##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547277_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2583216 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.197715560758375 33.0 31.0 34.0 31.0 34.0 2 32.64417687100111 34.0 31.0 34.0 31.0 34.0 3 32.75921796706121 34.0 31.0 34.0 31.0 34.0 4 36.26245075905383 37.0 37.0 37.0 35.0 37.0 5 36.24458814129364 37.0 37.0 37.0 35.0 37.0 6 36.300657784714865 37.0 37.0 37.0 35.0 37.0 7 36.45034561569764 37.0 37.0 37.0 35.0 37.0 8 36.44352040247505 37.0 37.0 37.0 35.0 37.0 9 38.254346132882425 39.0 39.0 39.0 37.0 39.0 10-11 37.88865332980285 39.0 38.0 39.0 35.0 39.0 12-13 37.177159981975954 39.0 35.0 39.0 34.5 39.0 14-15 38.35212909025029 40.0 36.0 41.0 34.5 41.0 16-17 38.5053899867452 40.0 36.0 41.0 35.0 41.0 18-19 38.39903263993409 40.0 36.0 41.0 35.0 41.0 20-21 38.250406082960154 40.0 35.0 41.0 34.0 41.0 22-23 38.07121316994011 40.0 35.0 41.0 34.0 41.0 24-25 38.04950573238939 40.0 35.0 41.0 34.0 41.0 26-27 38.06390619290063 40.0 35.0 41.0 34.0 41.0 28-29 38.007619571882486 40.0 35.0 41.0 34.0 41.0 30-31 37.879285936599956 40.0 35.5 41.0 34.0 41.0 32-33 37.59133924534379 40.0 35.0 41.0 33.5 41.0 34-35 37.309368244854475 40.0 35.0 41.0 33.0 41.0 36-37 37.145384474236764 40.0 35.0 41.0 33.0 41.0 38-39 37.0583814903593 40.0 35.0 41.0 33.0 41.0 40-41 36.94136069147915 40.0 35.0 41.0 32.5 41.0 42-43 36.892229492229845 39.5 35.0 41.0 33.0 41.0 44-45 36.762054934624125 39.0 35.0 41.0 32.0 41.0 46-47 36.63801768802919 39.0 35.0 41.0 32.0 41.0 48-49 36.55783701401664 39.0 35.0 41.0 32.0 41.0 50-51 36.333784321558866 38.5 35.0 40.5 31.5 41.0 52-53 36.16775678069507 38.0 35.0 40.0 31.0 41.0 54-55 36.00111450223288 38.0 35.0 40.0 31.0 41.0 56-57 35.74484073341138 37.0 35.0 40.0 30.5 41.0 58-59 35.51340247969972 37.0 35.0 40.0 30.0 41.0 60-61 35.16738805427033 36.0 35.0 40.0 29.5 41.0 62-63 34.796492627794194 36.0 34.0 39.0 28.5 41.0 64-65 34.47051988683873 35.0 34.0 39.0 28.5 40.0 66-67 34.167321664158166 35.0 34.0 38.5 28.0 40.0 68-69 33.70490543570495 35.0 34.0 37.5 26.5 40.0 70-71 33.42034541439818 35.0 34.0 37.0 26.0 39.0 72-73 33.15963299236301 35.0 34.0 36.5 26.0 39.0 74-75 32.851687199212144 35.0 33.0 36.0 25.5 38.5 76-77 30.92858011099343 33.5 30.0 34.5 22.5 36.0 78-79 31.94049123263405 34.5 32.5 35.0 24.0 37.0 80-81 32.07683252194164 35.0 33.0 35.0 24.0 37.0 82-83 31.881220927711816 35.0 33.0 35.0 23.5 36.0 84-85 31.66833861357316 35.0 33.0 35.0 22.5 36.0 86 31.252750447504198 34.0 32.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 8.0 10 14.0 11 23.0 12 37.0 13 86.0 14 245.0 15 645.0 16 1580.0 17 3764.0 18 8728.0 19 15864.0 20 19487.0 21 19278.0 22 16489.0 23 13822.0 24 12562.0 25 13462.0 26 15772.0 27 19135.0 28 23997.0 29 31525.0 30 41716.0 31 55214.0 32 71907.0 33 99780.0 34 281891.0 35 260501.0 36 219419.0 37 417639.0 38 624064.0 39 293797.0 40 763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.40542022037646 24.613505026292806 29.49714619296257 13.483928560368161 2 31.08532155266923 25.358738874333387 30.819451412502865 12.736488160494517 3 28.904396690017403 24.26854742305715 33.03397780131433 13.793078085611112 4 26.657623675294673 26.766015695164473 31.467945382809642 15.108415246731207 5 24.281709311184198 31.650276244804925 29.745092938414754 14.322921505596126 6 23.241300766176735 