##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547284_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2682418 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.116050518599266 33.0 31.0 34.0 31.0 34.0 2 32.55030200364 34.0 31.0 34.0 31.0 34.0 3 32.65982520248522 34.0 31.0 34.0 31.0 34.0 4 36.18274034844681 37.0 35.0 37.0 35.0 37.0 5 36.16265921269541 37.0 35.0 37.0 35.0 37.0 6 36.21962125216875 37.0 37.0 37.0 35.0 37.0 7 36.38189424616149 37.0 37.0 37.0 35.0 37.0 8 36.36738010257909 37.0 37.0 37.0 35.0 37.0 9 38.137141191268476 39.0 39.0 39.0 37.0 39.0 10-11 37.79722977552343 39.0 37.5 39.0 35.0 39.0 12-13 37.187859237449196 39.0 37.0 39.0 34.5 39.0 14-15 38.39528309905466 40.0 37.0 41.0 34.0 41.0 16-17 38.52023920209304 40.0 37.0 41.0 34.5 41.0 18-19 38.36475560483116 40.0 37.0 41.0 34.0 41.0 20-21 38.1976573002418 40.0 35.5 41.0 34.0 41.0 22-23 38.02807299235242 40.0 35.0 41.0 34.0 41.0 24-25 38.018492270779575 40.0 35.0 41.0 34.0 41.0 26-27 38.00535487012091 40.0 35.0 41.0 34.0 41.0 28-29 37.90767509016119 40.0 35.0 41.0 34.0 41.0 30-31 37.77838241467214 40.0 35.5 41.0 34.0 41.0 32-33 37.457790322015434 40.0 35.0 41.0 33.0 41.0 34-35 37.143590782644615 40.0 35.0 41.0 32.5 41.0 36-37 36.953858235368244 40.0 35.0 41.0 32.0 41.0 38-39 36.86419715346378 40.0 35.0 41.0 32.0 41.0 40-41 36.74009885856716 40.0 35.0 41.0 31.0 41.0 42-43 36.68463658534949 40.0 35.0 41.0 31.0 41.0 44-45 36.562815713285545 39.0 35.0 41.0 31.0 41.0 46-47 36.420710344174545 39.0 35.0 41.0 31.0 41.0 48-49 36.32351911596179 39.0 35.0 41.0 31.0 41.0 50-51 36.10415546719415 38.5 35.0 40.5 30.5 41.0 52-53 35.90122661717898 38.0 35.0 40.0 30.0 41.0 54-55 35.73058673182181 38.0 35.0 40.0 29.5 41.0 56-57 35.46302738797607 37.0 35.0 40.0 29.0 41.0 58-59 35.231988079411934 37.0 35.0 40.0 29.0 41.0 60-61 34.892721604164606 36.0 34.0 40.0 28.0 41.0 62-63 34.526879293234686 36.0 34.0 39.0 27.0 41.0 64-65 34.21836622778403 35.0 34.0 39.0 26.5 40.0 66-67 33.93026534268708 35.0 34.0 38.5 26.0 40.0 68-69 33.46374744726586 35.0 33.5 37.5 25.5 40.0 70-71 33.16628392741176 35.0 33.0 37.0 25.0 39.0 72-73 32.901652166068075 35.0 33.0 36.5 25.0 39.0 74-75 32.61011035565672 35.0 33.0 36.0 24.5 38.5 76-77 30.68344456382264 33.5 30.0 34.5 20.5 36.0 78-79 31.736756165519317 34.5 32.0 35.0 22.5 37.0 80-81 31.869467771242213 35.0 33.0 35.0 23.0 37.0 82-83 31.687327068339087 35.0 33.0 35.0 21.0 36.0 84-85 31.471855803234245 35.0 32.0 35.0 20.0 36.0 86 31.050163695591067 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 13.0 10 15.0 11 28.0 12 34.0 13 119.0 14 342.0 15 985.0 16 2260.0 17 5425.0 18 11785.0 19 19958.0 20 24109.0 21 24223.0 22 20763.0 23 17339.0 24 15942.0 25 16852.0 26 19373.0 27 23014.0 28 28334.0 29 36386.0 30 45903.0 31 58386.0 32 73991.0 33 99571.0 34 259398.0 35 246578.0 36 231920.0 37 434977.0 38 658936.0 39 304821.0 40 636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.646464495839204 23.797036852571075 26.973760241692386 14.582738409897338 2 32.01130472581082 25.31152862827494 29.205739001154928 13.471427644759318 3 28.667493284044472 25.75467358182058 31.965152336436752 13.612680797698196 4 26.19375503743264 27.751267699515886 31.1725092808056 14.88246798224587 5 24.68291668188925 31.69315893346973 29.44839320344555 14.175531181195474 6 22.820007918229003 41.05948439057597 