##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547283_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2060842 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.951255845911525 33.0 31.0 33.0 30.0 34.0 2 32.38097534891079 33.0 31.0 34.0 31.0 34.0 3 32.52513729824994 34.0 31.0 34.0 31.0 34.0 4 36.073063340129906 37.0 35.0 37.0 35.0 37.0 5 36.03382889129783 37.0 35.0 37.0 35.0 37.0 6 36.08611916876694 37.0 35.0 37.0 35.0 37.0 7 36.335892804979714 37.0 36.0 37.0 35.0 37.0 8 36.34460526328559 37.0 37.0 37.0 35.0 37.0 9 38.148055018288645 39.0 39.0 39.0 37.0 39.0 10-11 37.53834719012909 39.0 37.0 39.0 35.0 39.0 12-13 37.011629227277005 39.0 35.0 39.0 33.5 39.0 14-15 38.14928461279419 40.0 36.0 41.0 33.0 41.0 16-17 38.330734961729235 40.0 36.0 41.0 34.0 41.0 18-19 38.20608954980537 40.0 36.0 41.0 34.0 41.0 20-21 38.02620700665068 40.0 35.0 41.0 34.0 41.0 22-23 37.82700517555446 40.0 35.0 41.0 33.5 41.0 24-25 37.797017675299706 40.0 35.0 41.0 34.0 41.0 26-27 37.78586470966721 40.0 35.0 41.0 34.0 41.0 28-29 37.717268475700706 40.0 35.0 41.0 33.5 41.0 30-31 37.588963151954395 40.0 35.0 41.0 33.0 41.0 32-33 37.274908750889196 40.0 35.0 41.0 33.0 41.0 34-35 36.98337063200381 40.0 35.0 41.0 32.0 41.0 36-37 36.77693025472113 40.0 35.0 41.0 31.0 41.0 38-39 36.67808279334369 39.5 35.0 41.0 31.0 41.0 40-41 36.547163974724896 39.0 35.0 41.0 31.0 41.0 42-43 36.51722475570665 39.0 35.0 41.0 31.0 41.0 44-45 36.40508272832172 39.0 35.0 41.0 30.5 41.0 46-47 36.27703312529539 39.0 35.0 41.0 30.0 41.0 48-49 36.18220101298401 39.0 35.0 41.0 30.0 41.0 50-51 35.956087123612576 38.0 35.0 40.0 29.5 41.0 52-53 35.774840332252545 38.0 35.0 40.0 29.0 41.0 54-55 35.59760597852723 38.0 35.0 40.0 29.0 41.0 56-57 35.3130140495972 37.0 35.0 40.0 28.5 41.0 58-59 35.07465104069114 37.0 34.0 40.0 28.0 41.0 60-61 34.7185286402354 36.0 34.0 39.5 27.0 41.0 62-63 34.36069310505124 36.0 34.0 39.0 26.0 41.0 64-65 33.989191796362846 35.0 34.0 39.0 26.0 40.0 66-67 33.6846211402912 35.0 34.0 38.0 25.5 40.0 68-69 33.18912197053437 35.0 33.0 37.5 24.0 40.0 70-71 32.900032122792524 35.0 33.0 37.0 24.0 39.0 72-73 32.624078653288315 35.0 33.0 36.5 23.5 39.0 74-75 32.314316429886425 35.0 33.0 36.0 23.0 38.5 76-77 30.339980211971614 33.0 30.0 34.5 19.5 36.0 78-79 31.38620549270638 34.0 31.5 35.0 20.0 37.0 80-81 31.506958078300034 35.0 32.0 35.0 20.0 36.5 82-83 31.311126714226518 34.5 32.0 35.0 19.0 36.0 84-85 31.08889303498279 34.0 32.0 35.0 18.5 36.0 86 30.659187361282427 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 8.0 11 14.0 12 17.0 13 73.0 14 284.0 15 824.0 16 2014.0 17 4465.0 18 9527.0 19 16003.0 20 18638.0 21 17609.0 22 15439.0 23 13591.0 24 13648.0 25 15133.0 26 17788.0 27 21961.0 28 26670.0 29 33285.0 30 41497.0 31 51457.0 32 64227.0 33 83890.0 34 200881.0 35 189115.0 36 172936.0 37 324968.0 38 485442.0 39 218782.0 40 652.