##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547272_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1283484 Sequences flagged as poor quality 0 Sequence length 86 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12969776015907 33.0 31.0 34.0 31.0 34.0 2 32.560800913762854 34.0 31.0 34.0 31.0 34.0 3 32.66456691318318 34.0 31.0 34.0 31.0 34.0 4 36.187742893561584 37.0 35.0 37.0 35.0 37.0 5 36.16757279405119 37.0 35.0 37.0 35.0 37.0 6 36.20464064998083 37.0 37.0 37.0 35.0 37.0 7 36.3810144886886 37.0 37.0 37.0 35.0 37.0 8 36.37146080512106 37.0 37.0 37.0 35.0 37.0 9 38.168954969442545 39.0 39.0 39.0 37.0 39.0 10-11 37.792176996363025 39.0 37.5 39.0 35.0 39.0 12-13 36.77875337752555 39.0 35.0 39.0 33.5 39.0 14-15 37.789056583486826 40.0 35.0 41.0 33.0 41.0 16-17 38.013936675486406 40.0 35.0 41.0 34.0 41.0 18-19 37.8688433202128 39.0 36.0 41.0 34.0 41.0 20-21 37.65585702665557 39.0 35.0 41.0 34.0 41.0 22-23 37.47102262279857 39.0 35.0 41.0 34.0 41.0 24-25 37.4488696392008 39.0 35.0 41.0 34.0 41.0 26-27 37.4300696385775 39.0 35.0 41.0 34.0 41.0 28-29 37.36981060924795 39.0 35.0 41.0 34.0 41.0 30-31 37.21313510725494 39.0 35.0 41.0 33.5 41.0 32-33 36.83526985922692 39.0 35.0 41.0 33.0 41.0 34-35 36.47931762296998 39.0 35.0 41.0 31.5 41.0 36-37 36.26971002365437 38.0 35.0 41.0 31.0 41.0 38-39 36.182043952242495 38.0 35.0 41.0 31.0 41.0 40-41 36.04904541077255 38.0 35.0 41.0 30.5 41.0 42-43 35.97887429839406 38.0 35.0 41.0 31.0 41.0 44-45 35.82856895761849 38.0 35.0 40.5 30.0 41.0 46-47 35.71825554506328 37.5 35.0 40.0 30.0 41.0 48-49 35.66657706679631 37.0 35.0 40.0 30.0 41.0 50-51 35.46165125548896 37.0 35.0 40.0 30.0 41.0 52-53 35.27622977769882 36.0 35.0 40.0 29.0 41.0 54-55 35.07496431587772 36.0 35.0 40.0 29.0 41.0 56-57 34.7792157907695 35.5 34.0 40.0 28.5 41.0 58-59 34.56472266113173 35.0 34.0 39.0 27.5 41.0 60-61 34.23959005332361 35.0 34.0 39.0 27.0 40.5 62-63 33.85134134901565 35.0 33.5 38.5 26.0 40.0 64-65 33.554740066880456 35.0 33.0 37.5 26.0 40.0 66-67 33.316148078199646 35.0 33.0 37.0 25.5 40.0 68-69 32.95929672672196 35.0 33.0 36.5 24.5 39.0 70-71 32.7178792256078 35.0 33.0 36.0 24.0 39.0 72-73 32.50878896815231 35.0 33.0 36.0 24.0 38.5 74-75 32.24306925524588 35.0 33.0 35.0 24.0 37.0 76-77 30.329793359325087 33.0 30.0 34.5 19.5 35.5 78-79 31.325175070355378 34.0 31.5 35.0 20.0 36.0 80-81 31.602159434788433 35.0 32.5 35.0 20.0 36.0 82-83 31.49380514287673 35.0 32.5 35.0 20.0 36.0 84-85 31.342784171832292 35.0 32.0 35.0 20.0 35.5 86 30.915918702531545 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 5.0 11 13.0 12 25.0 13 54.0 14 155.0 15 491.0 16 1339.0 17 2955.0 18 6182.0 19 9826.0 20 12043.0 21 12501.0 22 10829.0 23 8749.0 24 8424.0 25 8905.0 26 9977.0 27 11745.0 28 14689.0 29 19005.0 30 24263.0 31 30887.0 32 40381.0 33 57626.0 34 176241.0 35 155396.0 36 110664.0 37 194321.0 38 253756.0 39 101831.0 40 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.43601010998189 23.44329964378208 29.05178405028812 15.068906195947903 2 32.1061267612218 25.743133533413737 28.787892953866194 13.362846751498267 3 28.585475159799422 24.55940237665604 32.3972873834033 14.45783508014124 4 26.099663104487476 26.65861046962798 32.523740069996975 14.717986355887568 5 24.336493481804215 31.4571899610747 29.597642043064038 14.608674514057052 6 23.05560490041169 