##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547274_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5027359 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.003005355296885 33.0 31.0 34.0 31.0 34.0 2 32.435000166091186 34.0 31.0 34.0 31.0 34.0 3 32.509827724656226 34.0 31.0 34.0 31.0 34.0 4 36.07861065820046 37.0 35.0 37.0 35.0 37.0 5 36.05030832291865 37.0 35.0 37.0 35.0 37.0 6 36.10207526456734 37.0 36.0 37.0 35.0 37.0 7 36.34174842099003 37.0 37.0 37.0 35.0 37.0 8 36.343595911889324 37.0 37.0 37.0 35.0 37.0 9 38.14253109833612 39.0 39.0 39.0 37.0 39.0 10-11 37.67210835748949 39.0 37.5 39.0 35.0 39.0 12-13 37.16078949205736 39.0 37.0 39.0 33.5 39.0 14-15 38.32532757258831 40.0 37.0 41.0 33.0 41.0 16-17 38.466151909978976 40.0 37.0 41.0 34.0 41.0 18-19 38.23579706561636 40.0 37.0 41.0 34.0 41.0 20-21 37.996189550020205 40.0 35.0 41.0 34.0 41.0 22-23 37.83277492218082 40.0 35.0 41.0 33.5 41.0 24-25 37.78811031796218 40.0 35.0 41.0 34.0 41.0 26-27 37.761424139394066 40.0 35.0 41.0 34.0 41.0 28-29 37.65110468538252 40.0 35.0 41.0 33.0 41.0 30-31 37.42589429161514 40.0 35.0 41.0 33.0 41.0 32-33 36.96200559777012 40.0 35.0 41.0 31.5 41.0 34-35 36.492310773907334 40.0 35.0 41.0 30.0 41.0 36-37 36.25942418275679 40.0 35.0 41.0 30.0 41.0 38-39 36.14531098733947 39.5 35.0 41.0 29.0 41.0 40-41 36.01718635967712 39.0 35.0 41.0 28.5 41.0 42-43 35.9603731303056 39.0 35.0 41.0 28.0 41.0 44-45 35.84238503755152 39.0 35.0 41.0 27.5 41.0 46-47 35.723673204957116 39.0 35.0 41.0 27.0 41.0 48-49 35.62361609743804 39.0 35.0 41.0 27.0 41.0 50-51 35.40125352098388 38.0 35.0 40.0 26.5 41.0 52-53 35.20693926970404 38.0 35.0 40.0 26.0 41.0 54-55 35.00020149744627 37.5 34.5 40.0 25.5 41.0 56-57 34.704584355324535 37.0 34.0 40.0 25.0 41.0 58-59 34.42906285387616 36.5 34.0 40.0 25.0 41.0 60-61 34.068916502680636 36.0 34.0 39.5 23.5 41.0 62-63 33.70437957583694 35.5 33.5 39.0 22.5 40.5 64-65 33.34465004388984 35.0 33.0 39.0 22.0 40.0 66-67 33.01108812798131 35.0 33.0 38.0 20.5 40.0 68-69 32.490043082262474 35.0 32.5 37.0 18.5 40.0 70-71 32.17781940776459 35.0 32.0 37.0 18.5 39.0 72-73 31.927144450993055 35.0 32.0 36.0 18.0 39.0 74-75 31.633807034667704 35.0 32.0 36.0 17.5 38.0 76-77 29.721371797796817 33.0 29.0 34.5 13.0 36.0 78-79 30.80405924860349 34.0 31.0 35.0 15.0 36.5 80-81 30.886264338791 34.5 31.0 35.0 15.0 36.0 82-83 30.691029823014432 34.0 31.0 35.0 11.5 36.0 84-85 30.467130256661598 34.0 31.0 35.0 10.5 36.0 86 30.046768492164574 34.0 30.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 3.0 9 9.0 10 12.0 11 38.0 12 76.0 13 233.0 14 773.0 15 2561.0 16 6591.0 17 15885.0 18 36717.0 19 59772.0 20 69455.0 21 66039.0 22 54607.0 23 44393.0 24 39516.0 25 40210.0 26 45737.0 27 53710.0 28 65455.0 29 80486.0 30 100561.0 31 126626.0 32 153265.0 33 194378.0 34 434191.0 35 415060.0 36 430892.0 37 802781.0 38 1188403.0 39 497893.0 40 1029.