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.738795113841817 23.94860935481711 31.498387552272323 13.81420797906875 2 29.684759918518743 26.128640623589778 31.489556210519776 12.697043247371706 3 27.982640105354996 25.334887390687882 33.91739881077734 12.76507369317978 4 25.677708431796326 27.10125278890861 32.99869664923366 14.222342130061403 5 24.799378118264283 31.728148009405864 30.597493645801084 12.874980226528768 6 22.279971002143782 40.67264739363814 26.46408603861917 10.583295565598917 7 89.44242207796619 2.9873226574380762 6.254385343466408 1.3158699211293248 8 90.38116459194833 2.343314043483198 6.060969254314498 1.214552110253964 9 86.20578384951394 4.30362929326945 7.730723655670838 1.759863201545776 10-11 36.88213361334833 24.370451495068522 25.760004891204662 12.987410000378485 12-13 29.26141353873805 25.050683167365573 27.498056619575884 18.189846674320496 14-15 18.431616785760383 30.344126332829006 33.843011739861666 17.38124514154894 16-17 22.853134786655165 26.360075153747836 31.345246263420485 19.441543796176514 18-19 23.958605269108453 28.052126266836563 29.682552083080605 18.30671638097438 20-21 25.92234145072742 27.82289957211664 29.243192830891452 17.011566146264485 22-23 22.279655597081195 23.801290928659256 31.78159703655108 22.13745643770847 24-25 20.022714016892124 27.67725521898331 33.051951580955745 19.24807918316882 26-27 19.968585655765946 32.23806094790382 29.384931013634237 18.408422382696006 28-29 17.500783660270898 28.446091451940518 34.10176520082568 19.951359686962903 30-31 21.622812423271654 28.348461454104683 30.376249125357504 19.652476997266167 32-33 24.248729402836318 27.650809717581453 28.74897735973937 19.35148351984286 34-35 20.03906655629107 28.732915963475126 29.742236425693964 21.485781054539842 36-37 22.4528372383715 28.843259211526163 29.359286155852804 19.344617394249536 38-39 20.942022726633095 30.063076160132606 27.980529317628427 21.014371795605875 40-41 21.26177067431661 27.700716503254498 28.081192056450714 22.956320765978177 42-43 21.473868447945062 27.57237090470788 28.148834311412518 22.804926335934535 44-45 20.298183946173456 30.58349451340763 27.75256424315886 21.365757297260053 46-47 21.297799637235652 29.640627471683906 27.45863098675202 21.602941904328425 48-49 21.3468329935046 27.05566462640028 30.1154334005227 21.48206897957243 50-51 19.694498656374435 30.19855476547935 28.353920387880294 21.75302619026592 52-53 21.878387571681866 27.138203705087534 29.32364538378003 21.659763339450574 54-55 21.247164993725864 27.81445642121036 29.841419186914862 21.09695939814891 56-57 21.629508715369738 26.65320776653426 29.226403576790457 22.490879941305543 58-59 22.82038118400149 27.237653347515238 28.370806689692852 21.571158778790416 60-61 22.88913948764631 28.938123349582355 27.272614785607047 20.900122377164283 62-63 22.04048151192571 27.26150282263269 29.014427112801467 21.683588552640135 64-65 19.901913877919803 30.095975334353632 29.39725607300317 20.604854714723402 66-67 19.626177067431662 28.995284451694985 26.89985452548036 24.47868395539299 68-69 19.21818848800636 30.287765874336802 26.191891469603203 24.30215416805364 70-71 19.47990190417315 29.289799994371236 28.143957663906306 23.086340437549314 72-73 21.585449054318577 29.47921286542103 27.233213414711077 21.702124665549324 74-75 21.248038423129962 30.326439387396025 25.867946208394432 22.557575981079577 76-77 23.201536071178673 28.440486946597552 26.83818070477989 21.519796277443877 78-79 19.992750535945987 29.574052741549327 28.70132693336025 21.731869789144437 80-81 17.80655673748885 29.066687305479995 29.416204638686516 23.71055131834464 82-83 19.01244733948551 27.8238700492323 29.901152053384006 23.262530557898177 84-85 18.417277986376444 27.96451644521996 28.65246341058655 