##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547281_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 442360 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.037333845736505 33.0 31.0 34.0 31.0 34.0 2 32.4576611809386 34.0 31.0 34.0 31.0 34.0 3 32.58242155710281 34.0 31.0 34.0 31.0 34.0 4 36.095015372095126 37.0 35.0 37.0 35.0 37.0 5 36.051962202730806 37.0 35.0 37.0 35.0 37.0 6 36.112012840220636 37.0 36.0 37.0 35.0 37.0 7 36.33070576001447 37.0 37.0 37.0 35.0 37.0 8 36.32274844018446 37.0 37.0 37.0 35.0 37.0 9 38.118261144768965 39.0 39.0 39.0 37.0 39.0 10-11 37.66563093408084 39.0 37.5 39.0 35.0 39.0 12-13 36.70509200651054 39.0 35.0 39.0 33.0 39.0 14-15 37.79660796636224 40.0 35.0 41.0 33.0 41.0 16-17 37.98793855683154 40.0 35.0 41.0 34.0 41.0 18-19 37.905448051360885 40.0 36.0 41.0 34.0 41.0 20-21 37.72239804683968 40.0 35.0 41.0 34.0 41.0 22-23 37.50973076227507 39.0 35.0 41.0 33.0 41.0 24-25 37.47487792747988 39.0 35.0 41.0 34.0 41.0 26-27 37.45384754498599 39.0 35.0 41.0 34.0 41.0 28-29 37.407839768514336 39.0 35.0 41.0 33.0 41.0 30-31 37.28518288271995 39.0 35.0 41.0 33.0 41.0 32-33 36.99460394249028 39.0 35.0 41.0 33.0 41.0 34-35 36.770894746360426 39.0 35.0 41.0 32.5 41.0 36-37 36.55538023329415 39.0 35.0 41.0 31.5 41.0 38-39 36.486022696446334 38.0 35.0 41.0 31.0 41.0 40-41 36.36999954787956 38.0 35.0 41.0 31.0 41.0 42-43 36.34562912559906 38.0 35.0 41.0 31.0 41.0 44-45 36.19772018265666 38.0 35.0 41.0 31.0 41.0 46-47 36.067214485939054 38.0 35.0 40.5 31.0 41.0 48-49 35.98392711818428 38.0 35.0 40.0 31.0 41.0 50-51 35.757499547879554 37.0 35.0 40.0 30.5 41.0 52-53 35.542587485306086 37.0 35.0 40.0 30.0 41.0 54-55 35.374264173975945 36.0 35.0 40.0 29.5 41.0 56-57 35.113489013473185 36.0 34.5 40.0 29.0 41.0 58-59 34.84596821593273 36.0 34.0 39.0 28.0 41.0 60-61 34.45375146939145 35.0 34.0 39.0 27.5 41.0 62-63 33.974685776290805 35.0 33.5 39.0 26.5 40.0 64-65 33.601781354552855 35.0 33.0 38.0 26.0 40.0 66-67 33.252709331765985 35.0 33.0 37.0 25.0 40.0 68-69 32.8260263134099 35.0 33.0 36.5 23.5 39.0 70-71 32.504258974590826 35.0 33.0 36.0 22.5 39.0 72-73 32.23500768604757 35.0 33.0 36.0 21.0 38.5 74-75 31.955765665973416 35.0 32.5 35.0 20.0 37.5 76-77 30.057272357356 33.0 29.5 34.5 18.5 35.5 78-79 30.979903246224794 34.0 31.0 35.0 18.5 36.0 80-81 31.241515959851704 35.0 32.0 35.0 19.0 36.0 82-83 31.079612758838955 34.5 32.0 35.0 18.0 36.0 84-85 30.89274233655846 34.0 32.0 35.0 17.5 36.0 86 30.472079301926033 34.0 31.0 35.0 15.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 3.0 12 8.0 13 14.0 14 47.0 15 134.0 16 389.0 17 743.0 18 1564.0 19 2461.0 20 2976.0 21 3338.0 22 3062.0 23 2845.0 24 3147.0 25 3637.0 26 4240.0 27 5073.0 28 6359.0 29 7928.0 30 10344.0 31 12943.0 32 15727.0 33 20313.0 34 57392.0 35 52811.0 36 35943.0 37 63201.0 38 87374.0 39 38296.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.716249208789222 24.12243421647527 30.71932362781445 13.441992946921062 2 29.555565602676552 26.68437471742472 30.507279139162673 13.252780540736053 3 29.611854598064923 25.500497332489374 31.565240980197125 13.322407089248575 4 26.27995297947373 27.433312234379237 31.725291617686953 14.561443168460078 5 25.26968984537481 32.28682521023601 28.29550592277783 14.147979021611356 6 23.066506917442805 41.18093860204358 24.502667510624832 11.249886969888777 7 