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.363596472820024 22.946640572117488 30.32777249446479 16.3619904605977 2 33.51767796968548 24.033394074304223 30.09255953274871 12.356368423261598 3 27.623549462053536 23.76042769175625 35.49903637277545 13.116986473414768 4 25.65609497949122 26.196478111071837 34.615809215136615 13.531617694300326 5 23.091607342940897 31.179790422764714 32.34055892964875 13.388043304645638 6 22.16205367470276 39.104289150625604 28.83134067012123 9.902316504550402 7 86.14914908603104 2.815951675621335 9.605659750974617 1.4292394873729926 8 87.14036534888398 2.11094930757879 9.276242257614783 1.4724430859224495 9 82.39952627214409 4.780482157729336 10.682567129182539 2.1374244409440424 10-11 34.690510464838496 26.656978345886976 24.615916627398203 14.036594561876326 12-13 28.51429547800346 22.040439125194762 30.89682873254128 18.5484366642605 14-15 18.709226852508447 27.913055343769962 35.39061960763096 17.98709819609063 16-17 24.77147544068367 25.843479648061734 32.03079390192743 17.35425100932716 18-19 23.606470116814812 26.58251579009973 31.80384571700569 18.007168376079765 20-21 25.283951275411205 26.879699659403677 31.852807806245785 15.983541258939335 22-23 22.309506840470313 22.658019847001178 34.96468026253944 20.06779304998907 24-25 20.790438876555264 26.65343771948651 33.85291362721461 18.703209776743616 26-27 20.010019177066926 29.684442666616807 31.288187296749648 19.017350859566623 28-29 18.64363575388191 27.155669607044175 34.40174055602554 19.798954083048375 30-31 21.869683466010684 26.268494054234043 32.68578989485334 19.176032584901932 32-33 23.42011978854106 26.47296522886072 31.122732631586487 18.984182351011732 34-35 20.44227396531658 27.709310196466973 31.470778195867847 20.3776376423486 36-37 21.98328187821876 28.546409755102033 30.43543339554625 19.034874971132954 38-39 21.220177433121446 28.790364881441725 29.5585415722251 20.43091611321173 40-41 21.32937989906828 27.087074943325113 29.822318239059513 21.761226918547095 42-43 21.208749961958155 26.896060138136146 29.941993400511084 21.95319649939461 44-45 20.80907689305657 28.376777946432707 29.190346263316385 21.623798897194334 46-47 20.85988886013511 28.063919843400882 29.74821372414423 21.32797757231978 48-49 21.265041943493593 26.423575479690232 31.11844608670278 21.192936490113397 50-51 19.798228055724685 28.09510918158023 30.390210844302146 21.716451918392938 52-53 21.252053016305382 26.44450097954015 30.79012260711837 21.513323397036096 54-55 20.85205174327117 26.6163307613401 31.329421670503336 21.202195824885393 56-57 21.076284784913906 26.727383105125373 30.225193784649157 21.97113832531156 58-59 21.97814001347427 27.780092887736878 29.424256354081734 20.817510744707114 60-61 22.5091345177458 28.227862780438002 28.7863866495311 20.476616052285106 62-63 21.353209508212963 27.33571443773958 30.062235460009916 21.248840594037546 64-65 20.639564431344567 29.048383057585504 29.60437080383557 20.707681707234354 66-67 20.52143083475837 28.774392280320544 28.233820182724166 22.47035670219692 68-69 19.83780151765569 