40.63562628909081 25.495777356597358 10.6272955881351 7 89.04710252646314 3.174763550550941 6.142962880378567 1.6351710426073547 8 89.64894921679023 2.683476720491047 5.986994506073049 1.6805795566456696 9 85.24269747477562 5.167202432936309 7.179771261868926 2.4103288304191364 10-11 39.76233501186118 28.384637599023854 19.78889879901642 12.064128590098544 12-13 29.544683835962616 24.668494620658898 28.554890493090785 17.231931050287702 14-15 17.582579234566527 30.88948039962589 34.26099482195836 17.266945543849218 16-17 22.621840372620795 25.686295687236377 32.16163495425857 19.530228985884264 18-19 24.180982155576615 27.249715083833486 30.207752661798317 18.361550098791586 20-21 26.7977784281299 27.24117921226874 29.094237570532233 16.86680478906913 22-23 21.960261937058302 24.24261076115973 31.757352075862027 22.03977522591994 24-25 20.30606422382023 26.724962217638787 33.242438882385365 19.726534676155612 26-27 19.01414748127915 32.28359533232993 29.590982713021287 19.11127447336963 28-29 17.661666697635813 27.948359719047883 35.19310812568519 19.196865457631105 30-31 22.54610144873677 27.573207195991355 30.847130089005333 19.033561266266545 32-33 25.071654867421074 27.73192408222928 28.705981226502157 18.49043982384748 34-35 20.15321212008597 28.485171197453095 30.427052944856335 20.9345637376046 36-37 22.684881945605788 28.739079503998116 29.772849037788557 18.803189512607542 38-39 20.689133235470823 30.007111290732176 28.327712432874367 20.976043040922633 40-41 21.12635954562065 26.943604406290454 28.870620962397258 23.059415085691633 42-43 21.04065242705217 26.688631535264566 28.473325498138752 23.797390539544505 44-45 19.79451195718825 29.86428544883587 28.50104288607689 21.84015970789899 46-47 21.16681299589349 29.124858316145456 28.489119763891214 21.21920892406984 48-49 21.422327827018727 25.892685706499186 31.096993050523068 21.587993415959023 50-51 19.633336894785415 29.65510820620498 28.91289385014648 21.79866104886312 52-53 21.675965153514067 26.266289772129003 30.316764064638807 21.74098100971812 54-55 21.400281664405917 26.73049795293928 31.25338725062093 20.615833132033867 56-57 21.55268858663 25.89400189531189 29.322364060922506 23.2309454571356 58-59 22.91196322723303 28.106012040804952 28.018930666270265 20.96309406569176 60-61 23.827953218004225 28.422671584567453 27.304491765303407 20.444883432124918 62-63 22.242448947358643 26.049815423874733 30.383580002601406 21.324155626165215 64-65 19.77980161163449 29.63542344116791 29.87270518609361 20.712069761103987 66-67 19.752200358003357 28.97678707471617 27.1223738162043 24.148638751076177 68-69 19.120952332286574 30.566588314720878 26.950824089042495 23.361635263950053 70-71 19.578153743240982 29.130587608624285 29.05643585360264 22.234822794532086 72-73 21.75956249883866 29.7848108714099 27.52443078704994 20.9311958427015 74-75 20.91702745724709 30.878370217589236 26.3385833782386 21.866018946925074 76-77 23.50448046156419 28.04595124836638 27.434310564815327 21.015257725254102 78-79 19.58802515933627 29.08291447559941 29.582756532941882 21.74630383212244 80-81 18.11509374361261 29.08465649020446 29.90806808257614 22.89218168360679 82-83 19.414423726084078 27.641397389920165 30.679877331202654 22.264301552793107 84-85 17.651621080080023 27.80427575549238 29.25456098135038 25.289542183077216 86 