##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547278_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3360203 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12191971735041 33.0 31.0 34.0 31.0 34.0 2 32.551559831355426 34.0 31.0 34.0 31.0 34.0 3 32.654363739333604 34.0 31.0 34.0 31.0 34.0 4 36.17045696346322 37.0 35.0 37.0 35.0 37.0 5 36.14629264958099 37.0 35.0 37.0 35.0 37.0 6 36.204246588673364 37.0 37.0 37.0 35.0 37.0 7 36.42028145323363 37.0 37.0 37.0 35.0 37.0 8 36.4244395353495 37.0 37.0 37.0 35.0 37.0 9 38.242575820567986 39.0 39.0 39.0 37.0 39.0 10-11 37.771216649708364 39.0 37.5 39.0 35.0 39.0 12-13 37.219734641032105 39.0 37.0 39.0 34.5 39.0 14-15 38.450355975516956 40.0 37.0 41.0 34.0 41.0 16-17 38.60058067920301 40.0 37.0 41.0 35.0 41.0 18-19 38.455237972229654 40.0 37.0 41.0 35.0 41.0 20-21 38.28556905639332 40.0 36.0 41.0 34.0 41.0 22-23 38.104156058428615 40.0 35.0 41.0 34.0 41.0 24-25 38.09014008975053 40.0 35.0 41.0 34.0 41.0 26-27 38.084397430750464 40.0 35.0 41.0 34.0 41.0 28-29 38.01397817334251 40.0 36.0 41.0 34.0 41.0 30-31 37.863887836538446 40.0 35.5 41.0 34.0 41.0 32-33 37.56055288921532 40.0 35.0 41.0 33.0 41.0 34-35 37.253017302823665 40.0 35.0 41.0 33.0 41.0 36-37 37.07929119163336 40.0 35.0 41.0 32.5 41.0 38-39 36.98215479838569 40.0 35.0 41.0 32.0 41.0 40-41 36.872591179759084 40.0 35.0 41.0 31.5 41.0 42-43 36.82936269028984 40.0 35.0 41.0 32.0 41.0 44-45 36.71900656002033 39.5 35.0 41.0 31.0 41.0 46-47 36.588256721394515 39.0 35.0 41.0 31.0 41.0 48-49 36.48520744133613 39.0 35.0 41.0 31.0 41.0 50-51 36.27088467571751 39.0 35.0 41.0 31.0 41.0 52-53 36.08346326099941 38.5 35.0 40.0 30.0 41.0 54-55 35.901195552768684 38.0 35.0 40.0 30.0 41.0 56-57 35.64037827476494 37.5 35.0 40.0 29.5 41.0 58-59 35.392613630783615 37.0 35.0 40.0 29.0 41.0 60-61 35.04622071940297 36.5 34.5 40.0 28.5 41.0 62-63 34.69219136462886 36.0 34.0 39.0 27.5 41.0 64-65 34.325086758151215 35.5 34.0 39.0 26.5 40.0 66-67 33.99808210992015 35.0 34.0 38.5 26.0 40.0 68-69 33.49648577779378 35.0 34.0 37.5 25.5 40.0 70-71 33.178383716698065 35.0 33.5 37.0 25.0 39.5 72-73 32.886865912565405 35.0 33.0 37.0 24.5 39.0 74-75 32.57818337165939 35.0 33.0 36.0 24.0 38.5 76-77 30.609705127934234 33.5 30.0 34.5 20.0 36.0 78-79 31.64220703332507 34.5 32.0 35.0 20.0 37.0 80-81 31.73688643215901 35.0 33.0 35.0 20.0 37.0 82-83 31.53610302710878 35.0 32.5 35.0 19.5 36.0 84-85 31.297532619309013 35.0 32.0 35.0 19.0 36.0 86 30.869293015927905 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 7.0 10 5.0 11 16.0 12 25.0 13 79.0 14 287.0 15 904.0 16 2585.0 17 6450.0 18 14882.0 19 24177.0 20 28013.0 21 27435.0 22 22658.0 23 19861.0 24 19249.0 25 20868.0 26 24484.0 27 29947.0 28 37083.0 29 47680.0 30 60768.0 31 77563.0 32 97450.0 33 126089.0 34 306781.0 35 308215.0 36 281193.0 37 525855.0 38 845520.0 39 403013.0 40 1058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.301948126348318 24.45373092042356 30.12627510897407 14.118045844254052 2 30.618090633214717 25.14098106572728 31.62683921179762 12.61408908926038 3 28.046281727621814 24.516792586638367 33.93553901356555 13.50138667217427 4 25.43286819278478 27.52295025032714 33.016011235035506 14.02817032185258 5 23.85674317890913 31.81727413492578 31.016429662136485 13.30955302402861 6 22.767314950912194 40.839854020724346 