29.57670220089713 28.353823548308366 22.23167273313881 70-71 20.238240396200073 28.732740192216234 29.409158963980893 21.619860447602807 72-73 20.973338088646543 29.321011290421072 28.374172204531245 21.331478416401136 74-75 20.205380200618254 29.863085170563707 27.852934314020544 22.07860031479749 76-77 21.82091034278634 28.243427612788345 28.32165954331091 21.614002501114403 78-79 19.71972759454815 28.761303897334567 29.212296157883294 22.30667235023399 80-81 19.198241064543033 28.699412554384917 29.26614152679369 22.83620485427836 82-83 19.470282508171785 28.61943020182167 29.741013124385983 22.169274165620557 84-85 19.0868306798858 28.38040808305116 28.942651598980696 23.59010963808234 86 19.506902132909147 28.385997498885594 29.11695783014501 22.990142538060244 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1306.0 1 1761.5 2 15345.5 3 18545.0 4 9157.5 5 10924.5 6 12939.5 7 13729.0 8 14511.0 9 15674.0 10 16179.5 11 16598.5 12 16997.0 13 17289.5 14 17478.0 15 17714.5 16 17972.5 17 18213.5 18 18368.0 19 18427.0 20 19591.5 21 20632.0 22 21713.5 23 24015.0 24 26364.0 25 28896.5 26 33973.5 27 40502.5 28 48782.5 29 54207.0 30 58049.0 31 65989.5 32 78995.0 33 92043.5 34 103767.0 35 116751.5 36 122154.0 37 126293.0 38 138425.0 39 157049.5 40 179284.5 41 199124.0 42 220492.5 43 233625.0 44 235761.5 45 244402.0 46 255728.5 47 263270.0 48 262454.0 49 245934.0 50 232949.0 51 221151.0 52 199684.5 53 178593.0 54 165693.0 55 153949.5 56 133441.5 57 123200.0 58 113576.5 59 89476.0 60 66007.5 61 49451.0 62 36019.0 63 25534.5 64 20917.0 65 16929.5 66 10854.0 67 7464.5 68 5209.5 69 3480.0 70 2230.0 71 1756.0 72 1406.0 73 944.5 74 566.5 75 243.0 76 168.5 77 111.0 78 57.5 79 44.0 80 62.0 81 54.0 82 23.0 83 16.0 84 11.0 85 7.0 86 6.0 87 7.0 88 6.0 89 2.5 90 0.5 91 0.5 92 0.5 93 0.0 94 1.0 95 1.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 5027359.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.530359972854768 #Duplication Level Percentage of deduplicated Percentage of total 1 79.54722582583923 14.740387293947702 2 8.214545352759718 3.0443696479995768 3 2.6992389438415727 1.5005360784639796 4 1.3135374051730873 0.9736128382266757 5 0.797762500827139 0.7391413156585867 6 0.5630361613907475 0.6259957648982943 7 0.412523318883457 0.5350943917275051 8 0.31305061638636555 0.4640752489090737 9 0.25889144125066604 0.4317616440239421 >10 3.050100790219449 13.676706378351597 >50 1.350468060068906 18.189175878756522 >100 1.4750330648653116 43.05436178979048 >500 0.0028392733537350332 0.3494296512156344 >1k 0.0016380423194614485 0.47962598987194544 >5k 0.0 0.0 >10k+ 1.0920282129742989E-4 1.1957260881585206 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59090 1.1753686179960492 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.945579776578517E-5 0.0 0.0 0.033496712687516444 0.0 2 9.945579776578517E-5 0.0 0.0 0.10418989373943655 0.0 3 1.1934695731894221E-4 0.0 0.0 0.16151621557163512 0.0 4 1.1934695731894221E-4 0.0 0.0 0.2588834415843388 0.0 