25.907856269977316 10.212651421217721 7 87.33541901374059 3.6087589629953274 7.522280271009215 1.5335417522548684 8 87.59346977242176 3.7998924850638494 6.642961686060859 1.9636760564535432 9 82.78657539578097 5.8778311210258805 8.046210545858251 3.289382937334897 10-11 37.6588585373346 29.669835200926926 20.71774421436182 11.953562047376657 12-13 29.04191293079602 23.728665703853764 29.131048926751905 18.09837243859831 14-15 18.539783881557607 29.98537140743911 34.03634332904119 17.438501381962094 16-17 23.318643850436434 26.594028223789135 31.61393936366368 18.473388562110753 18-19 24.184318029479375 27.517616568334986 30.08110592756237 18.216959474623266 20-21 26.544222414254605 27.847114059031814 29.329191050760915 16.279472475952666 22-23 22.525944875108948 24.052459385524553 32.426228872606735 20.995366866759767 24-25 20.55073072131189 27.607908238015106 32.68032797274697 19.161033067926027 26-27 19.761125969181535 31.957808216318263 29.380525331995237 18.90054048250496 28-29 18.584687397713555 27.966316211716446 34.274393476333664 19.174602914236335 30-31 22.191806049616428 27.55402029064821 30.502740437918323 19.751433221817035 32-33 24.684706112171927 28.17668610932375 28.66663584870069 18.471971929803633 34-35 20.49783068858023 28.75668519969669 30.083827352783942 20.661656758939138 36-37 22.200399042953038 29.935416478714355 28.656421184170398 19.20776329416221 38-39 20.731761418242794 30.381431976671795 28.28768670654611 20.599119898539303 40-41 21.127877907171815 27.78398072187109 28.93050225580055 22.15763911515655 42-43 21.392098472348454 27.849947323646052 28.217805726027784 22.540148477977706 44-45 20.32578442286027 29.864286624977908 28.315944793093394 21.49398415906842 46-47 21.13889408734955 29.649927789032134 28.292383961038137 20.918794162580177 48-49 21.218449175333596 27.1874107614846 30.585221990010503 21.008918073171294 50-51 19.860588469060378 29.845907684782908 28.849064538039933 21.44443930811678 52-53 21.565449530982868 27.315448226189954 29.680534502825434 21.438567740001744 54-55 21.151308259935625 27.386764478914174 30.591000358631653 20.870926902518548 56-57 21.493182643420976 27.092365917616124 29.34039362992643 22.074057809036475 58-59 22.28662721469957 28.155753502996177 28.490656564338597 21.066962717965655 60-61 23.148424294796712 28.82733041606491 27.6175264257845 20.406718863353884 62-63 21.895823096922253 27.27723643369527 29.70800971362405 21.118930755758424 64-65 20.218754124077602 30.025353990317694 29.365482933681474 20.390408951923227 66-67 20.417511364746286 29.469586768356017 26.972269049790153 23.14063281710755 68-69 19.53604919143847 31.516210374371184 26.480828118510985 22.46691231567936 70-71 20.073810271180704 30.155404564091054 28.472519942827702 21.29826522190054 72-73 21.348555668803296 30.741964898833814 27.02009903005423 20.889380402308664 74-75 20.114184291933622 31.40988839174208 26.778339542904945 21.697587773419354 76-77 22.610663215054476 29.007317278664253 27.02371517041714 21.358304335864133 78-79 19.851268519671432 30.3503965452066 28.251562582714552 21.546772352407416 80-81 18.23038020174335 29.847976713547254 29.046200107514935 22.875442977194457 82-83 19.585351723705998 29.37323713157308 29.111327913844896 21.930083230876026 84-85 18.640812132933792 28.83713500282208 28.18609925820659 24.33595360603754 86 18.823986418224152 