24.965742157817047 86 19.308758264825737 27.495945831849312 29.712612611738308 23.482683291586643 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 577.0 1 788.5 2 3813.5 3 4330.5 4 2213.0 5 2823.5 6 3551.0 7 3847.0 8 3988.0 9 4066.0 10 3921.5 11 3812.5 12 3844.5 13 3908.0 14 3912.0 15 3996.5 16 4145.0 17 4415.0 18 4942.5 19 5308.0 20 5472.5 21 5593.0 22 6548.0 23 7742.5 24 8632.0 25 10386.0 26 12783.0 27 15055.0 28 18300.0 29 20566.0 30 22492.5 31 26902.5 32 32648.0 33 36975.0 34 43837.5 35 49378.5 36 49122.0 37 53236.5 38 60007.0 39 66637.5 40 75921.0 41 86721.0 42 98181.0 43 104150.0 44 106455.5 45 112568.5 46 117274.0 47 123034.0 48 121989.0 49 108390.0 50 100698.0 51 92497.5 52 80277.5 53 72117.5 54 65989.5 55 59271.5 56 50625.0 57 46709.0 58 41082.0 59 30099.5 60 21337.5 61 16196.0 62 12620.0 63 9060.0 64 7341.0 65 5759.5 66 3439.5 67 2583.5 68 2109.0 69 1500.0 70 994.0 71 740.0 72 573.0 73 387.0 74 257.5 75 132.5 76 82.0 77 36.0 78 24.0 79 22.0 80 20.0 81 14.5 82 9.0 83 5.5 84 3.0 85 4.0 86 6.0 87 4.0 88 2.5 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2060842.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.940168860008654 #Duplication Level Percentage of deduplicated Percentage of total 1 79.41225646981124 15.834938035623509 2 8.05910964691761 3.2140001444172372 3 2.665362323905931 1.5944332443536806 4 1.275756251178018 1.0175518029080517 5 0.7935290264313755 0.7911551391179947 6 0.5509858376600801 0.6592050385449187 7 0.40834097394510815 0.5699671581048096 8 0.34897169992108984 0.556684369903264 9 0.2701069039950855 0.4847379548324536 >10 3.5080752168940923 16.772725014112886 >50 1.4460246751002837 20.844969837747833 >100 1.2582997419154431 36.615991478280094 >500 0.0024471017882398143 0.3079491759649519 >1k 4.894203576479629E-4 0.11510887436243411 >5k 0.0 0.0 >10k+ 2.447101788239814E-4 0.6205827317259165 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12718 0.6171263978509754 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.8523855783218706E-5 0.0 0.0 0.033918175192469875 0.0 2 4.8523855783218706E-5 0.0 0.0 0.10733476899247978 0.0 3 4.8523855783218706E-5 0.0 0.0 0.16173001132546794 0.0 4 4.8523855783218706E-5 0.0 0.0 0.273334879626871 0.0 5 4.8523855783218706E-5 0.0 0.0 0.5183318274763422 0.0 6 4.8523855783218706E-5 0.0 0.0 0.7478981891867499 0.0 7 4.8523855783218706E-5 0.0 0.0 0.9092885335217353 0.0 8 4.8523855783218706E-5 0.0 0.0 1.2408035162326854 0.0 9 4.8523855783218706E-5 0.0 0.0 1.3307182209989898 0.0 10 4.8523855783218706E-5 0.0 0.0 1.5163704932255846 0.0 11 9.704771156643741E-5 0.0 0.0 1.8000894779900642 0.0 12 9.704771156643741E-5 0.0 0.0 2.01500163525394 0.0 13 9.704771156643741E-5 0.0 0.0 2.0927853760744393 0.0 14 9.704771156643741E-5 0.0 0.0 2.122239356534853 0.0 15 9.704771156643741E-5 0.0 0.0 2.1748392162038623 0.0 16 1.455715673496561E-4 0.0 0.0 2.304592006568189 0.0 17 1.455715673496561E-4 0.0 0.0 2.470300974067881 0.0 18 1.455715673496561E-4 0.0 0.0 2.67245135726077 0.0 19 1.455715673496561E-4 0.0 0.0 2.8069594854918525 0.0 20 1.455715673496561E-4 0.0 0.0 2.9584509632470612 0.0 21 1.455715673496561E-4 0.0 0.0 3.154099149764999 0.0 22 1.455715673496561E-4 0.0 0.0 3.3805599847052807 0.0 23 1.455715673496561E-4 0.0 0.0 3.606778200366646 0.0 24 1.455715673496561E-4 0.0 0.0 3.7764176001847787 0.0 25 1.455715673496561E-4 