##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547276_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3223060 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06848957202162 33.0 31.0 34.0 31.0 34.0 2 32.50129318101432 34.0 31.0 34.0 31.0 34.0 3 32.629225332448044 34.0 31.0 34.0 31.0 34.0 4 36.15272194746607 37.0 35.0 37.0 35.0 37.0 5 36.12419160673397 37.0 35.0 37.0 35.0 37.0 6 36.18138352993739 37.0 36.0 37.0 35.0 37.0 7 36.38008569496069 37.0 37.0 37.0 35.0 37.0 8 36.38111266932666 37.0 37.0 37.0 35.0 37.0 9 38.169370101704594 39.0 39.0 39.0 37.0 39.0 10-11 37.75415552301229 39.0 37.5 39.0 35.0 39.0 12-13 37.140241106277884 39.0 36.0 39.0 34.0 39.0 14-15 38.31945573461245 40.0 37.0 41.0 33.5 41.0 16-17 38.46241211767699 40.0 37.0 41.0 34.0 41.0 18-19 38.3177710002296 40.0 36.0 41.0 34.0 41.0 20-21 38.184316301899436 40.0 35.5 41.0 34.0 41.0 22-23 38.00600857570135 40.0 35.0 41.0 34.0 41.0 24-25 37.99217994700688 40.0 35.0 41.0 34.0 41.0 26-27 37.99736601242297 40.0 35.0 41.0 34.0 41.0 28-29 37.92547765167264 40.0 35.0 41.0 34.0 41.0 30-31 37.796065850465084 40.0 35.5 41.0 34.0 41.0 32-33 37.5334883619914 40.0 35.0 41.0 33.0 41.0 34-35 37.24974279101227 40.0 35.0 41.0 33.0 41.0 36-37 37.08224513350667 40.0 35.0 41.0 32.0 41.0 38-39 36.98279026763386 40.0 35.0 41.0 32.0 41.0 40-41 36.858642408146295 40.0 35.0 41.0 31.5 41.0 42-43 36.82110851178693 39.5 35.0 41.0 32.0 41.0 44-45 36.707275539394246 39.0 35.0 41.0 31.0 41.0 46-47 36.57695001023872 39.0 35.0 41.0 31.0 41.0 48-49 36.47385683170651 39.0 35.0 41.0 31.0 41.0 50-51 36.25175950804515 38.5 35.0 40.0 31.0 41.0 52-53 36.06305095158018 38.0 35.0 40.0 30.0 41.0 54-55 35.86296780078558 38.0 35.0 40.0 30.0 41.0 56-57 35.57598338225165 37.0 35.0 40.0 29.5 41.0 58-59 35.32457478297022 37.0 35.0 40.0 29.0 41.0 60-61 34.97184368271146 36.0 34.0 39.5 28.5 41.0 62-63 34.62158057870471 36.0 34.0 39.0 28.0 41.0 64-65 34.28580370827723 35.0 34.0 39.0 27.5 40.0 66-67 33.995270333161656 35.0 34.0 38.0 26.5 40.0 68-69 33.52580498036028 35.0 33.5 37.5 26.0 40.0 70-71 33.23269982563154 35.0 33.0 37.0 26.0 39.0 72-73 32.99059201504161 35.0 33.0 36.5 25.5 39.0 74-75 32.69654489832644 35.0 33.0 36.0 25.0 38.5 76-77 30.748649109852128 33.0 30.0 34.5 21.5 36.0 78-79 31.82224780177843 34.5 32.0 35.0 23.5 37.0 80-81 31.937414599790262 35.0 33.0 35.0 24.0 36.5 82-83 31.758875106265474 35.0 32.5 35.0 23.0 36.0 84-85 31.544893517340665 34.5 32.0 35.0 21.5 36.0 86 31.135622358876347 34.0 32.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 12.0 10 16.0 11 23.0 12 72.0 13 108.0 14 368.0 15 1039.0 16 2448.0 17 5610.0 18 11713.0 19 18651.0 20 23089.0 21 24297.0 22 21474.0 23 18707.0 24 18521.0 25 20200.0 26 23856.0 27 29147.0 28 36467.0 29 46164.0 30 58822.0 31 75420.0 32 93899.0 33 125948.0 34 321901.0 35 290325.0 36 290190.0 37 538347.0 38 783387.0 39 342149.0 40 686.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.255465303159106 24.078515448052475 30.545258232859457 13.120761015928961 2 30.635389971021326 25.123361029580586 31.196875019391513 13.044373980006577 3 29.35852885146414 25.163074841920412 32.080817608111545 13.397578698503906 4 26.611884358342692 27.08624723089238 31.725441040501885 14.576427370263042 5 24.106253063858567 32.36669500412651 29.338237575471755 14.188814356543162 6 23.70297171011399 40.903147940156245 24.777044175410946 10.616836174318815 7 