5 1.1934695731894221E-4 0.0 0.0 0.5071648951268449 0.0 6 1.1934695731894221E-4 0.0 0.0 0.76759984715633 0.0 7 1.1934695731894221E-4 0.0 0.0 0.9652582996360515 0.0 8 1.1934695731894221E-4 0.0 0.0 1.2958692625690746 0.0 9 1.1934695731894221E-4 0.0 0.0 1.445271761972837 0.0 10 1.1934695731894221E-4 0.0 0.0 1.675671063077055 0.0 11 1.1934695731894221E-4 1.9891159553157036E-5 0.0 1.990448663005765 0.0 12 1.591292764252563E-4 1.9891159553157036E-5 0.0 2.204895254148351 0.0 13 1.591292764252563E-4 1.9891159553157036E-5 0.0 2.2885972535480357 0.0 14 1.591292764252563E-4 1.9891159553157036E-5 0.0 2.3328550835538104 0.0 15 1.7902043597841331E-4 1.9891159553157036E-5 0.0 2.387933704356502 0.0 16 1.7902043597841331E-4 1.9891159553157036E-5 0.0 2.4972356261011 0.0 17 1.7902043597841331E-4 1.9891159553157036E-5 0.0 2.636433960654093 0.0 18 1.7902043597841331E-4 1.9891159553157036E-5 0.0 2.8010333059564676 0.0 19 1.7902043597841331E-4 1.9891159553157036E-5 0.0 2.9207581953069197 0.0 20 1.7902043597841331E-4 1.9891159553157036E-5 0.0 3.0552622162053673 0.0 21 1.7902043597841331E-4 1.9891159553157036E-5 0.0 3.224814460236478 0.0 22 1.7902043597841331E-4 1.9891159553157036E-5 0.0 3.4165055648502523 0.0 23 1.7902043597841331E-4 1.9891159553157036E-5 0.0 3.608355798740452 0.0 24 1.7902043597841331E-4 1.9891159553157036E-5 0.0 3.7571018898789603 0.0 25 1.9891159553157034E-4 1.9891159553157036E-5 0.0 3.8966980476230164 0.0 26 1.9891159553157034E-4 1.9891159553157036E-5 0.0 4.028297959226704 0.0 27 1.9891159553157034E-4 1.9891159553157036E-5 0.0 4.176288186302192 0.0 28 2.188027550847274E-4 1.9891159553157036E-5 0.0 4.328336209926524 0.0 29 2.188027550847274E-4 1.9891159553157036E-5 0.0 4.514815830737371 0.0 30 2.188027550847274E-4 1.9891159553157036E-5 0.0 4.714960678161237 0.0 31 2.3869391463788442E-4 1.9891159553157036E-5 0.0 4.892469386013611 0.0 32 2.3869391463788442E-4 1.9891159553157036E-5 0.0 5.060728704673766 0.0 33 2.3869391463788442E-4 1.9891159553157036E-5 0.0 5.227456404048328 0.0 34 2.3869391463788442E-4 1.9891159553157036E-5 0.0 5.408804105694461 0.0 35 2.3869391463788442E-4 1.9891159553157036E-5 0.0 5.606880272524799 0.0 36 2.3869391463788442E-4 1.9891159553157036E-5 0.0 5.793081417101901 0.0 37 2.5858507419104147E-4 1.9891159553157036E-5 0.0 5.992370944664982 0.0 38 2.5858507419104147E-4 1.9891159553157036E-5 0.0 6.219169945890079 0.0 39 2.5858507419104147E-4 1.9891159553157036E-5 0.0 6.5822830635329606 0.0 40 2.5858507419104147E-4 5.9673478659471105E-5 0.0 6.820280787586484 0.0 41 2.5858507419104147E-4 5.9673478659471105E-5 0.0 7.068462785331224 0.0 42 2.5858507419104147E-4 5.9673478659471105E-5 0.0 7.30293977414384 0.0 43 2.5858507419104147E-4 5.9673478659471105E-5 0.0 7.5225779579297996 0.0 44 2.5858507419104147E-4 5.9673478659471105E-5 0.0 7.7355128209463455 0.0 45 2.5858507419104147E-4 5.9673478659471105E-5 0.0 7.947671928740319 0.0 46 2.5858507419104147E-4 5.9673478659471105E-5 0.0 8.177951882887218 0.0 47 2.5858507419104147E-4 