18-19 23.829670879069585 27.685874825904882 29.947298759310147 18.537155535715385 20-21 25.38871963138987 28.085861177890024 30.002032985545902 16.52338620517421 22-23 21.28187557844125 24.190442882820893 32.495662727224044 22.032018811513808 24-25 19.76483712184218 26.87597413890741 34.241068487918426 19.118120251331984 26-27 18.560423505483136 32.55565712585128 29.692369954084857 19.191549414580724 28-29 16.95062119792607 27.909550624894266 34.929582403917735 20.210245773261928 30-31 22.038984985761992 27.687865161404364 31.02523129357117 19.247918559262477 32-33 24.372913998076957 28.311551006849122 28.899647758005532 18.415887237068386 34-35 19.38868740691035 28.580980827856354 30.787172951151003 21.243158814082285 36-37 21.964608043703976 29.258974399072695 29.725139406415607 19.051278150807722 38-39 20.081892828015583 30.100625676180943 28.79010822212334 21.027373273680137 40-41 20.68657570833434 27.370975316522582 28.834985548742605 23.107463426400475 42-43 20.5531047575179 26.80526983973534 29.01698277459403 23.624642628152728 44-45 19.683730950238296 30.135124824838627 28.320412738715866 21.860731486207214 46-47 20.963492981934863 28.738454277017738 28.88116607122463 21.41688666982277 48-49 20.8516787769104 27.338324336542986 30.610933481565937 21.199063404980674 50-51 19.019195838113692 29.979215210712557 29.028308731364895 21.97328021980886 52-53 21.206645635454887 26.547545087022677 30.943129954217547 21.302679323304886 54-55 21.13063377495087 26.92476105311495 31.14910598394368 20.795499187990504 56-57 21.205958495818162 25.97233812767244 30.1732492274418 22.648454149067597 58-59 22.96790299673443 27.90651773270458 28.603206240933904 20.52237302962709 60-61 22.93646043473666 29.033189792232665 27.469188895633916 20.561160877396755 62-63 21.576895427298968 26.825978806718048 30.721776213310893 20.875349552672095 64-65 19.282583569211784 30.37154824881279 29.744853205648575 20.601014976326855 66-67 18.98161640832586 29.291246267528575 27.016103235859024 24.711034088286542 68-69 18.067886552772087 31.324421369189704 27.047806437029337 23.559885641008872 70-71 19.19391886160392 30.004852627503496 29.184573762544446 21.61665474834814 72-73 21.34158564342571 29.877305294245037 27.845338610565744 20.935770451763506 74-75 20.389826163149696 31.068260451512348 26.514396523168216 22.02751686216974 76-77 23.06322585047747 28.892231388822935 27.400474931961327 20.64406782873826 78-79 18.52997611123511 30.317738106916085 29.294989993825222 21.85729578802358 80-81 17.343451819901176 29.593848346860508 30.34403896887352 22.718660864364796 82-83 18.58101400011468 28.57472548771513 30.525894027903554 22.318366484266637 84-85 17.03805379308188 28.45916755639402 29.552999080180665 24.949779570343434 86 18.297628136140844 28.20608691984682 30.40744537121416 23.08883957279818 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 821.0 1 1078.5 2 4661.0 3 5102.0 4 2570.5 5 3504.5 6 4812.5 7 5539.0 8 5833.0 9 6034.0 10 5667.5 11 5123.5 12 4926.5 13 4898.5 14 4797.0 15 5002.0 16 5239.5 17 5724.5 18 6014.5 19 5815.5 20 6196.0 21 6613.0 22 6782.0 23 7707.5 24 8711.5 25 10218.5 26 12537.0 