89.1074630940783 3.3263420476193435 5.935787729673043 1.630407128629315 8 89.88473686496683 2.586641266374191 5.745130404025988 1.7834914646329887 9 85.062611307267 5.607559275967558 6.913181883055233 2.416647533710201 10-11 38.068543557985265 29.13315296643562 20.22059781698138 12.57770565859773 12-13 29.804673198761428 23.54303053619852 28.253662668395872 18.39863359664418 14-15 18.14814182795232 30.062518228019336 33.45272815274925 18.336611791279093 16-17 24.63785967372621 26.460739173332176 30.151734686912434 18.749666466029176 18-19 24.339649277394773 27.755269836739 29.45432291052602 18.450757975340203 20-21 26.943572257419966 27.41205562415841 29.063731360880652 16.58064075754097 22-23 23.339698919660197 23.92138216477509 31.823081171309255 20.91583774425546 24-25 20.93411230321496 27.10289290301763 32.29472923246852 19.668265561298888 26-27 20.14216303761022 31.308554603389325 28.850471291257378 19.698811067743076 28-29 18.75523570768152 27.87701749269328 33.10050076635247 20.26724603327273 30-31 22.698072639044884 27.178457738918915 30.32811986124987 19.795349760786333 32-33 24.95451527430454 27.321737727501194 28.955697380749974 18.768049617444294 34-35 21.520232325802187 27.65897935502287 30.04805991821437 20.772728400960577 36-37 22.9116895124509 28.97364616234262 28.931807040514297 19.182857284692187 38-39 22.03575173903061 29.220321681879952 28.039564885543548 20.704361693545888 40-41 21.906495690430834 27.201339720638153 28.737085254385587 22.155079334545434 42-43 21.32827189068773 26.881209161480086 28.654989357939346 23.135529589892833 44-45 20.944009729884023 29.234050870911492 27.868919598145865 21.95301980105862 46-47 21.628948887082462 28.555332510099095 28.34204141405993 21.473677188758508 48-49 21.864811700681962 26.566911568509425 30.31960311008793 21.24867362072068 50-51 20.37920485501356 28.742251152631347 28.840046415518174 22.038497576836917 52-53 22.232940125222616 26.544200232077593 29.806255545971837 21.416604096727955 54-55 22.02211562924674 26.120069126854606 30.701445210452178 21.156370033446475 56-57 22.397256023778645 26.126801859102837 29.037157235670453 22.438784881448065 58-59 23.209325920088364 27.526620664834038 28.300217805439555 20.963835609638046 60-61 23.84770994024312 28.167626417131547 27.40695177874442 20.577711863880907 62-63 22.912915055878575 26.425989587534826 29.630242688625096 21.030852667961504 64-65 21.276783553517465 28.782864731032 29.232189285958064 20.708162429492468 66-67 21.34508820810038 28.377628713086324 27.41528237141102 22.862000707402284 68-69 20.80811402828368 29.952064187449196 27.22305821176149 22.01676357250563 70-71 20.619085589470878 28.487260553635362 28.90658256439533 21.987071292498435 72-73 21.989584432185563 29.366238915812925 27.568428760246473 21.07574789175504 74-75 21.242918220572996 30.185863744391977 26.66231779737268 21.908900237662348 76-77 23.06570464093129 28.031327372124625 27.1597643233449 21.74320366359919 78-79 21.01572729021489 28.545062766439344 28.323953013595776 22.11525692974999 80-81 19.63564128499004 28.626041711913526 28.910460866381637 22.8278561367148 82-83 20.558661644524147 28.147071416604096 29.55675662258847 21.737510316283284 84-85 19.588062276221976 27.62143739179537 28.850098974266693 23.94040135771596 86 20.3666701829938 27.591264202341875 29.3175429560728 22.724522658591525 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 