38.84208918849008 27.049187991435808 11.053117919662418 7 86.06877841874149 3.8400946174630928 7.860246017870109 2.2308809459253096 8 86.77560452642963 3.5148860445474974 7.544542822504995 2.164966606517884 9 82.6972521667586 5.305792670574779 9.064624101274344 2.932331061392273 10-11 45.40734438450343 23.6154872207211 19.352364345796286 11.624804048979184 12-13 32.75603747300317 25.982676838978904 25.45345325691633 15.807832431101595 14-15 16.914936220474893 31.426063745243415 35.578978779634184 16.080021254647505 16-17 21.086199750055318 22.927282303480215 34.345694998924806 21.640822947539665 18-19 25.22664871552742 25.32154666517074 30.60147224273929 18.85033237656254 20-21 27.52208052457218 26.04894178657467 28.917734852947135 17.511242835906017 22-23 22.267476649494657 23.799985040717296 30.279419143518737 23.65311916626931 24-25 20.2112764942921 25.15691664251366 35.27714408594108 19.354662777253164 26-27 18.0580747403162 33.40614296711139 29.510652255890996 19.02513003668141 28-29 16.427357099893726 27.011205437699264 37.30728236581056 19.254155096596453 30-31 23.34138953037202 27.572762886019614 30.476188250106738 18.609659333501625 32-33 27.791970916661214 26.932162769461872 26.911476886349966 18.36438942752695 34-35 20.46453247566779 27.327415067114195 30.67833334891592 21.52971910830209 36-37 24.337973827488305 28.184457305272215 29.42510385793668 18.052465009302804 38-39 20.84704600914386 30.68635838078231 27.42881874647444 21.03777686359939 40-41 21.577479734846712 25.34780332283067 28.830589239912612 24.244127702410005 42-43 22.535380261849777 25.637016121743628 27.20855889126783 24.619044725138764 44-45 20.225768299410042 30.959365290101005 27.10477886751997 21.71008754296898 46-47 21.52068120833606 29.72452325077679 27.57767140065634 21.17712414023081 48-49 22.17522773949656 25.284693848929944 30.943782703952678 21.59629570762082 50-51 19.444067865279195 31.31979050771182 27.86333916122055 21.372802465788432 52-53 23.25069887898875 25.927787179271423 29.478162563771733 21.34335137796809 54-55 23.346843435523933 26.40005640896186 29.96952046149387 20.283579694020336 56-57 23.350349517407306 24.025036541164518 28.64772759146199 23.976886349966186 58-59 24.686322540834166 26.30765167310227 27.58857921096017 21.41744657510339 60-61 25.850458595510347 29.15162947103353 25.511887954972558 19.486023978483566 62-63 24.535444150452985 24.898245712451423 29.827874753405574 20.738435383690017 64-65 20.60107488679251 29.929434258627296 29.625612785200282 19.843878069379905 66-67 20.042711868632566 28.115153753377527 25.57994489997538 26.26218947801453 68-69 19.588830090597156 30.952625821591855 24.497851161370146 24.960692926440846 70-71 20.515487532372823 29.224478061276958 27.91074917957684 22.34928522677338 72-73 23.211235979568112 29.86387052740821 25.889726712604133 21.035166780419544 74-75 22.47129687631478 31.797513642554172 23.699204664802988 22.031984816328055 76-77 27.954263551396043 27.209688628763583 25.37067076800334 19.46537705183703 78-79 20.792545914090084 29.559153055277665 28.556452593098157 21.091848437534086 80-81 18.178606044173513 28.019515630892165 30.23267138507375 23.569206939860567 82-83 20.30410975127076 26.489928974572337 30.316700480878612 22.889260793278297 84-85 17.66348470257518 27.433727261111162 28.660894876757325 