##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547285_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2073453 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02967417153897 33.0 31.0 34.0 31.0 34.0 2 32.43521217987579 34.0 31.0 34.0 31.0 34.0 3 32.534349705539505 34.0 31.0 34.0 31.0 34.0 4 36.068752462679406 37.0 35.0 37.0 35.0 37.0 5 36.034731918206006 37.0 35.0 37.0 35.0 37.0 6 36.083990329175535 37.0 35.0 37.0 35.0 37.0 7 36.315659433804385 37.0 36.0 37.0 35.0 37.0 8 36.303905128305296 37.0 37.0 37.0 35.0 37.0 9 38.06079038203422 39.0 39.0 39.0 35.0 39.0 10-11 37.656403593426035 39.0 37.5 39.0 35.0 39.0 12-13 36.73844234713785 39.0 35.0 39.0 33.0 39.0 14-15 37.673306315600115 40.0 35.0 41.0 33.0 41.0 16-17 37.96039915059565 40.0 35.0 41.0 33.5 41.0 18-19 37.86469334004677 40.0 36.0 41.0 34.0 41.0 20-21 37.65948492683461 40.0 35.0 41.0 33.0 41.0 22-23 37.5369188498606 39.0 35.0 41.0 33.0 41.0 24-25 37.496223931769855 39.0 35.0 41.0 33.0 41.0 26-27 37.473078724234405 39.0 35.0 41.0 33.5 41.0 28-29 37.41117498202274 39.0 35.0 41.0 33.0 41.0 30-31 37.2393574872447 39.0 35.0 41.0 33.0 41.0 32-33 36.95758765691819 39.0 35.0 41.0 32.5 41.0 34-35 36.64961154171327 39.0 35.0 41.0 31.5 41.0 36-37 36.46079510844953 39.0 35.0 41.0 31.0 41.0 38-39 36.36578789102044 39.0 35.0 41.0 31.0 41.0 40-41 36.21025579070276 39.0 35.0 41.0 30.0 41.0 42-43 36.184077237342734 38.5 35.0 41.0 30.0 41.0 44-45 36.06972451268488 38.0 35.0 41.0 30.0 41.0 46-47 35.96715961249182 38.0 35.0 40.5 30.0 41.0 48-49 35.868988108242625 38.0 35.0 40.0 30.0 41.0 50-51 35.63447374982698 37.5 35.0 40.0 29.5 41.0 52-53 35.43254874839218 37.0 35.0 40.0 29.0 41.0 54-55 35.22016679423165 36.5 34.5 40.0 29.0 41.0 56-57 34.913511422732995 36.0 34.0 40.0 27.5 41.0 58-59 34.68330581884422 36.0 34.0 39.5 27.0 41.0 60-61 34.337626172380084 35.0 34.0 39.0 26.5 41.0 62-63 33.94569469382716 35.0 33.5 39.0 26.0 40.0 64-65 33.602314834240275 35.0 33.0 38.0 25.0 40.0 66-67 33.29719265399312 35.0 33.0 37.5 24.5 40.0 68-69 32.81840461298134 35.0 33.0 37.0 22.5 39.5 70-71 32.57778715022718 35.0 33.0 36.5 22.5 39.0 72-73 32.30741304480979 35.0 33.0 36.0 20.5 39.0 74-75 32.027614322581705 35.0 32.5 35.5 20.0 38.0 76-77 30.099245075726337 33.0 29.5 34.5 18.5 36.0 78-79 31.12628571759283 34.0 31.5 35.0 19.0 37.0 80-81 31.28236690197463 35.0 32.0 35.0 18.5 36.0 82-83 31.119606038815444 34.5 32.0 35.0 18.0 36.0 84-85 30.897013821871052 34.0 32.0 35.0 17.0 36.0 86 30.509917514407128 34.0 31.0 35.0 15.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 9.0 10 13.0 11 18.0 12 47.0 13 78.0 14 315.0 15 852.0 16 2079.0 17 4515.0 18 9308.0 19 14337.0 20 16983.0 21 17391.0 22 16188.0 23 14953.0 24 15669.0 25 17520.0 26 20868.0 27 24962.0 28 30678.0 29 38769.0 30 48609.0 31 59280.0 32 70218.0 33 93437.0 34 250969.0 35 213445.0 36 164149.0 37 292446.0 38 432211.0 39 202442.0 40 691.