26.134313909010853 10.25851711935261 7 89.29820609052489 3.0443994008695308 6.42032639099483 1.2370681176107516 8 90.0898844504335 2.1817134262424025 6.348961654995248 1.379440468328848 9 85.95906259234934 5.0399633593565625 7.076001063031014 1.9249729852630928 10-11 36.853487720831154 30.442491123304155 21.357310852945492 11.346710302919199 12-13 27.12987876030109 25.397483425852545 29.668713467608953 17.803924346237416 14-15 16.219555782790504 31.274866429200856 34.73037194479024 17.7752058432184 16-17 22.440355538043384 27.711554926889836 31.73888601373191 18.10920352133487 18-19 22.643884908143942 27.912167806528355 31.332868877267238 18.111078408060465 20-21 25.117857462778293 27.81389993402184 31.03854142145579 16.02970118174408 22-23 21.238716827525003 24.34396076665606 33.336899586126194 21.08042281969274 24-25 18.844114477607455 28.749944571801166 33.98825904268284 18.41768190790854 26-27 18.602030889205206 32.971876996717164 30.195333436700107 18.23075867737753 28-29 17.117254523015426 28.363911347022785 35.33713588137383 19.18169824858796 30-31 20.718733362240314 28.892569883426685 31.627910575640815 18.76078617869218 32-33 23.18855438198228 28.41508385058879 29.953264728351233 18.4430970390777 34-35 19.611240749442814 29.220541139925178 30.555713449455286 20.612504661176718 36-37 21.519756395670143 29.444872824647796 30.389146131945004 18.646224647737057 38-39 20.14381273988506 30.15896658624494 29.50211638999191 20.195104283878088 40-41 20.27712313809612 28.4444719560098 29.751714405349915 21.526690500544163 42-43 20.331167491964028 27.972417142654777 29.675230930988395 22.021184434392804 44-45 19.46998440272805 30.57938761437925 29.10437256320526 20.84625541968744 46-47 20.21419539236171 30.072126594732524 29.144652867698767 20.569025145207 48-49 21.130404918988525 27.713429813615427 30.93775881992844 20.218406447467608 50-51 19.089099676418357 30.461820312641823 29.39588768892832 21.053192322011498 52-53 21.04923422781302 28.290790764724633 30.503930863700795 20.156044143761555 54-55 20.947439782655987 28.43857945487222 30.742011717744433 19.871969044727358 56-57 20.927277310329167 27.15623133483304 30.243634089964207 21.672857264873578 58-59 21.82089891592859 28.596694902063952 28.843926988934893 20.73847919307256 60-61 21.785796870010532 29.1617351689764 28.750807614897077 20.301660346115995 62-63 21.037642666231772 27.94737401282006 30.485792078633345 20.529191242314823 64-65 19.66729391051672 30.627598987323086 29.616112478918684 20.08899462324151 66-67 19.43431691478164 29.86646937699895 27.294392630445248 23.40482107777417 68-69 18.57369926757401 31.376422793503846 27.694398225345314 22.355479713576827 70-71 19.665359503577612 29.98384323804246 28.83793032742367 21.512866930956253 72-73 20.882294908968298 30.331352004625913 27.961004141714056 20.825348944691736 74-75 20.074754412159027 31.84087389958285 26.704889555779815 21.379482132478305 76-77 22.745441272446932 29.899949497098838 27.23847338985174 20.116135840602485 78-79 19.156030156511378 30.62155768565173 29.15680987130837 21.065602286528524 80-81 17.761233473096716 29.97182015491326 30.01994224753683 22.247004124453195 82-83 18.953081108492555 29.358270913989422 30.047217385378204 21.64143059213982 84-85 18.24624881294374 28.96533334444377 29.11657420697499 23.67184363563749 86 18.779549926001497 