26.241893159556334 86 19.711893564703573 26.106441529461993 30.80381212387533 23.377852781959106 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 524.0 1 712.0 2 2724.5 3 2996.5 4 1648.0 5 2126.0 6 2676.5 7 2953.0 8 3019.0 9 3046.0 10 2977.5 11 2951.0 12 3012.0 13 3168.0 14 3266.0 15 3253.0 16 3556.5 17 3627.5 18 3500.0 19 3422.5 20 3320.5 21 3414.0 22 3693.5 23 4467.5 24 5882.5 25 6242.0 26 6244.5 27 7559.0 28 9997.0 29 11684.0 30 13127.5 31 15915.5 32 17793.5 33 18891.0 34 20809.5 35 23855.5 36 25547.0 37 27451.5 38 31280.0 39 34237.0 40 40163.0 41 49078.0 42 56700.5 43 60301.0 44 64151.5 45 68801.5 46 74582.5 47 78574.0 48 74245.0 49 66825.0 50 62744.0 51 55578.0 52 46093.5 53 43060.0 54 40713.0 55 39720.5 56 39166.0 57 37972.0 58 35898.0 59 29238.0 60 21330.0 61 15539.5 62 11822.5 63 9821.5 64 9069.0 65 7272.0 66 4576.0 67 3312.0 68 2365.0 69 1700.5 70 1444.0 71 1270.0 72 998.0 73 564.5 74 296.5 75 157.0 76 105.0 77 56.5 78 20.5 79 14.0 80 27.0 81 23.5 82 5.0 83 3.0 84 2.0 85 1.5 86 2.0 87 1.0 88 1.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1283484.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.285196694858037 #Duplication Level Percentage of deduplicated Percentage of total 1 81.15970449312356 14.028614558601946 2 7.3982284296962995 2.557596672015825 3 2.28208190881397 1.1833870400287965 4 1.0605895769737017 0.7332999780202685 5 0.6728599085117465 0.581525793335486 6 0.4488241676372832 0.4654808411409827 7 0.3448047861679244 0.4172012985168729 8 0.2727946049264783 0.37722467227602136 9 0.20530186892293226 0.3193814867539363 >10 2.8916538050371705 12.589076690459649 >50 1.4818066621579624 18.846846268705473 >100 1.776349826901016 46.722309134597204 >500 0.004090877288154848 0.44273330077766704 >1k 4.5454192090609426E-4 0.12319535325987256 >5k 4.5454192090609426E-4 0.6121269115099918 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7791 0.6070196434080986 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1568 0.12216747540288776 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.79129307416376E-5 0.0 0.0 0.028204480928472813 0.0 2 7.79129307416376E-5 0.0 0.0 0.10868853838458446 0.0 3 7.79129307416376E-5 0.0 0.0 0.16081228905074002 0.0 4 7.79129307416376E-5 0.0 0.0 0.2507238111265898 0.0 5 7.79129307416376E-5 0.0 0.0 0.42213225875819255 0.0 6 7.79129307416376E-5 0.0 0.0 0.558324061694575 0.0 7 7.79129307416376E-5 0.0 0.0 0.6520533173767651 0.0 8 7.79129307416376E-5 0.0 0.0 0.8564968476428222 0.0 9 7.79129307416376E-5 0.0 0.0 0.930280393055153 0.0 10 7.79129307416376E-5 0.0 0.0 1.099896843279698 0.0 11 7.79129307416376E-5 0.0 0.0 1.3672940215849982 0.0 12 7.79129307416376E-5 0.0 0.0 1.5607518286164845 0.0 13 7.79129307416376E-5 0.0 0.0 1.631574682660633 0.0 14 7.79129307416376E-5 0.0 0.0 1.6604803799657806 0.0 15 7.79129307416376E-5 0.0 0.0 1.7115912625322949 0.0 16 7.79129307416376E-5 0.0 0.0 1.8092940776823085 0.0 17 7.79129307416376E-5 0.0 0.0 1.9216445238117499 0.0 18 7.79129307416376E-5 0.0 0.0 2.064147274138205 0.0 19 7.79129307416376E-5 0.0 0.0 2.1620838280804437 0.0 20 7.79129307416376E-5 0.0 0.0 2.262357769944931 0.0 21 7.79129307416376E-5 0.0 0.0 2.3865509815471015 0.0 22 7.79129307416376E-5 0.0 0.0 2.5127699293485546 0.0 23 1.558258614832752E-4 0.0 0.0 2.64529982454008 0.0 24 1.558258614832752E-4 0.0 0.0 2.746586634504209 0.0 25 