0.0 0.0 3.9345568461822884 0.0 26 1.455715673496561E-4 0.0 0.0 4.080807747512909 0.0 27 1.455715673496561E-4 0.0 0.0 4.232347749123901 0.0 28 1.455715673496561E-4 0.0 0.0 4.39980357543179 0.0 29 1.455715673496561E-4 0.0 0.0 4.597247144613706 0.0 30 1.455715673496561E-4 0.0 0.0 4.816817592032771 0.0 31 1.455715673496561E-4 0.0 0.0 5.017027020994331 0.0 32 1.455715673496561E-4 0.0 0.0 5.200010481152849 0.0 33 1.455715673496561E-4 0.0 0.0 5.385614229523661 0.0 34 1.455715673496561E-4 0.0 0.0 5.584319418955942 0.0 35 1.455715673496561E-4 0.0 0.0 5.7929719988237816 0.0 36 1.455715673496561E-4 0.0 0.0 6.009533967184287 0.0 37 1.455715673496561E-4 0.0 0.0 6.233762704758541 0.0 38 1.455715673496561E-4 0.0 0.0 6.478759652608011 0.0 39 1.455715673496561E-4 0.0 0.0 6.877965414136552 0.0 40 1.455715673496561E-4 0.0 0.0 7.1376165664325555 0.0 41 1.455715673496561E-4 0.0 0.0 7.375480507481893 0.0 42 1.455715673496561E-4 0.0 0.0 7.628144224545113 0.0 43 1.455715673496561E-4 0.0 0.0 7.862271828699144 0.0 44 1.455715673496561E-4 0.0 0.0 8.106104204009817 0.0 45 1.455715673496561E-4 0.0 0.0 8.343531430357107 0.0 46 1.455715673496561E-4 0.0 0.0 8.607501205817817 0.0 47 1.455715673496561E-4 0.0 0.0 8.899081055219177 0.0 48 1.455715673496561E-4 0.0 0.0 9.167223882277243 0.0 49 1.455715673496561E-4 0.0 0.0 9.445944909896053 0.0 50 1.455715673496561E-4 0.0 0.0 9.733012040709575 0.0 51 1.455715673496561E-4 0.0 0.0 10.015517929079474 0.0 52 1.455715673496561E-4 0.0 0.0 10.349798771570066 0.0 53 1.455715673496561E-4 0.0 0.0 10.642494669654441 0.0 54 1.455715673496561E-4 0.0 0.0 10.933006994228572 0.0 55 1.455715673496561E-4 0.0 0.0 11.229827420054521 0.0 56 1.455715673496561E-4 0.0 0.0 11.5210676024654 0.0 57 1.455715673496561E-4 0.0 0.0 11.83040718308342 0.0 58 1.455715673496561E-4 0.0 0.0 12.114805501828863 0.0 59 1.455715673496561E-4 0.0 0.0 12.42681389451496 0.0 60 1.455715673496561E-4 0.0 0.0 12.750710631867944 0.0 61 1.455715673496561E-4 0.0 0.0 13.074655893076713 0.0 62 1.9409542313287483E-4 0.0 0.0 13.422377843619259 0.0 63 1.9409542313287483E-4 0.0 0.0 13.768547030776741 0.0 64 1.9409542313287483E-4 0.0 0.0 14.09943120336251 0.0 65 1.9409542313287483E-4 0.0 0.0 14.430266852092494 0.0 66 2.4261927891609353E-4 0.0 0.0 14.744555866000402 0.0 67 2.4261927891609353E-4 0.0 0.0 15.06534707658326 0.0 68 2.4261927891609353E-4 0.0 0.0 15.422142988157267 0.0 69 2.4261927891609353E-4 0.0 0.0 15.935379810776372 0.0 70 2.911431346993122E-4 0.0 0.0 16.284557476992415 0.0 71 3.396669904825309E-4 0.0 0.0 16.624661182176993 0.0 72 3.396669904825309E-4 0.0 0.0 16.958650881532886 0.0 73 3.396669904825309E-4 0.0 0.0 17.290699626657453 0.0 74 3.8819084626574965E-4 0.0 0.0 17.638081910209515 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7630 0.0 74.91481 1 TAGCGCG 115 0.0 73.04348 1 ACGGGTA 465 0.0 72.258064 5 CGTAAGG 340 0.0 70.588234 2 TACGGGT 695 0.0 67.913666 4 TAGGGTA 2125 0.0 67.011765 5 AGACGCG 85 0.0 65.882355 1 GGGCGAT 1280 0.0 65.625 7 CTATGCG 55 9.094947E-12 65.454544 1 GCGGGTC 965 0.0 64.663216 5 GACGGGT 675 0.0 64.59259 4 TCGATAG 150 0.0 64.0 1 TATAGCG 100 0.0 64.0 1 CGGGTAG 460 0.0 63.478264 6 TGCGGGT 1340 0.0 63.283585 4 CTACGGG 380 0.0 63.157894 3 TTAGCGG 445 0.0 62.921345 2 ACGGGTG 850 0.0 62.588234 5 TATTGCG 295 0.0 62.37288 1 GTGCGGG 1285 0.0 62.25681 3 >>END_MODULE