88.12392621394339 4.334026584682159 5.890225155981554 1.6518220453928927 8 88.59978298218645 3.5220182656659738 5.696717605570123 2.181481146577448 9 84.50944931729812 6.093905416402929 6.956325165023962 2.44032010127498 10-11 45.109413147662536 25.891468487204992 17.97303101546252 11.026087349669952 12-13 31.297472646713086 27.715548422099644 25.42126322452301 15.565715706664255 14-15 15.653653133194684 34.89895108056786 34.010082285920966 15.437313500316485 16-17 19.29853512975857 25.55000452120445 33.72762003797812 21.423840311058868 18-19 23.95334117008771 28.658445609910483 28.578985441721677 18.809227778280132 20-21 26.83142689212406 28.924518491726197 27.098177954607106 17.145876661542637 22-23 21.981643909937606 26.69895560177231 28.219323627814454 23.100076860475628 24-25 19.124129668143595 27.975404647798175 34.18980016276336 18.71066552129487 26-27 18.411700877113663 36.25542544533864 27.29959761280405 18.033276064743646 28-29 16.440455737408445 29.329731440455735 35.25748259336287 18.972330228772947 30-31 22.746970793019262 30.28155800705308 28.811262320282122 18.160208879645538 32-33 26.094357536847816 30.022040871688215 26.395469753142237 17.48813183832173 34-35 20.16931910661 29.163125056515053 29.368952889049645 21.2986029478253 36-37 23.875689483678453 29.675942671127586 28.569943032823947 17.878424812370014 38-39 20.641106790849083 32.431729812822134 26.64741387105525 20.279749525273534 40-41 20.561081472104167 28.643299575006782 27.36391174608916 23.431707206799892 42-43 22.327516050275793 27.442806763721855 26.727326159688943 23.50235102631341 44-45 19.589926756487927 33.831720770413234 25.90751876299846 20.67083371010037 46-47 21.75920065105344 31.10023510263134 26.494936251017272 20.645627995297946 48-49 22.303327606474365 26.365516773668507 30.655574645085448 20.67558097477168 50-51 19.32769689845375 31.489171715344966 27.325481508273803 21.85764987792748 52-53 22.977552219911384 27.340175422732614 29.32566235645176 20.35661000090424 54-55 22.859209693462336 27.400420472013742 30.237702323899086 19.50266751062483 56-57 23.296184103445157 25.07482593362872 29.280337281851885 22.34865268107424 58-59 23.88812279591283 27.972917985351298 27.749457455466136 20.389501763269735 60-61 24.75291617686952 30.57667962745275 25.474048286463514 19.196355909214212 62-63 23.307600144678542 26.92275522199114 29.955014015733795 19.814630617596528 64-65 19.81621303915363 32.29496337824396 29.727710462067098 18.161113120535312 66-67 19.06207613708292 29.398340717967265 25.536779998191516 26.002803146758296 68-69 18.602269644633328 33.865629803779726 23.675513156704948 23.856587394882 70-71 19.349624740030745 32.06166922868252 27.575391084184826 21.013314947101907 72-73 22.828465503210055 31.206144316846007 25.653766163305903 20.31162401663803 74-75 21.795483316755586 33.48630075051994 24.0191246948187 20.69909123790578 76-77 25.541979383307712 29.6336694095307 25.570462971335562 19.253888235826025 78-79 19.766931910661 29.931051632154805 29.3812731711728 20.920743286011394 80-81 16.888620128402206 29.253549145492357 30.374694818699698 23.48313590740573 82-83 18.99414504023872 28.042544533863822 30.608101998372366 22.355208427525092 84-85 17.653720951261416 28.09589474636043 28.759268469120176 25.491115833257982 86 19.261461253277872 27.629758567682433 30.450538023329415 22.65824215571028 