18.7948278425033 27.744176251618136 30.53968386693176 22.9213120389468 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 789.0 1 1040.5 2 3875.5 3 4341.5 4 2501.0 5 3159.0 6 3839.0 7 4138.0 8 4303.5 9 4568.0 10 4600.0 11 4511.5 12 4609.5 13 4914.0 14 5099.0 15 5345.0 16 5612.5 17 5406.0 18 5509.0 19 6061.5 20 6536.5 21 6790.0 22 7874.0 23 9609.0 24 10783.5 25 13571.0 26 17919.0 27 21478.5 28 24333.5 29 25713.0 30 30745.0 31 39375.5 32 48673.0 33 53849.5 34 60651.0 35 68190.0 36 68405.0 37 69808.5 38 76231.0 39 84800.5 40 93962.5 41 107050.5 42 120609.0 43 126691.0 44 134367.0 45 143292.5 46 144433.0 47 144169.0 48 138675.0 49 123898.0 50 114460.0 51 107084.5 52 92209.5 53 81940.5 54 75693.0 55 70726.0 56 66907.5 57 64578.0 58 57781.0 59 42620.5 60 30178.5 61 24125.5 62 19404.0 63 14065.5 64 11474.0 65 9674.0 66 6902.0 67 4996.0 68 3249.5 69 2195.0 70 1504.5 71 1056.0 72 924.0 73 615.0 74 373.5 75 227.5 76 104.5 77 67.5 78 51.0 79 30.0 80 27.0 81 22.5 82 16.5 83 10.5 84 8.5 85 6.5 86 5.0 87 6.5 88 5.5 89 4.5 90 5.0 91 3.0 92 1.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2583216.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.272625503952987 #Duplication Level Percentage of deduplicated Percentage of total 1 79.00339507188907 12.855926615456958 2 8.866378490307866 2.885585134981679 3 2.7675085518883518 1.3510389073159919 4 1.3073148830814987 0.8509378203251726 5 0.7976959908146419 0.6490304062265695 6 0.5090033858387308 0.49696928867986523 7 0.3696558246336303 0.42106895597325894 8 0.28648208930247304 0.37294526022473284 9 0.22258825289101064 0.3259885752787137 >10 2.704930383398104 10.690292321027762 >50 1.2784866480999497 15.278710063067328 >100 1.8834480819765895 52.98635346975714 >500 0.001915289771156486 0.2072981331223877 >1k 9.57644885578243E-4 0.19405224602191565 >5k 0.0 0.0 >10k+ 2.3941122139456075E-4 0.43380280254045983 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11135 0.43105183616081666 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1613430700336325E-4 0.0 0.0 0.03495642640801234 0.0 2 1.1613430700336325E-4 0.0 0.0 0.10227561303429523 0.0 3 1.1613430700336325E-4 0.0 0.0 0.15689744876154374 0.0 4 1.1613430700336325E-4 0.0 0.0 0.2729543328935714 0.0 5 1.1613430700336325E-4 0.0 0.0 0.5242302618131817 0.0 6 1.1613430700336325E-4 0.0 0.0 0.7145743909916941 0.0 7 1.1613430700336325E-4 0.0 0.0 0.8381800050789403 0.0 8 1.1613430700336325E-4 0.0 0.0 1.1079212888120853 0.0 9 1.1613430700336325E-4 0.0 0.0 1.1926606214888729 0.0 10 1.1613430700336325E-4 0.0 0.0 1.3719719915020656 0.0 11 1.1613430700336325E-4 0.0 0.0 1.6757019157515283 0.0 12 1.1613430700336325E-4 0.0 0.0 1.9125771906027216 0.0 13 1.1613430700336325E-4 0.0 0.0 1.9933679568413947 0.0 14 1.1613430700336325E-4 0.0 0.0 2.0244532396826282 0.0 15 1.1613430700336325E-4 0.0 0.0 2.0759781605564536 0.0 16 1.1613430700336325E-4 0.0 0.0 2.1856089463676285 0.0 17 1.1613430700336325E-4 0.0 0.0 2.331667193142192 0.0 18 1.1613430700336325E-4 0.0 0.0 2.519146676081288 0.0 19 1.1613430700336325E-4 0.0 0.0 2.643100693089544 0.0 20 1.1613430700336325E-4 0.0 0.0 2.7809521155025365 0.0 21 1.1613430700336325E-4 0.0 0.0 2.9481468061517115 0.0 22 1.1613430700336325E-4 0.0 0.0 3.130826071068002 0.0 23 1.1613430700336325E-4 0.0 0.0 3.3182281311357626 0.0 24 1.1613430700336325E-4 0.0 0.0 3.456969916569114 