27 16225.0 28 19449.0 29 20044.0 30 23589.0 31 30127.0 32 35395.0 33 40811.5 34 44314.5 35 49278.0 36 53880.0 37 58434.5 38 67190.5 39 75886.5 40 87970.5 41 98361.0 42 104662.0 43 108162.0 44 111127.5 45 114514.5 46 117416.5 47 117425.0 48 114443.5 49 104631.0 50 95328.0 51 87513.0 52 75016.0 53 66318.0 54 57897.0 55 54427.0 56 50715.0 57 46068.0 58 42394.5 59 33099.5 60 22900.5 61 16606.5 62 12809.5 63 8876.0 64 7023.0 65 5512.5 66 3563.0 67 2442.5 68 1539.0 69 1108.5 70 694.5 71 489.0 72 351.0 73 148.5 74 91.5 75 94.0 76 74.5 77 41.5 78 25.5 79 28.0 80 21.0 81 12.5 82 11.0 83 10.5 84 12.0 85 15.0 86 16.0 87 16.0 88 11.0 89 3.5 90 0.5 91 0.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2110197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.43869581184062 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0654651951758 14.394253661436773 2 9.315176402715238 3.43519408246604 3 3.2147809722140077 1.77829105345042 4 1.571742556707072 1.1592353159058542 5 0.9007033161327257 0.8303897231443721 6 0.6169774579911582 0.6825755802396984 7 0.44495070060992314 0.5743017433868218 8 0.3441831459839999 0.5077030665889045 9 0.27543167445268396 0.4570740775961058 >10 2.566306185436518 10.982687465251665 >50 1.113498763596526 14.977686163303385 >100 1.564576020374489 48.57204724593824 >500 0.0038797553811738706 0.5019556989063475 >1k 0.0020692028699593975 0.48788663181111025 >5k 0.0 0.0 >10k+ 2.586503587449247E-4 0.6587184905742967 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13812 0.6545360456867297 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.477788092770485E-5 0.0 0.0 0.0701356318865016 0.0 2 9.477788092770485E-5 0.0 0.0 0.2584118923493873 0.0 3 9.477788092770485E-5 0.0 0.0 0.3817179154363313 0.0 4 9.477788092770485E-5 0.0 0.0 0.5873859170494509 0.0 5 9.477788092770485E-5 0.0 0.0 1.0456843602753676 0.0 6 9.477788092770485E-5 0.0 0.0 1.3896332901620085 0.0 7 9.477788092770485E-5 0.0 0.0 1.6269571040049815 0.0 8 9.477788092770485E-5 0.0 0.0 2.0739769794005016 0.0 9 9.477788092770485E-5 0.0 0.0 2.210172794293613 0.0 10 9.477788092770485E-5 0.0 0.0 2.471996690356398 0.0 11 9.477788092770485E-5 0.0 0.0 2.9895313091621305 0.0 12 9.477788092770485E-5 0.0 0.0 3.3429580271415418 0.0 13 9.477788092770485E-5 0.0 0.0 3.4650319377764256 0.0 14 9.477788092770485E-5 0.0 0.0 3.5166858828820247 0.0 15 9.477788092770485E-5 0.0 0.0 3.596915359087327 0.0 16 9.477788092770485E-5 0.0 0.0 3.7724913835059 0.0 17 9.477788092770485E-5 0.0 0.0 4.004507636016922 0.0 18 9.477788092770485E-5 0.0 0.0 4.279079157064483 0.0 19 9.477788092770485E-5 0.0 0.0 4.466360249777628 0.0 20 9.477788092770485E-5 0.0 0.0 4.6658676891304465 0.0 21 9.477788092770485E-5 0.0 0.0 4.9250851934677184 0.0 22 9.477788092770485E-5 0.0 0.0 5.199941048158063 0.0 23 9.477788092770485E-5 0.0 0.0 5.483895579417466 0.0 24 9.477788092770485E-5 0.0 0.0 5.691648694410996 0.0 25 9.477788092770485E-5 0.0 0.0 5.881488789909189 0.0 26 9.477788092770485E-5 0.0 0.0 6.062846265064352 0.0 27 1.4216682139155728E-4 0.0 0.0 6.263159316405056 0.0 28 1.4216682139155728E-4 0.0 0.0 6.465652259007097 0.0 29 1.4216682139155728E-4 0.0 