29.46397615882387 29.46326784267031 22.24876958028167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 572.0 1 1085.5 2 5139.5 3 5914.0 4 3338.5 5 4058.0 6 4747.5 7 4908.0 8 5179.5 9 5539.0 10 5595.5 11 5635.5 12 5706.0 13 5847.5 14 5990.0 15 6159.5 16 6288.5 17 6545.0 18 6950.0 19 7442.0 20 8359.0 21 8892.0 22 9568.5 23 10707.0 24 12304.0 25 15449.5 26 20446.0 27 25853.5 28 30985.0 29 33695.0 30 36502.0 31 41945.5 32 47318.5 33 52947.0 34 60862.5 35 69282.5 36 72679.0 37 78559.5 38 87407.5 39 96564.5 40 107189.0 41 114505.0 42 122315.5 43 127245.0 44 129280.5 45 131531.5 46 133366.0 47 136031.5 48 136168.0 49 123448.5 50 111639.0 51 107192.5 52 96048.0 53 85529.0 54 78387.5 55 72548.0 56 66353.5 57 62678.0 58 56541.0 59 45102.0 60 35221.0 61 27781.0 62 23291.0 63 18514.5 64 15367.0 65 12369.0 66 8224.0 67 6084.5 68 4215.5 69 2877.5 70 2054.5 71 1693.0 72 1425.5 73 897.5 74 461.0 75 328.0 76 265.0 77 109.0 78 66.0 79 73.0 80 57.5 81 35.0 82 26.0 83 17.5 84 9.5 85 9.5 86 11.0 87 8.0 88 5.5 89 4.5 90 2.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2682418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.33090527387576 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96517552771897 13.858688822797454 2 7.439683300955234 2.57872893112981 3 2.296090869247566 1.1938000006542187 4 1.100954060073348 0.7632212210408047 5 0.7141704058634578 0.6188609826712496 6 0.4917012158194803 0.5112976316650172 7 0.3663025848004021 0.44438487791261283 8 0.29491104599071616 0.4088860321827775 9 0.258472352451417 0.4031603870626203 >10 3.6580649458797923 16.125944571433653 >50 1.8580996223784279 23.518716740958137 >100 1.5522503615307572 38.349505929992205 >500 0.0023874094839992127 0.24855672183098243 >1k 0.0015192605807267717 0.38953592785739316 >5k 0.0 0.0 >10k+ 2.1703722581811023E-4 0.5867112208110872 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15598 0.5814902822751712 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC 2737 0.10203480591019 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.727979755578735E-5 0.0 0.0 0.02083940683368513 0.0 2 3.727979755578735E-5 0.0 0.0 0.07601350721625041 0.0 3 3.727979755578735E-5 0.0 0.0 0.1110937967162463 0.0 4 3.727979755578735E-5 0.0 0.0 0.18024782118223184 0.0 5 3.727979755578735E-5 0.0 0.0 0.37950833911791526 0.0 6 3.727979755578735E-5 0.0 0.0 0.5061105316173691 0.0 7 3.727979755578735E-5 0.0 0.0 0.6126189132342535 0.0 8 3.727979755578735E-5 0.0 0.0 0.838348087434546 0.0 9 3.727979755578735E-5 0.0 0.0 0.9206246006401687 0.0 10 3.727979755578735E-5 0.0 0.0 1.172673311914847 0.0 11 3.727979755578735E-5 0.0 0.0 1.414581918254351 0.0 12 3.727979755578735E-5 0.0 0.0 1.6478043317633568 0.0 13 3.727979755578735E-5 0.0 0.0 1.7178530713706812 0.0 14 3.727979755578735E-5 0.0 0.0 1.7523368841097846 0.0 15 3.727979755578735E-5 0.0 0.0 1.8100087309285875 0.0 16 3.727979755578735E-5 0.0 0.0 1.9013442349402665 0.0 17 3.727979755578735E-5 0.0 0.0 2.0119533942882875 0.0 18 3.727979755578735E-5 0.0 0.0 2.139748540309527 0.0 19 3.727979755578735E-5 0.0 0.0 2.247897233018866 0.0 20 3.727979755578735E-5 0.0 0.0 2.348850924799938 0.0 21 3.727979755578735E-5 0.0 0.0 2.47537855770428 0.0 22 3.727979755578735E-5 0.0 0.0 2.624609587320097 0.0 23 3.727979755578735E-5 0.0 0.0 2.76962799981211 0.0 24 3.727979755578735E-5 0.0 0.0 2.880237159160131 