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.4883631314527 22.741388398965398 29.472864829827344 13.297383639754553 2 32.60247519475966 24.685150808819877 29.33377317932936 13.378600817091105 3 29.621795140762774 24.871458383672067 31.63153445002129 13.875212025543862 4 26.982429792235465 27.228782132992645 30.867205574469253 14.921582500302636 5 24.787106339039276 30.81945913411107 29.939670684601964 14.45376384224769 6 23.116800814872583 39.97872148536764 26.420806258931357 10.483671440828415 7 85.87737460169099 4.200818634422868 7.721129921922514 2.2006768419636233 8 85.96322173688046 3.575388494458278 7.895621458504245 2.5657683101570186 9 81.40001244301173 6.315889484835201 9.019736642209878 3.2643614299431913 10-11 42.26203825213304 26.11493966827317 20.00040512131213 11.622616958281668 12-13 30.909140453147476 25.716594492375762 27.638292259337444 15.735972795139316 14-15 17.126913414482992 30.151153655279384 37.052298749959604 15.669634180278019 16-17 23.490476996584924 24.56723156975345 32.26952817353468 19.672763260126946 18-19 25.395921682333768 26.060320634227057 30.70742379981606 17.836333883623116 20-21 25.51639704396483 27.762336546813454 30.338618719594802 16.382647689626918 22-23 21.409841457703646 24.35615854326093 32.941161434573154 21.292838564462276 24-25 20.853933028624233 26.511162780154653 33.62215106877272 19.012753122448398 26-27 18.425351334223635 31.810631830092124 30.37599598351156 19.38802085217268 28-29 17.597794596742727 28.413038540058537 34.14024817538666 19.84891868781207 30-31 23.29300447128534 27.487288113113728 31.114980662691654 18.10472675290928 32-33 26.883560900584673 27.654207739456837 28.205655011230057 17.256576348728426 34-35 20.598320772161223 28.60735208369806 30.769807659011324 20.024519485129392 36-37 23.583944270740645 29.42982069041353 29.410890914816974 17.575344124028856 38-39 20.756655684985382 30.23871291029987 28.189305472561955 20.81532593215279 40-41 21.313528688617488 26.417430247996943 28.925227627537254 23.34381343584832 42-43 21.050344521915857 25.592188489442492 30.224895379832578 23.132571608809073 44-45 19.705245308188804 30.195162369245892 28.359239394382225 21.740352928183086 46-47 20.604783421664248 29.152891336336058 29.132900528731543 21.109424713268158 48-49 21.82979310358132 26.64873522573215 31.458176288538976 20.063295382147558 50-51 19.501527162660548 30.822955716864577 28.41168813568477 21.263828984790106 52-53 22.186058714617594 26.429825030999016 30.45694790284612 20.92716835153727 54-55 21.99256505934786 26.491364887460676 31.014351422482207 20.501718630709256 56-57 21.798902603531403 25.848741206094374 29.835400175456112 22.51695601491811 58-59 23.403231228294057 28.217229905862347 28.132154430315037 20.24738443552856 60-61 23.596700769199977 28.670073543986767 27.370068190598 20.36315749621525 62-63 22.242655126496718 26.368984491088053 30.601489399566812 20.78687098284842 64-65 20.42865210834294 29.57677362351594 30.43671595160344 19.55785831653768 66-67 19.746625556499232 29.282240783851865 26.85474423582305 24.11638942382586 68-69 18.819355924633932 30.78690474295776 27.360856503619807 23.032882828788498 70-71 20.003322959334017 29.877190367951435 29.037552334198075 21.081934338516476 72-73 22.186975060442656 29.738629233457424 27.440409789852964 20.633985916246957 74-75 21.052635386478496 31.68675634316283 25.76043440579555 21.50017386456312 76-77 24.11834268729506 28.99766717644432 27.11351547394612 19.770474662314506 78-79 19.261010497947144 29.952909470337648 29.73240772759257 21.05367230412264 80-81 17.567386383969158 29.56117163012617 30.425719801702762 22.44572218420191 82-83 18.8140025358665 28.32256144701616 31.173506223676156 21.68992979344118 84-85 17.548818323829863 28.036589206507212 30.11269124499084 24.301901224672083 86 18.697216671899483 