0.0 6.722026426916539 0.0 30 1.4216682139155728E-4 0.0 0.0 6.99166949815586 0.0 31 1.4216682139155728E-4 0.0 0.0 7.233921761807073 0.0 32 1.4216682139155728E-4 0.0 0.0 7.442954378193126 0.0 33 1.4216682139155728E-4 0.0 0.0 7.655304220411649 0.0 34 1.4216682139155728E-4 0.0 0.0 7.888410418553339 0.0 35 1.4216682139155728E-4 0.0 0.0 8.154025429853231 0.0 36 1.4216682139155728E-4 0.0 0.0 8.380781509972765 0.0 37 1.4216682139155728E-4 0.0 0.0 8.630094725753093 0.0 38 1.4216682139155728E-4 0.0 0.0 8.90509274726483 0.0 39 1.4216682139155728E-4 0.0 0.0 9.314580581812978 0.0 40 1.4216682139155728E-4 0.0 0.0 9.59569177664455 0.0 41 1.4216682139155728E-4 0.0 0.0 9.864387069074594 0.0 42 1.4216682139155728E-4 0.0 0.0 10.137442144027311 0.0 43 1.4216682139155728E-4 0.0 0.0 10.405995269635962 0.0 44 1.4216682139155728E-4 0.0 0.0 10.658151821844122 0.0 45 1.4216682139155728E-4 0.0 0.0 10.926088891226744 0.0 46 1.4216682139155728E-4 0.0 0.0 11.203551137642599 0.0 47 1.4216682139155728E-4 0.0 0.0 11.502575351969508 0.0 48 1.4216682139155728E-4 0.0 0.0 11.783354824217835 0.0 49 1.4216682139155728E-4 0.0 0.0 12.078682701188562 0.0 50 1.4216682139155728E-4 0.0 0.0 12.372588909945375 0.0 51 1.4216682139155728E-4 0.0 0.0 12.660524112203742 0.0 52 1.4216682139155728E-4 0.0 0.0 13.015372498397069 0.0 53 1.4216682139155728E-4 0.0 0.0 13.328755561684526 0.0 54 1.4216682139155728E-4 0.0 0.0 13.643181181662186 0.0 55 1.4216682139155728E-4 0.0 0.0 13.945190899238318 0.0 56 1.4216682139155728E-4 0.0 0.0 14.250233509004136 0.0 57 1.4216682139155728E-4 0.0 0.0 14.574610806479205 0.0 58 1.4216682139155728E-4 0.0 0.0 14.878705637435747 0.0 59 1.4216682139155728E-4 0.0 0.0 15.197159317352835 0.0 60 1.4216682139155728E-4 0.0 0.0 15.546415808571426 0.0 61 1.4216682139155728E-4 0.0 0.0 15.896335744956513 0.0 62 1.895557618554097E-4 0.0 0.0 16.280280940594647 0.0 63 1.895557618554097E-4 0.0 0.0 16.66474741457788 0.0 64 1.895557618554097E-4 0.0 0.0 17.040257378813447 0.0 65 1.895557618554097E-4 0.0 0.0 17.376576689285407 0.0 66 2.3694470231926213E-4 0.0 0.0 17.682614466800967 0.0 67 2.8433364278311455E-4 0.0 0.0 18.010498545870362 0.0 68 3.31722583246967E-4 0.0 0.0 18.400556914828332 0.0 69 3.31722583246967E-4 0.0 0.0 18.930602213916522 0.0 70 3.31722583246967E-4 0.0 0.0 19.28255987474155 0.0 71 3.31722583246967E-4 0.0 0.0 19.64480093564724 0.0 72 3.31722583246967E-4 0.0 0.0 19.989508088581303 0.0 73 3.791115237108194E-4 0.0 0.0 20.339712358609173 0.0 74 3.791115237108194E-4 0.0 0.0 20.732851008697292 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGCG 15 0.0013099434 80.00001 1 CGTAAGG 440 0.0 78.181816 2 GCGATAT 190 0.0 75.78947 9 TTTAGCG 160 0.0 75.00001 1 CGTTTTT 7520 0.0 72.606384 1 GCGTAAG 205 0.0 72.19512 1 ACGGGTA 120 0.0 70.00001 5 ATCGTAG 115 0.0 69.565216 1 GCGGGAT 1665 0.0 68.46847 5 GGCGATA 410 0.0 68.29269 8 CGTAGGG 1135 0.0 65.19824 3 TTTGCGG 775 0.0 65.03226 2 CGTATGG 225 0.0 64.0 2 ACGGGAC 660 0.0 63.636364 5 TTACGGG 730 0.0 63.561646 3 TTGCGGG 1670 0.0 63.47305 3 CGATAGG 550 0.0 63.272728 2 ACGGGAT 1135 0.0 62.73128 5 AGGGATT 4015 0.0 62.66501 6 GCGGGGT 1015 0.0 62.660095 5 >>END_MODULE