29.24992924534619 29.86712409934757 22.103396729304748 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1040.0 1 1547.0 2 7356.0 3 8098.0 4 4038.0 5 5180.0 6 6870.0 7 7918.0 8 8399.5 9 9035.0 10 9028.5 11 8694.5 12 8290.0 13 8123.5 14 8188.0 15 8270.0 16 8665.5 17 9043.0 18 9465.0 19 10138.0 20 11138.0 21 11823.0 22 12543.5 23 14317.5 24 16576.5 25 20468.0 26 25240.5 27 30139.5 28 37991.5 29 43031.0 30 48590.5 31 57390.5 32 63888.5 33 71859.0 34 83554.0 35 98203.5 36 105871.0 37 110183.0 38 117245.5 39 128844.0 40 143703.5 41 155768.0 42 170619.0 43 179417.0 44 180663.5 45 184442.0 46 183589.0 47 183654.5 48 176722.5 49 152698.5 50 139057.0 51 126944.0 52 108215.5 53 95429.0 54 83253.5 55 75663.0 56 68294.5 57 62512.0 58 55489.5 59 41056.0 60 28410.0 61 20654.0 62 16048.0 63 11724.0 64 9485.0 65 7326.0 66 4125.0 67 2535.5 68 1570.0 69 1001.5 70 736.0 71 621.0 72 433.5 73 200.0 74 112.0 75 58.5 76 42.0 77 29.5 78 15.0 79 8.0 80 8.5 81 6.5 82 4.0 83 5.0 84 5.0 85 3.0 86 2.0 87 2.5 88 2.0 89 1.0 90 1.5 91 2.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3360203.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.659692092307456 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34041047760604 13.051271169418937 2 9.02306463141644 3.0064295697677514 3 2.9306374730839524 1.464705538072699 4 1.4742740654627284 0.9824380796113354 5 0.8997354499550001 0.7494657780392003 6 0.6092623835881379 0.6090074228402216 7 0.4189291195922395 0.48854610986357094 8 0.3387653482877201 0.45149811152133695 9 0.2711951514084039 0.40662249474516393 >10 2.6765250727233183 10.566249424561844 >50 1.1965677506987429 14.541931517676659 >100 1.8142982430780015 52.10168396234246 >500 0.004524880785254312 0.4821504395925585 >1k 0.0016289570826915523 0.43321171767518996 >5k 0.0 0.0 >10k+ 1.809952314101725E-4 0.6647886642712405 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22047 0.6561210736375154 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9760106755454953E-5 0.0 0.0 0.04151534892385966 0.0 2 2.9760106755454953E-5 0.0 0.0 0.1399915421776601 0.0 3 2.9760106755454953E-5 0.0 0.0 0.21165387924479562 0.0 4 2.9760106755454953E-5 0.0 0.0 0.31861170292390073 0.0 5 2.9760106755454953E-5 0.0 0.0 0.5997554314426836 0.0 6 2.9760106755454953E-5 0.0 0.0 0.7982553435015682 0.0 7 2.9760106755454953E-5 0.0 0.0 0.9455976320478257 0.0 8 2.9760106755454953E-5 0.0 0.0 1.2465913517724971 0.0 9 2.9760106755454953E-5 0.0 0.0 1.3538765366259122 0.0 10 2.9760106755454953E-5 0.0 0.0 1.5502039608916485 0.0 11 2.9760106755454953E-5 0.0 0.0 1.936638947111231 0.0 12 2.9760106755454953E-5 0.0 0.0 2.2037954254549503 0.0 13 2.9760106755454953E-5 0.0 0.0 2.294117349457756 0.0 14 2.9760106755454953E-5 0.0 0.0 2.33232932653176 0.0 15 2.9760106755454953E-5 0.0 0.0 2.387802165523928 0.0 16 2.9760106755454953E-5 0.0 0.0 2.513449336245459 0.0 17 2.9760106755454953E-5 0.0 0.0 2.6842723490217706 0.0 18 2.9760106755454953E-5 0.0 0.0 2.887087476560196 0.0 19 2.9760106755454953E-5 0.0 0.0 3.0363344119388027 0.0 20 2.9760106755454953E-5 0.0 0.0 3.1866527111606056 0.0 21 2.9760106755454953E-5 0.0 0.0 3.367088238418929 0.0 22 2.9760106755454953E-5 0.0 0.0 3.573742419728808 0.0 23 2.9760106755454953E-5 0.0 0.0 3.788550870289682 0.0 24 2.9760106755454953E-5 0.0 0.0 3.9531540207541034 0.0 25 2.9760106755454953E-5 0.0 0.0 4.09656797520864 