5.9673478659471105E-5 0.0 8.418615022320864 0.0 48 2.5858507419104147E-4 5.9673478659471105E-5 0.0 8.660392066689488 0.0 49 2.5858507419104147E-4 5.9673478659471105E-5 0.0 8.896858171457419 0.0 50 2.5858507419104147E-4 5.9673478659471105E-5 0.0 9.140644222940912 0.0 51 2.5858507419104147E-4 5.9673478659471105E-5 0.0 9.396086493922555 0.0 52 2.5858507419104147E-4 5.9673478659471105E-5 0.0 9.693141070689402 0.0 53 2.5858507419104147E-4 5.9673478659471105E-5 0.0 9.940408075094696 0.0 54 2.5858507419104147E-4 5.9673478659471105E-5 0.0 10.194895570417788 0.0 55 2.5858507419104147E-4 5.9673478659471105E-5 0.0 10.444867772522313 0.0 56 2.5858507419104147E-4 5.9673478659471105E-5 0.0 10.704805445562968 1.9891159553157036E-5 57 2.5858507419104147E-4 5.9673478659471105E-5 0.0 10.965140941794688 1.9891159553157036E-5 58 2.7847623374419847E-4 5.9673478659471105E-5 0.0 11.222751349167625 1.9891159553157036E-5 59 2.7847623374419847E-4 5.9673478659471105E-5 0.0 11.48551356686483 1.9891159553157036E-5 60 2.7847623374419847E-4 5.9673478659471105E-5 0.0 11.77156833239878 1.9891159553157036E-5 61 2.983673932973555E-4 5.9673478659471105E-5 0.0 12.062575996661467 1.9891159553157036E-5 62 3.182585528505126E-4 5.9673478659471105E-5 0.0 12.391993490021301 1.9891159553157036E-5 63 3.381497124036696E-4 5.9673478659471105E-5 0.0 12.71357386651719 1.9891159553157036E-5 64 3.5804087195682663E-4 5.9673478659471105E-5 0.0 13.015700688970094 1.9891159553157036E-5 65 3.5804087195682663E-4 5.9673478659471105E-5 0.0 13.304261740607743 1.9891159553157036E-5 66 3.5804087195682663E-4 5.9673478659471105E-5 0.0 13.584190028999322 1.9891159553157036E-5 67 3.779320315099837E-4 5.9673478659471105E-5 0.0 13.87022490337372 1.9891159553157036E-5 68 3.978231910631407E-4 5.9673478659471105E-5 0.0 14.193993307420456 1.9891159553157036E-5 69 4.1771435061629773E-4 5.9673478659471105E-5 0.0 14.633568042385674 1.9891159553157036E-5 70 4.376055101694548E-4 5.9673478659471105E-5 0.0 14.961036202109298 1.9891159553157036E-5 71 4.5749666972261184E-4 5.9673478659471105E-5 0.0 15.270622209394634 1.9891159553157036E-5 72 4.972789888289258E-4 5.9673478659471105E-5 0.0 15.57547412070632 1.9891159553157036E-5 73 5.171701483820829E-4 5.9673478659471105E-5 0.0 15.8755720448848 1.9891159553157036E-5 74 5.370613079352399E-4 5.9673478659471105E-5 0.0 16.19749057109309 1.9891159553157036E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34150 0.0 76.322105 1 CGTAAGG 1045 0.0 65.454544 2 TAGCGCG 360 0.0 64.44444 1 TAGGGAT 8050 0.0 63.15528 5 TAACGGG 1435 0.0 62.160282 3 GGGCGAT 3680 0.0 60.54348 7 CGAGGGA 3240 0.0 60.49383 4 TACGGGA 2110 0.0 60.473934 4 ATAGGGA 7960 0.0 60.301502 4 AGGGATC 7215 0.0 59.986137 6 GTACGGG 1860 0.0 59.78495 3 AGGGATT 9165 0.0 59.39989 6 TTGCGGG 3590 0.0 59.387184 3 TAAGGGA 7160 0.0 59.385475 4 AAGGGAT 9100 0.0 59.252747 5 GCGGGAT 3755 0.0 59.2277 5 TACGGGT 695 0.0 58.705036 4 GTAGGGA 7325 0.0 58.593857 4 GGCGATT 1300 0.0 58.461544 8 TAGGGAC 4925 0.0 58.39594 5 >>END_MODULE