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 146.0 1 222.0 2 1024.5 3 1123.0 4 567.5 5 872.5 6 1298.5 7 1492.0 8 1546.0 9 1497.0 10 1227.0 11 969.5 12 825.0 13 781.5 14 792.0 15 803.0 16 836.5 17 909.5 18 937.0 19 965.5 20 1119.0 21 1221.0 22 1112.0 23 1149.0 24 1362.5 25 1723.5 26 2233.5 27 3051.5 28 4191.0 29 4729.0 30 6470.5 31 8052.5 32 8024.0 33 7546.5 34 8070.0 35 9690.0 36 10178.0 37 11347.5 38 13108.0 39 14728.5 40 16900.0 41 19439.5 42 22966.0 43 25095.0 44 25156.5 45 24980.0 46 25562.5 47 26655.5 48 25783.0 49 21601.0 50 18564.0 51 16434.0 52 13691.0 53 12215.0 54 11279.0 55 11338.0 56 10717.5 57 9965.0 58 9472.0 59 7771.0 60 5555.0 61 4056.5 62 3419.0 63 2736.0 64 2200.0 65 1716.5 66 1046.5 67 716.5 68 525.0 69 396.0 70 309.5 71 304.0 72 224.5 73 86.0 74 30.5 75 44.5 76 34.0 77 14.5 78 13.0 79 10.0 80 6.0 81 2.5 82 2.0 83 0.5 84 0.5 85 0.5 86 0.0 87 1.5 88 1.5 89 0.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 442360.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.693593856553353 #Duplication Level Percentage of deduplicated Percentage of total 1 78.47199471725979 17.80811577227094 2 6.725999547205237 3.052742040072748 3 2.2400065284764445 1.5250139517981736 4 1.216999970286567 1.104724121964834 5 0.8299999446366658 0.9417840822273131 6 0.6459999565169733 0.8796036386728391 7 0.5049999660034312 0.8022184888238584 8 0.4279999711870126 0.7770286013387682 9 0.3599999757647763 0.7352723914537396 >10 6.403999568882298 36.8861649712626 >50 2.0539998617245847 30.900729994536558 >100 0.11499999225819243 3.702686524370128 >500 0.001999999865359868 0.31203689452126293 >1k 9.99999932679934E-4 0.571878526686242 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2520 0.5696717605570124 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 736 0.16638032371823855 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 639 0.14445248214124243 No Hit GGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA 467 0.10557012388100188 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.260602224432589E-4 0.0 0.0 0.07211321095939958 0.0 2 2.260602224432589E-4 0.0 0.0 0.24504928112849264 0.0 3 2.260602224432589E-4 0.0 0.0 0.393796907496157 0.0 4 2.260602224432589E-4 0.0 0.0 0.6171444072700968 0.0 5 2.260602224432589E-4 0.0 0.0 1.112442354643277 0.0 6 2.260602224432589E-4 0.0 0.0 1.5175422732615969 0.0 7 2.260602224432589E-4 0.0 0.0 1.8003436115381137 0.0 8 2.260602224432589E-4 0.0 0.0 2.340175422732616 0.0 9 2.260602224432589E-4 0.0 0.0 2.4988696988877837 0.0 10 2.260602224432589E-4 0.0 0.0 2.7841576996111765 0.0 11 2.260602224432589E-4 0.0 0.0 3.2767429243150374 0.0 12 2.260602224432589E-4 0.0 0.0 3.6336920155529433 0.0 13 2.260602224432589E-4 0.0 0.0 3.761642101455828 0.0 14 2.260602224432589E-4 0.0 0.0 3.8041414232751607 0.0 15 2.260602224432589E-4 0.0 0.0 3.8782891762365495 0.0 16 2.260602224432589E-4 0.0 0.0 4.0430870783976856 0.0 17 4.521204448865178E-4 0.0 0.0 4.245863097929289 0.0 18 4.521204448865178E-4 0.0 0.0 4.503119631069717 0.0 19 4.521204448865178E-4 0.0 0.0 4.655710281218917 0.0 20 4.521204448865178E-4 0.0 0.0 4.8132742562618684 0.0 21 4.521204448865178E-4 0.0 0.0 4.990505470657383 0.0 22 4.521204448865178E-4 0.0 0.0 5.194411791301203 0.0 23 4.521204448865178E-4 0.0 0.0 5.4100732435120715 0.0 24 4.521204448865178E-4 0.0 0.0 5.56673297766525 0.0 25 4.521204448865178E-4 