27.96369148468762 30.84014925826628 22.498942585146615 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 772.0 1 1246.0 2 4716.5 3 5076.5 4 2541.0 5 3013.5 6 3776.5 7 4168.0 8 4484.5 9 4654.5 10 4455.5 11 4374.5 12 4432.5 13 4519.5 14 4520.0 15 4569.5 16 4651.0 17 4770.0 18 5450.0 19 6205.0 20 6885.0 21 7403.0 22 8060.0 23 9214.0 24 10986.0 25 12724.0 26 15216.0 27 18440.5 28 21022.5 29 22409.0 30 26136.0 31 29733.0 32 32225.0 33 38012.0 34 43126.5 35 48621.0 36 52166.0 37 54275.0 38 61644.5 39 71233.5 40 81364.0 41 93394.0 42 104602.5 43 109583.0 44 109081.0 45 108990.0 46 111768.5 47 115629.5 48 112286.0 49 99362.0 50 91275.0 51 81418.5 52 67662.0 53 62464.0 54 59214.0 55 56541.5 56 53793.0 57 51765.0 58 47819.0 59 37320.0 60 26371.5 61 18834.5 62 13045.0 63 8909.5 64 7422.0 65 6444.0 66 4837.0 67 3569.0 68 2552.5 69 1865.5 70 1187.5 71 819.0 72 729.5 73 536.0 74 336.5 75 232.5 76 177.5 77 94.0 78 42.0 79 27.0 80 30.5 81 22.5 82 13.0 83 11.5 84 6.0 85 5.0 86 6.0 87 5.0 88 2.5 89 1.5 90 2.5 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2073453.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.232881503346768 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94686422537461 14.394288204820613 2 8.860170401814312 3.2309287407148135 3 2.9129297037132384 1.5933330634614746 4 1.4203033785658548 1.0358489280077718 5 0.8204640725364181 0.7479712106154909 6 0.5318122986648771 0.5817882374147499 7 0.4170019101341206 0.5322202489901274 8 0.30490593373546937 0.4447451007572892 9 0.2481844739591344 0.40726062942006136 >10 2.675210129435894 11.431730274636058 >50 1.2236330133231688 16.338187875293784 >100 1.6334575397782645 47.70969653864651 >500 0.0026646941919340715 0.30943820538604794 >1k 0.002131755353547257 0.5776277003979783 >5k 0.0 0.0 >10k+ 2.664694191934071E-4 0.6649350414371883 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13686 0.6600583664061833 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAG 2468 0.11902849980202107 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.645745526906084E-5 0.0 0.0 0.07393463946373513 0.0 2 9.645745526906084E-5 0.0 0.0 0.23550087703941203 0.0 3 9.645745526906084E-5 0.0 0.0 0.3435814556683947 0.0 4 9.645745526906084E-5 0.0 0.0 0.5186999657093746 0.0 5 9.645745526906084E-5 0.0 0.0 0.8727470552744625 0.0 6 9.645745526906084E-5 0.0 0.0 1.1543545959324855 0.0 7 9.645745526906084E-5 0.0 0.0 1.3491986555759885 0.0 8 9.645745526906084E-5 0.0 0.0 1.742600386890853 0.0 9 9.645745526906084E-5 0.0 0.0 1.862786376156103 0.0 10 9.645745526906084E-5 0.0 0.0 2.1021455514062772 0.0 11 9.645745526906084E-5 0.0 0.0 2.4913513834169376 0.0 12 9.645745526906084E-5 0.0 0.0 2.79615694206717 0.0 13 9.645745526906084E-5 0.0 0.0 2.926615650318575 0.0 14 9.645745526906084E-5 0.0 0.0 2.98309149037861 0.0 15 9.645745526906084E-5 0.0 0.0 3.0727004663235675 0.0 16 9.645745526906084E-5 0.0 0.0 3.2496516680146597 0.0 17 9.645745526906084E-5 0.0 0.0 3.4674043732845643 0.0 18 9.645745526906084E-5 0.0 0.0 3.722437885015961 0.0 19 9.645745526906084E-5 0.0 0.0 3.896254219410809 0.0 20 9.645745526906084E-5 0.0 0.0 4.079185783328583 0.0 21 9.645745526906084E-5 0.0 0.0 4.298433579155158 0.0 22 9.645745526906084E-5 0.0 0.0 4.526169631045411 0.0 23 9.645745526906084E-5 0.0 0.0 4.740160495559822 0.0 24 9.645745526906084E-5 0.0 0.0 4.915761292877147 0.0 25 