0.0 25 3.727979755578735E-5 0.0 0.0 2.986074504421011 0.0 26 3.727979755578735E-5 0.0 0.0 3.0887803466872055 0.0 27 3.727979755578735E-5 0.0 0.0 3.1962207232429845 0.0 28 3.727979755578735E-5 0.0 0.0 3.309215789634576 0.0 29 3.727979755578735E-5 0.0 0.0 3.437868370999598 0.0 30 3.727979755578735E-5 0.0 0.0 3.5854218097254043 0.0 31 3.727979755578735E-5 0.0 0.0 3.723618019264708 0.0 32 3.727979755578735E-5 0.0 0.0 3.849549175408158 0.0 33 3.727979755578735E-5 0.0 0.0 3.9751075335760495 0.0 34 3.727979755578735E-5 0.0 0.0 4.11457125623225 0.0 35 3.727979755578735E-5 0.0 0.0 4.270773607990999 0.0 36 3.727979755578735E-5 0.0 0.0 4.414226268985669 0.0 37 3.727979755578735E-5 0.0 0.0 4.57102509750531 0.0 38 3.727979755578735E-5 0.0 0.0 4.7390824248868 0.0 39 3.727979755578735E-5 0.0 0.0 4.957877556741716 0.0 40 3.727979755578735E-5 0.0 0.0 5.132496128493024 0.0 41 3.727979755578735E-5 0.0 0.0 5.3171429657868385 0.0 42 3.727979755578735E-5 0.0 0.0 5.497465346564182 0.0 43 3.727979755578735E-5 0.0 0.0 5.662689409331431 0.0 44 3.727979755578735E-5 0.0 0.0 5.832461607400488 0.0 45 3.727979755578735E-5 0.0 0.0 5.997573830775069 0.0 46 7.45595951115747E-5 0.0 0.0 6.183637300376004 0.0 47 7.45595951115747E-5 0.0 0.0 6.376560252727203 0.0 48 7.45595951115747E-5 0.0 0.0 6.563294758684142 0.0 49 7.45595951115747E-5 0.0 0.0 6.7521169333042055 0.0 50 7.45595951115747E-5 0.0 0.0 6.953800638081015 0.0 51 7.45595951115747E-5 0.0 0.0 7.15526066407249 0.0 52 7.45595951115747E-5 0.0 0.0 7.372191806049616 0.0 53 7.45595951115747E-5 0.0 0.0 7.575403982526213 0.0 54 1.491191902231494E-4 0.0 0.0 7.7788025579905895 0.0 55 1.491191902231494E-4 0.0 0.0 7.98622735159099 0.0 56 1.491191902231494E-4 0.0 0.0 8.194695979522953 0.0 57 1.491191902231494E-4 0.0 0.0 8.406967146805606 0.0 58 1.491191902231494E-4 0.0 0.0 8.60462463344639 0.0 59 1.491191902231494E-4 0.0 0.0 8.812534064415017 0.0 60 1.491191902231494E-4 0.0 0.0 9.02860777104836 0.0 61 1.491191902231494E-4 0.0 0.0 9.264775288564273 0.0 62 1.491191902231494E-4 0.0 0.0 9.51346881805893 0.0 63 2.236787853347241E-4 0.0 0.0 9.774874758520111 0.0 64 2.236787853347241E-4 0.0 0.0 10.016522406276724 0.0 65 2.236787853347241E-4 0.0 0.0 10.249334742012618 0.0 66 2.236787853347241E-4 0.0 0.0 10.466079485001964 0.0 67 2.236787853347241E-4 0.0 0.0 10.689199073373352 0.0 68 2.6095858289051146E-4 0.0 0.0 10.942440738169816 0.0 69 2.6095858289051146E-4 0.0 0.0 11.248023238734604 0.0 70 2.6095858289051146E-4 0.0 0.0 11.512262443810025 0.0 71 2.6095858289051146E-4 0.0 0.0 11.757638071322217 0.0 72 2.6095858289051146E-4 0.0 0.0 11.997608128188821 0.0 73 2.6095858289051146E-4 0.0 0.0 12.24920948189283 0.0 74 2.6095858289051146E-4 0.0 0.0 12.523998869676538 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9515 0.0 72.2228 1 TACGGGA 985 0.0 71.47208 4 ACGGGAT 1185 0.0 70.210976 5 GGCGATA 380 0.0 64.210526 8 GGGCGAT 1465 0.0 64.16382 7 CGGGATC 725 0.0 63.448277 6 TATAGCG 95 0.0 63.157894 1 GCGGGAT 1815 0.0 63.030304 5 CGAGGGA 1815 0.0 61.928375 4 TAGGGAT 5780 0.0 61.591694 5 TAAGGGA 4490 0.0 61.380848 4 TGCGGGA 2300 0.0 61.04348 4 TAGGGAC 3370 0.0 61.0089 5 ATAGGGA 4875 0.0 60.471794 4 GTAGGGA 4605 0.0 60.45602 4 AGGGATT 6335 0.0 60.4262 6 AGGGATC 4225 0.0 60.307693 6 CGGGATG 1080 0.0 59.629627 6 ACGAGGG 1375 0.0 59.054546 3 GTACGGG 930 0.0 58.92473 3 >>END_MODULE