602.0 1 1123.5 2 4726.5 3 5356.0 4 3157.0 5 3834.5 6 4483.5 7 4708.0 8 4879.5 9 5154.0 10 5205.0 11 5241.0 12 5251.0 13 5283.5 14 5394.0 15 5479.5 16 5535.5 17 5722.0 18 6058.0 19 6871.0 20 8038.5 21 8513.0 22 8733.5 23 10678.5 24 12776.5 25 15882.5 26 20957.5 27 27512.5 28 33817.5 29 35910.0 30 41026.5 31 49732.5 32 54502.5 33 60337.0 34 66618.0 35 74272.0 36 80299.0 37 83587.5 38 90812.0 39 101521.5 40 118483.5 41 134146.0 42 144020.5 43 148421.0 44 155242.5 45 163569.5 46 169349.5 47 174740.5 48 172442.0 49 158145.5 50 147264.0 51 136902.5 52 120824.0 53 115057.5 54 111492.5 55 102603.0 56 92016.5 57 86804.0 58 78524.0 59 60537.0 60 42858.0 61 33664.0 62 29128.0 63 21501.5 64 17189.0 65 13827.0 66 8895.5 67 6249.0 68 4681.5 69 3522.5 70 2396.0 71 1938.0 72 1536.5 73 906.5 74 540.5 75 334.0 76 165.5 77 92.0 78 81.5 79 45.0 80 37.5 81 22.5 82 17.0 83 13.5 84 8.5 85 6.0 86 3.0 87 3.5 88 2.5 89 0.5 90 1.0 91 1.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3223060.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.28447190134405 #Duplication Level Percentage of deduplicated Percentage of total 1 79.35367297572145 12.922326578415808 2 8.627790107458322 2.809980111511984 3 2.6165791483196856 1.27828828855364 4 1.193290259587408 0.7772840680959477 5 0.6790844504459157 0.552926582596309 6 0.4580362051619651 0.4475326627654968 7 0.3369083648390346 0.384046236038432 8 0.2728054036675679 0.35539935444474646 9 0.2259276814262486 0.33112016819294005 >10 2.8871139915736617 11.72950989611672 >50 1.4658758279187212 17.508777469394047 >100 1.8780974803860657 49.878525438468316 >500 0.0034690345156838756 0.3601326437334729 >1k 0.0011563448385612917 0.24576895277357963 >5k 0.0 0.0 >10k+ 1.9272413976021528E-4 0.41838154889855583 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13331 0.41361315023611106 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2410566356195666E-4 0.0 0.0 0.029785359254869595 0.0 2 1.2410566356195666E-4 0.0 0.0 0.09729884023257401 0.0 3 1.2410566356195666E-4 0.0 0.0 0.14306280367104554 0.0 4 1.2410566356195666E-4 0.0 0.0 0.22863365869701463 0.0 5 1.2410566356195666E-4 0.0 0.0 0.43607627534082516 0.0 6 1.2410566356195666E-4 0.0 0.0 0.5914565661203949 0.0 7 1.2410566356195666E-4 0.0 0.0 0.7033067954056084 0.0 8 1.2410566356195666E-4 0.0 0.0 0.9343605145420811 0.0 9 1.2410566356195666E-4 0.0 0.0 1.014967143025572 0.0 10 1.2410566356195666E-4 0.0 0.0 1.1821995246753085 0.0 11 1.2410566356195666E-4 0.0 0.0 1.4581794940212096 0.0 12 1.2410566356195666E-4 0.0 0.0 1.6689419371653025 0.0 13 1.2410566356195666E-4 0.0 0.0 1.742164278666857 0.0 14 1.2410566356195666E-4 0.0 0.0 1.7739353285387178 0.0 15 1.2410566356195666E-4 0.0 0.0 1.824694544935558 0.0 16 1.2410566356195666E-4 0.0 0.0 1.9340006081177514 0.0 17 1.2410566356195666E-4 0.0 0.0 2.0780562570972925 0.0 18 1.2410566356195666E-4 0.0 0.0 2.238121536676326 0.0 19 1.2410566356195666E-4 0.0 0.0 2.3585350567473147 0.0 20 1.2410566356195666E-4 0.0 0.0 2.491886592244637 0.0 21 1.2410566356195666E-4 0.0 0.0 2.6468014867858494 0.0 22 1.2410566356195666E-4 0.0 0.0 2.826165197048767 0.0 23 1.2410566356195666E-4 0.0 0.0 2.998982333558792 0.0 24 1.2410566356195666E-4 0.0 0.0 3.1301930463596706 0.0 25 1.2410566356195666E-4 0.0 0.0 3.2564085062021806 0.0 26 1.2410566356195666E-4 0.0 0.0 3.3724162752167195 0.0 27 1.2410566356195666E-4 0.0 0.0 3.5000899766060822 0.0 