9.645745526906084E-5 0.0 0.0 5.076073583534327 0.0 26 9.645745526906084E-5 0.0 0.0 5.239617198943019 0.0 27 9.645745526906084E-5 0.0 0.0 5.453511606002162 0.0 28 9.645745526906084E-5 0.0 0.0 5.63287424407498 0.0 29 1.4468618290359124E-4 0.0 0.0 5.8888241016314335 0.0 30 1.4468618290359124E-4 0.0 0.0 6.135369357299153 0.0 31 1.4468618290359124E-4 0.0 0.0 6.347961588712162 0.0 32 1.4468618290359124E-4 0.0 0.0 6.534896137023603 0.0 33 1.4468618290359124E-4 0.0 0.0 6.723277547164079 0.0 34 1.4468618290359124E-4 0.0 0.0 6.945901353925071 0.0 35 1.4468618290359124E-4 0.0 0.0 7.1780744487577 0.0 36 1.4468618290359124E-4 0.0 0.0 7.3872424405086585 0.0 37 1.4468618290359124E-4 0.0 0.0 7.620958854625593 0.0 38 1.4468618290359124E-4 0.0 0.0 7.912308598265791 0.0 39 1.4468618290359124E-4 0.0 0.0 8.503689256520403 0.0 40 1.4468618290359124E-4 0.0 0.0 8.772178583261834 0.0 41 1.4468618290359124E-4 0.0 0.0 9.036327324516158 0.0 42 1.4468618290359124E-4 0.0 0.0 9.298209315571658 0.0 43 1.4468618290359124E-4 0.0 0.0 9.518373457223289 0.0 44 1.9291491053812168E-4 0.0 0.0 9.745144934560852 0.0 45 2.411436381726521E-4 0.0 0.0 9.963187012196563 0.0 46 2.893723658071825E-4 0.0 0.0 10.207031459116749 0.0 47 3.3760109344171295E-4 0.0 0.0 10.478221594605714 0.0 48 3.8582982107624337E-4 0.0 0.0 10.726985371744622 0.0 49 3.8582982107624337E-4 0.0 0.0 10.978064127809986 0.0 50 3.8582982107624337E-4 0.0 0.0 11.249736550575296 0.0 51 3.8582982107624337E-4 0.0 0.0 11.513210089642737 0.0 52 3.8582982107624337E-4 0.0 0.0 11.87637240873075 0.0 53 3.8582982107624337E-4 0.0 0.0 12.145344022748526 0.0 54 3.8582982107624337E-4 0.0 0.0 12.423672009927401 0.0 55 3.8582982107624337E-4 0.0 0.0 12.683431936966983 0.0 56 4.340585487107738E-4 0.0 0.0 12.950763774245184 0.0 57 4.340585487107738E-4 0.0 0.0 13.22378660138426 0.0 58 4.340585487107738E-4 0.0 0.0 13.465991271564873 0.0 59 4.822872763453042E-4 0.0 0.0 13.71986729383304 0.0 60 5.305160039798346E-4 0.0 0.0 14.028965209242747 0.0 61 5.305160039798346E-4 0.0 0.0 14.351711854573024 0.0 62 5.305160039798346E-4 0.0 0.0 14.736866473462383 0.0 63 5.305160039798346E-4 0.0 0.0 15.074033508355386 0.0 64 5.78744731614365E-4 0.0 0.0 15.403049888278153 0.0 65 5.78744731614365E-4 0.0 0.0 15.696907525755346 0.0 66 5.78744731614365E-4 0.0 0.0 15.979142039872618 0.0 67 5.78744731614365E-4 0.0 0.0 16.281295018502952 0.0 68 5.78744731614365E-4 0.0 0.0 16.690660458664844 0.0 69 6.269734592488955E-4 0.0 0.0 17.380090120200457 0.0 70 6.269734592488955E-4 0.0 0.0 17.721356596942396 0.0 71 6.269734592488955E-4 0.0 0.0 18.020712309369927 0.0 72 6.269734592488955E-4 0.0 0.0 18.334391953904912 0.0 73 6.269734592488955E-4 0.0 0.0 18.64787868352936 0.0 74 6.269734592488955E-4 0.0 0.0 18.994643235221634 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 6980 0.0 70.71634 1 GGGCGAT 1370 0.0 65.69343 7 CGTTAGG 405 0.0 65.18518 2 TACGGGA 695 0.0 64.46043 4 ACGGGAT 645 0.0 63.875973 5 GGCGATA 400 0.0 63.0 8 CGAGGGA 1350 0.0 62.22222 4 ATAGCGG 420 0.0 61.904766 2 TATAGCG 170 0.0 61.17647 1 TGTAGCG 170 0.0 61.17647 1 AGGGATC 2165 0.0 60.96998 6 TAGGGAC 1740 0.0 60.689655 5 GTACGGG 745 0.0 60.671143 3 TGCGGGA 1610 0.0 59.875774 4 CGGCATT 355 0.0 59.71831 80 TAGGGAT 2955 0.0 59.695435 5 AAGTACT 4500 0.0 58.933334 80 AGTAGGG 2635 0.0 58.74763 3 AGTGCGG 485 0.0 58.5567 2 CGATAGG 615 0.0 58.53659 2 >>END_MODULE