0.0 26 2.9760106755454953E-5 0.0 0.0 4.232631183294581 0.0 27 2.9760106755454953E-5 0.0 0.0 4.381223396324567 0.0 28 2.9760106755454953E-5 0.0 0.0 4.537196115829906 0.0 29 2.9760106755454953E-5 0.0 0.0 4.730845130487652 0.0 30 2.9760106755454953E-5 0.0 0.0 4.93770763254482 0.0 31 2.9760106755454953E-5 0.0 0.0 5.123976140727212 0.0 32 2.9760106755454953E-5 0.0 0.0 5.298638207274977 0.0 33 2.9760106755454953E-5 0.0 0.0 5.471157546136349 0.0 34 2.9760106755454953E-5 0.0 0.0 5.6606401458483315 0.0 35 2.9760106755454953E-5 0.0 0.0 5.871311941570196 0.0 36 2.9760106755454953E-5 0.0 0.0 6.065288317402252 0.0 37 2.9760106755454953E-5 0.0 0.0 6.27090089497569 0.0 38 2.9760106755454953E-5 0.0 0.0 6.497256266957681 0.0 39 2.9760106755454953E-5 0.0 0.0 6.801850959599762 0.0 40 2.9760106755454953E-5 0.0 0.0 7.028206331581752 0.0 41 2.9760106755454953E-5 0.0 0.0 7.249532245522071 0.0 42 2.9760106755454953E-5 0.0 0.0 7.484220447395589 0.0 43 2.9760106755454953E-5 0.0 0.0 7.710218698096514 0.0 44 2.9760106755454953E-5 0.0 0.0 7.944966420183542 0.0 45 2.9760106755454953E-5 0.0 0.0 8.170756350137179 0.0 46 2.9760106755454953E-5 0.0 0.0 8.41249769731174 0.0 47 2.9760106755454953E-5 0.0 0.0 8.6640598797156 0.0 48 2.9760106755454953E-5 0.0 0.0 8.911783008348008 0.0 49 2.9760106755454953E-5 0.0 0.0 9.167958007298964 0.0 50 2.9760106755454953E-5 0.0 0.0 9.42282356155268 0.0 51 2.9760106755454953E-5 0.0 0.0 9.674951185984895 0.0 52 2.9760106755454953E-5 0.0 0.0 9.987164465956372 0.0 53 2.9760106755454953E-5 0.0 0.0 10.248726044230066 0.0 54 2.9760106755454953E-5 0.0 0.0 10.532637462677107 0.0 55 2.9760106755454953E-5 0.0 0.0 10.809674296463637 0.0 56 2.9760106755454953E-5 0.0 0.0 11.086859930783943 0.0 57 2.9760106755454953E-5 0.0 0.0 11.362408759232702 0.0 58 2.9760106755454953E-5 0.0 0.0 11.643135846256907 0.0 59 2.9760106755454953E-5 0.0 0.0 11.926749663636393 0.0 60 2.9760106755454953E-5 0.0 0.0 12.241254471828041 0.0 61 2.9760106755454953E-5 0.0 0.0 12.549747738455087 0.0 62 2.9760106755454953E-5 0.0 0.0 12.902196682759941 0.0 63 2.9760106755454953E-5 0.0 0.0 13.245866395571934 0.0 64 2.9760106755454953E-5 0.0 0.0 13.59167883607032 0.0 65 2.9760106755454953E-5 0.0 0.0 13.898178175544752 0.0 66 2.9760106755454953E-5 0.0 0.0 14.211343778932404 0.0 67 2.9760106755454953E-5 0.0 0.0 14.536294384595216 0.0 68 2.9760106755454953E-5 0.0 0.0 14.886094679398834 0.0 69 2.9760106755454953E-5 0.0 0.0 15.333567644573854 0.0 70 2.9760106755454953E-5 0.0 0.0 15.665214274256645 0.0 71 2.9760106755454953E-5 0.0 0.0 15.996712103405658 0.0 72 2.9760106755454953E-5 0.0 0.0 16.328269452768183 0.0 73 2.9760106755454953E-5 0.0 0.0 16.66155288832252 0.0 74 5.9520213510909906E-5 0.0 0.0 17.028703325364567 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12795 0.0 72.55959 1 ACGGGAT 2030 0.0 69.359604 5 GTTAGCG 270 0.0 68.14815 1 TTAGCGG 970 0.0 68.04124 2 CGGGATT 1995 0.0 65.96491 6 GGGCGAT 2325 0.0 65.72043 7 TACGGGA 1455 0.0 65.70447 4 GCGGGAT 3295 0.0 65.55387 5 CGTAAGG 480 0.0 64.166664 2 TTAGGGA 6590 0.0 63.186646 4 CGAGGGA 2465 0.0 63.12373 4 CGGGATA 1105 0.0 62.986423 6 TAGGGGT 5720 0.0 62.93706 5 CGGGATC 1375 0.0 62.254547 6 GTTTGCG 270 0.0 62.22222 1 AGGGATC 5715 0.0 62.22222 6 CTACGGG 990 0.0 61.818184 3 TAGCGGG 2310 0.0 61.64502 3 CGGGAAT 1085 0.0 61.56682 6 TAAGGGA 5190 0.0 61.27168 4 >>END_MODULE