28 1.2410566356195666E-4 0.0 0.0 3.6289116553833933 0.0 29 1.2410566356195666E-4 0.0 0.0 3.788604617971741 0.0 30 1.2410566356195666E-4 0.0 0.0 3.9622284412949185 0.0 31 1.551320794524458E-4 0.0 0.0 4.1220765359627185 0.0 32 1.8615849534293498E-4 0.0 0.0 4.271561807723096 0.0 33 1.8615849534293498E-4 0.0 0.0 4.421946845544296 0.0 34 1.8615849534293498E-4 0.0 0.0 4.576551475926604 0.0 35 1.8615849534293498E-4 0.0 0.0 4.755853133357741 0.0 36 2.1718491123342412E-4 0.0 0.0 4.925319416951592 0.0 37 2.1718491123342412E-4 0.0 0.0 5.1024181988545045 0.0 38 2.1718491123342412E-4 0.0 0.0 5.298877464273082 0.0 39 2.1718491123342412E-4 0.0 0.0 5.57336816565624 0.0 40 2.1718491123342412E-4 0.0 0.0 5.783075710660056 0.0 41 2.1718491123342412E-4 0.0 0.0 5.989339323500028 0.0 42 2.1718491123342412E-4 0.0 0.0 6.195044460853971 0.0 43 2.1718491123342412E-4 0.0 0.0 6.378131341023748 0.0 44 2.1718491123342412E-4 0.0 0.0 6.568199164768885 0.0 45 2.482113271239133E-4 0.0 0.0 6.75566076957922 0.0 46 2.482113271239133E-4 0.0 0.0 6.975576005411007 0.0 47 2.482113271239133E-4 0.0 0.0 7.202906554640621 0.0 48 3.102641589048916E-4 0.0 0.0 7.403088989966057 0.0 49 3.102641589048916E-4 0.0 0.0 7.607273832941367 0.0 50 3.102641589048916E-4 0.0 0.0 7.821418155417523 0.0 51 3.412905747953808E-4 0.0 0.0 8.042884712043834 0.0 52 3.412905747953808E-4 0.0 0.0 8.294633050579263 0.0 53 3.412905747953808E-4 0.0 0.0 8.517278611009413 0.0 54 3.412905747953808E-4 0.0 0.0 8.750659311337673 0.0 55 3.412905747953808E-4 0.0 0.0 8.979292970034688 0.0 56 3.412905747953808E-4 0.0 0.0 9.216148628942681 0.0 57 3.7231699068586996E-4 0.0 0.0 9.452321706701085 0.0 58 4.0334340657635913E-4 0.0 0.0 9.672454127444105 0.0 59 4.0334340657635913E-4 0.0 0.0 9.913560405329097 0.0 60 4.0334340657635913E-4 0.0 0.0 10.153208441667235 0.0 61 4.0334340657635913E-4 0.0 0.0 10.407438893473904 0.0 62 4.0334340657635913E-4 0.0 0.0 10.691175466792426 0.0 63 4.0334340657635913E-4 0.0 0.0 10.976091043914789 0.0 64 4.0334340657635913E-4 0.0 0.0 11.245214175348892 0.0 65 4.3436982246684825E-4 0.0 0.0 11.492742921323215 3.1026415890489166E-5 66 4.3436982246684825E-4 0.0 0.0 11.734531780357797 3.1026415890489166E-5 67 4.3436982246684825E-4 0.0 0.0 11.988203756678436 3.1026415890489166E-5 68 4.3436982246684825E-4 0.0 0.0 12.272436752651208 3.1026415890489166E-5 69 4.3436982246684825E-4 0.0 0.0 12.647204830192425 3.1026415890489166E-5 70 4.3436982246684825E-4 0.0 0.0 12.925170490155319 3.1026415890489166E-5 71 4.3436982246684825E-4 0.0 0.0 13.196837787692441 3.1026415890489166E-5 72 4.3436982246684825E-4 0.0 0.0 13.472228255136423 3.1026415890489166E-5 73 4.3436982246684825E-4 0.0 0.0 13.749759545276849 3.1026415890489166E-5 74 4.3436982246684825E-4 0.0 0.0 14.038336239474289 3.1026415890489166E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9455 0.0 71.66579 1 TACGGGA 1740 0.0 70.344826 4 CTAGCGG 535 0.0 68.037384 2 TAGCGGG 2415 0.0 67.08075 3 TAGGGAC 4165 0.0 66.650665 5 CGTAAGG 655 0.0 66.56489 2 TAGGGAT 5540 0.0 65.41517 5 ACGGGAT 2165 0.0 65.2194 5 CGGGATT 2105 0.0 64.03801 6 CTACGGG 620 0.0 63.870968 3 GTAGGGA 5660 0.0 62.89753 4 CGGGATC 1115 0.0 62.780266 6 TTAGGGA 5425 0.0 62.67281 4 AGGGATT 6695 0.0 62.55415 6 GCGTAAG 275 0.0 62.545456 1 ACGGGAC 1320 0.0 61.818184 5 GAGGGAT 5650 0.0 61.522125 5 TAAGGGA 5185 0.0 61.099323 4 GCGGGAT 2510 0.0 60.87649 5 CGTTAGG 390 0.0 60.51282 2 >>END_MODULE