0.0 0.0 5.711185459806493 0.0 26 4.521204448865178E-4 0.0 0.0 5.826476173252554 0.0 27 4.521204448865178E-4 0.0 0.0 5.953295958043222 0.0 28 4.521204448865178E-4 0.0 0.0 6.090740573288724 0.0 29 4.521204448865178E-4 0.0 0.0 6.2349669952075235 0.0 30 4.521204448865178E-4 0.0 0.0 6.39773035536667 0.0 31 4.521204448865178E-4 0.0 0.0 6.563884618862465 0.0 32 4.521204448865178E-4 0.0 0.0 6.715118907677005 0.0 33 4.521204448865178E-4 0.0 0.0 6.866805316936432 0.0 34 4.521204448865178E-4 0.0 0.0 7.013970521746994 0.0 35 4.521204448865178E-4 0.0 0.0 7.206799891491094 0.0 36 4.521204448865178E-4 0.0 0.0 7.385387467221268 0.0 37 4.521204448865178E-4 0.0 0.0 7.561262320282123 0.0 38 4.521204448865178E-4 0.0 0.0 7.734198390451216 0.0 39 4.521204448865178E-4 0.0 0.0 7.923184736413781 0.0 40 4.521204448865178E-4 0.0 0.0 8.106067456370377 0.0 41 4.521204448865178E-4 0.0 0.0 8.29143683877385 0.0 42 4.521204448865178E-4 0.0 0.0 8.475449859842662 0.0 43 4.521204448865178E-4 0.0 0.0 8.635726557554932 0.0 44 4.521204448865178E-4 0.0 0.0 8.821548060403291 0.0 45 4.521204448865178E-4 0.0 0.0 8.997422913464147 0.0 46 4.521204448865178E-4 0.0 0.0 9.21331042589746 0.0 47 4.521204448865178E-4 0.0 0.0 9.435753684781625 0.0 48 4.521204448865178E-4 0.0 0.0 9.627678813635953 0.0 49 4.521204448865178E-4 0.0 0.0 9.830454833167556 0.0 50 4.521204448865178E-4 0.0 0.0 10.026222985803418 0.0 51 4.521204448865178E-4 0.0 0.0 10.223573559996384 0.0 52 4.521204448865178E-4 0.0 0.0 10.450764083551858 0.0 53 4.521204448865178E-4 0.0 0.0 10.652861922416133 0.0 54 4.521204448865178E-4 0.0 0.0 10.851342797721314 0.0 55 4.521204448865178E-4 0.0 0.0 11.05705760014468 0.0 56 4.521204448865178E-4 0.0 0.0 11.26322452301293 0.0 57 4.521204448865178E-4 0.0 0.0 11.486119902341985 0.0 58 4.521204448865178E-4 0.0 0.0 11.687313500316485 0.0 59 4.521204448865178E-4 0.0 0.0 11.89777556741116 0.0 60 4.521204448865178E-4 0.0 0.0 12.111854598064925 0.0 61 4.521204448865178E-4 0.0 0.0 12.332715435391988 0.0 62 4.521204448865178E-4 0.0 0.0 12.586581065195768 0.0 63 4.521204448865178E-4 0.0 0.0 12.872999367031378 0.0 64 4.521204448865178E-4 0.0 0.0 13.127543177502487 0.0 65 4.521204448865178E-4 0.0 0.0 13.343430689935799 0.0 66 4.521204448865178E-4 0.0 0.0 13.56542182837508 0.0 67 4.521204448865178E-4 0.0 0.0 13.782891762365495 0.0 68 4.521204448865178E-4 0.0 0.0 14.032010127497966 0.0 69 4.521204448865178E-4 0.0 0.0 14.28067637218555 0.0 70 4.521204448865178E-4 0.0 0.0 14.494981463061759 0.0 71 4.521204448865178E-4 0.0 0.0 14.710868975495073 0.0 72 4.521204448865178E-4 0.0 0.0 14.921104982367302 0.0 73 4.521204448865178E-4 0.0 0.0 15.142417940139254 0.0 74 4.521204448865178E-4 0.0 0.0 15.40781264128764 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCGG 25 1.2834935E-6 80.0 2 TCGTTAG 45 1.8189894E-12 80.0 1 CGAACGG 15 0.0013092555 80.0 2 CGAACCC 15 0.0013092555 80.0 6 GATCGGA 30 4.0543455E-8 80.0 9 GATCGCA 20 4.0881147E-5 80.0 9 GTCGAAG 20 4.0881147E-5 80.0 1 GCGAACG 15 0.0013092555 80.0 1 CGACCGG 15 0.0013092555 80.0 2 ATATGCG 15 0.0013092555 80.0 1 TATTACG 15 0.0013092555 80.0 1 GCGATAT 15 0.0013092555 80.0 9 GACGATA 30 4.0543455E-8 80.0 1 ATAGCGG 135 0.0 77.03703 2 GCGGGAT 250 0.0 75.2 5 TCGTAGG 50 3.6379788E-12 72.0 2 AAATGCG 45 1.1641532E-10 71.111115 1 TGTTGCG 40 3.7071004E-9 70.0 1 CGGGATC 120 0.0 70.0 6 TACGGGA 115 0.0 69.56521 4 >>END_MODULE