0.0 25 1.1613430700336325E-4 0.0 0.0 3.582627236746753 0.0 26 1.1613430700336325E-4 0.0 0.0 3.7039488761295996 0.0 27 1.1613430700336325E-4 0.0 0.0 3.8323159968039837 0.0 28 1.1613430700336325E-4 0.0 0.0 3.970128707781308 0.0 29 1.54845742671151E-4 0.0 0.0 4.131942508872661 0.0 30 1.54845742671151E-4 0.0 0.0 4.305795566456696 0.0 31 1.54845742671151E-4 0.0 0.0 4.471015973886814 0.0 32 1.54845742671151E-4 0.0 0.0 4.621332478584834 0.0 33 1.54845742671151E-4 0.0 0.0 4.78082359353612 0.0 34 1.54845742671151E-4 0.0 0.0 4.948482821413308 0.0 35 1.54845742671151E-4 0.0 0.0 5.136155861530743 0.0 36 1.54845742671151E-4 0.0 0.0 5.302847303516237 0.0 37 1.54845742671151E-4 0.0 0.0 5.493075298387746 0.0 38 1.54845742671151E-4 0.0 0.0 5.687135725390366 0.0 39 1.54845742671151E-4 0.0 0.0 5.961406247096642 0.0 40 1.54845742671151E-4 0.0 0.0 6.174473989012146 0.0 41 1.54845742671151E-4 0.0 0.0 6.385993273500938 0.0 42 1.54845742671151E-4 0.0 0.0 6.592983320016599 0.0 43 1.54845742671151E-4 0.0 0.0 6.783985543601465 0.0 44 1.54845742671151E-4 0.0 0.0 6.972665081046261 0.0 45 1.54845742671151E-4 0.0 0.0 7.168312676911261 0.0 46 1.54845742671151E-4 0.0 0.0 7.382270781847124 0.0 47 1.54845742671151E-4 0.0 0.0 7.618681519470304 0.0 48 1.54845742671151E-4 0.0 0.0 7.83136214702913 0.0 49 1.54845742671151E-4 0.0 0.0 8.055656205288292 0.0 50 1.54845742671151E-4 0.0 0.0 8.27654365720869 0.0 51 1.54845742671151E-4 0.0 0.0 8.499637660962149 0.0 52 1.54845742671151E-4 0.0 0.0 8.759623662907012 0.0 53 1.54845742671151E-4 0.0 0.0 8.991234182507386 0.0 54 1.9355717833893874E-4 0.0 0.0 9.233800038401744 0.0 55 1.9355717833893874E-4 0.0 0.0 9.470249487460592 0.0 56 1.9355717833893874E-4 0.0 0.0 9.706389245034098 0.0 57 1.9355717833893874E-4 0.0 0.0 9.946167877560374 0.0 58 1.9355717833893874E-4 0.0 0.0 10.180681754835833 0.0 59 1.9355717833893874E-4 0.0 0.0 10.423596013651201 0.0 60 1.9355717833893874E-4 0.0 0.0 10.681956135298016 0.0 61 1.9355717833893874E-4 0.0 0.0 10.952974896408199 0.0 62 1.9355717833893874E-4 0.0 0.0 11.236458739803409 0.0 63 1.9355717833893874E-4 0.0 0.0 11.55102786603985 0.0 64 2.322686140067265E-4 0.0 0.0 11.839544196071873 0.0 65 2.7098004967451427E-4 0.0 0.0 12.102588401434492 0.0 66 2.7098004967451427E-4 0.0 0.0 12.356961245207524 0.0 67 2.7098004967451427E-4 0.0 0.0 12.63595456206527 0.0 68 2.7098004967451427E-4 0.0 0.0 12.92032876848084 0.0 69 2.7098004967451427E-4 0.0 0.0 13.302178369907898 0.0 70 2.7098004967451427E-4 0.0 0.0 13.57478429988046 0.0 71 2.7098004967451427E-4 0.0 0.0 13.85160977634081 0.0 72 3.09691485342302E-4 0.0 0.0 14.121970443044638 0.0 73 3.09691485342302E-4 0.0 0.0 14.412267499117378 0.0 74 3.09691485342302E-4 0.0 0.0 14.709997150838335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7815 0.0 72.168915 1 CCGACGG 70 0.0 68.57143 2 TTAGCGG 590 0.0 68.47458 2 CGATAGG 380 0.0 68.42105 2 TACGGGA 900 0.0 67.55556 4 TTGCGAG 310 0.0 67.09677 1 TAACGCG 30 3.796924E-6 66.66667 1 TAATGCG 145 0.0 66.2069 1 CGAGGGA 1945 0.0 64.987144 4 TAGGGAC 3325 0.0 63.157894 5 ACGGGAT 1625 0.0 63.015385 5 TAGCGGG 1570 0.0 62.165607 3 GGGCGAT 1875 0.0 61.226665 7 ATTGCGG 625 0.0 60.8 2 AGGGATT 5375 0.0 60.65116 6 GGCGATA 495 0.0 60.606064 8 ATTAGCG 225 0.0 60.444443 1 CGGGATC 970 0.0 60.20619 6 GTAGGGA 4295 0.0 60.16298 4 TTGCGGG 2005 0.0 59.850376 3 >>END_MODULE