1.558258614832752E-4 0.0 0.0 2.832602510042977 0.0 26 1.558258614832752E-4 0.0 0.0 2.928357501924449 0.0 27 1.558258614832752E-4 0.0 0.0 3.025826578282238 0.0 28 1.558258614832752E-4 0.0 0.0 3.129294950307133 0.0 29 1.558258614832752E-4 0.0 0.0 3.255280159316361 0.0 30 1.558258614832752E-4 0.0 0.0 3.39653630275095 0.0 31 1.558258614832752E-4 0.0 0.0 3.528988285011734 0.0 32 1.558258614832752E-4 0.0 0.0 3.6395467337341176 0.0 33 1.558258614832752E-4 0.0 0.0 3.7603117763836558 0.0 34 1.558258614832752E-4 0.0 0.0 3.8872319405617834 0.0 35 1.558258614832752E-4 0.0 0.0 4.036980593447211 0.0 36 1.558258614832752E-4 0.0 0.0 4.163277454179405 0.0 37 1.558258614832752E-4 0.0 0.0 4.31006541569665 0.0 38 1.558258614832752E-4 0.0 0.0 4.460437372028011 0.0 39 1.558258614832752E-4 0.0 0.0 4.696669378036656 0.0 40 1.558258614832752E-4 0.0 0.0 4.851949849004741 0.0 41 1.558258614832752E-4 0.0 0.0 5.0232024707748595 0.0 42 1.558258614832752E-4 0.0 0.0 5.186741712401557 0.0 43 1.558258614832752E-4 0.0 0.0 5.3255046420524135 0.0 44 1.558258614832752E-4 0.0 0.0 5.469253999270735 0.0 45 1.558258614832752E-4 0.0 0.0 5.616665264233913 0.0 46 1.558258614832752E-4 0.0 0.0 5.7873724954888415 0.0 47 1.558258614832752E-4 0.0 0.0 5.949275565569964 0.0 48 1.558258614832752E-4 0.0 0.0 6.109776202897738 0.0 49 1.558258614832752E-4 0.0 0.0 6.277211091061517 0.0 50 1.558258614832752E-4 0.0 0.0 6.452203533507235 0.0 51 1.558258614832752E-4 0.0 0.0 6.61893720529434 0.0 52 1.558258614832752E-4 0.0 0.0 6.820420044192215 0.0 53 1.558258614832752E-4 0.0 0.0 6.994945009053483 0.0 54 1.558258614832752E-4 0.0 0.0 7.180066132495614 0.0 55 1.558258614832752E-4 0.0 0.0 7.360902044746954 0.0 56 1.558258614832752E-4 0.0 0.0 7.551087508687292 0.0 57 1.558258614832752E-4 0.0 0.0 7.728806903708967 0.0 58 1.558258614832752E-4 0.0 0.0 7.901461958232436 0.0 59 1.558258614832752E-4 0.0 0.0 8.087440123912724 0.0 60 1.558258614832752E-4 0.0 0.0 8.291572002455815 0.0 61 1.558258614832752E-4 0.0 0.0 8.508169949917567 0.0 62 1.558258614832752E-4 0.0 0.0 8.748920905909229 0.0 63 1.558258614832752E-4 0.0 0.0 9.024343116080917 0.0 64 1.558258614832752E-4 0.0 0.0 9.250836005746859 0.0 65 1.558258614832752E-4 0.0 0.0 9.460889267026312 0.0 66 1.558258614832752E-4 0.0 0.0 9.665099058500145 0.0 67 1.558258614832752E-4 0.0 0.0 9.869620501696943 0.0 68 1.558258614832752E-4 0.0 0.0 10.124395785222099 0.0 69 1.558258614832752E-4 0.0 0.0 10.47321197615241 0.0 70 1.558258614832752E-4 0.0 0.0 10.69869199771871 0.0 71 1.558258614832752E-4 0.0 0.0 10.905862480560724 0.0 72 1.558258614832752E-4 0.0 0.0 11.115292438394246 0.0 73 1.558258614832752E-4 0.0 0.0 11.34342149960576 0.0 74 1.558258614832752E-4 0.0 0.0 11.597651392615724 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 265 0.0 75.471695 80 CGTTTTT 4850 0.0 73.896904 1 CGGGTAT 100 0.0 72.00001 6 GATACGT 40 3.7143764E-9 70.00001 9 CTAGCGG 200 0.0 70.00001 2 TAGGGCG 225 0.0 69.333336 5 CGTTAGG 295 0.0 69.15254 2 ACGGGAT 580 0.0 66.89655 5 GTTGACG 60 0.0 66.66667 1 GACTTCG 30 3.7958362E-6 66.66667 1 AGGGATC 1370 0.0 64.81751 6 AAGTACT 4050 0.0 64.49383 80 CGTAAGG 170 0.0 63.52941 2 GAGGGAT 1810 0.0 63.42541 5 GCGTAGG 265 0.0 63.396225 2 TAGCACG 120 0.0 63.333336 1 CGGGATA 285 0.0 63.157898 6 AGCGGGA 950 0.0 63.157894 4 CGTAGGG 580 0.0 62.758625 3 ATAGGGA 1405 0.0 62.63345 4 >>END_MODULE