##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547269_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2782862 Sequences flagged as poor quality 0 Sequence length 86 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13589067657685 33.0 31.0 34.0 31.0 34.0 2 32.58787931273631 34.0 31.0 34.0 31.0 34.0 3 32.7412530696815 34.0 31.0 34.0 31.0 34.0 4 36.24657672568744 37.0 37.0 37.0 35.0 37.0 5 36.22379298721963 37.0 37.0 37.0 35.0 37.0 6 36.27772056250004 37.0 37.0 37.0 35.0 37.0 7 36.43796745939971 37.0 37.0 37.0 35.0 37.0 8 36.43532305949774 37.0 37.0 37.0 35.0 37.0 9 38.2738529614476 39.0 39.0 39.0 37.0 39.0 10-11 37.81301803682683 39.0 37.5 39.0 35.0 39.0 12-13 37.09611364128009 39.0 35.0 39.0 34.0 39.0 14-15 38.22628251059521 40.0 36.0 41.0 33.5 41.0 16-17 38.379400595502034 40.0 36.0 41.0 35.0 41.0 18-19 38.27409569716357 40.0 36.0 41.0 34.0 41.0 20-21 38.10525836351209 40.0 35.0 41.0 34.0 41.0 22-23 37.941254363313746 40.0 35.0 41.0 34.0 41.0 24-25 37.94063377918129 40.0 35.0 41.0 34.0 41.0 26-27 37.944408130909835 40.0 35.0 41.0 34.0 41.0 28-29 37.88541634475587 40.0 35.0 41.0 34.0 41.0 30-31 37.752569836377084 40.0 35.0 41.0 34.0 41.0 32-33 37.4374674346051 40.0 35.0 41.0 33.5 41.0 34-35 37.14876842617421 40.0 35.0 41.0 33.0 41.0 36-37 36.992818185019594 40.0 35.0 41.0 33.0 41.0 38-39 36.909917380021 39.0 35.0 41.0 33.0 41.0 40-41 36.78864079498013 39.0 35.0 41.0 32.0 41.0 42-43 36.75164435031273 39.0 35.0 41.0 32.0 41.0 44-45 36.6241718058603 39.0 35.0 41.0 32.0 41.0 46-47 36.494036894391456 39.0 35.0 41.0 32.0 41.0 48-49 36.409680573452796 38.0 35.0 41.0 32.0 41.0 50-51 36.20350901338263 38.0 35.0 40.0 31.0 41.0 52-53 36.020078969061345 38.0 35.0 40.0 31.0 41.0 54-55 35.82966384966268 37.0 35.0 40.0 31.0 41.0 56-57 35.53431269678482 37.0 35.0 40.0 30.5 41.0 58-59 35.27698876192927 36.0 35.0 40.0 30.0 41.0 60-61 34.890446418112006 36.0 34.5 39.0 29.0 41.0 62-63 34.44516436675624 35.0 34.0 39.0 27.5 40.5 64-65 34.03313189802441 35.0 34.0 38.5 27.0 40.0 66-67 33.675189067945155 35.0 34.0 37.5 26.0 40.0 68-69 33.15024640100731 35.0 33.5 37.0 24.5 39.5 70-71 32.811243424934474 35.0 33.0 36.5 24.0 39.0 72-73 32.51607176352978 35.0 33.0 36.0 23.0 38.5 74-75 32.19785584049802 35.0 33.0 35.5 21.5 37.5 76-77 30.308695328765854 33.0 30.0 34.5 19.0 35.5 78-79 31.24226749296228 34.0 31.5 35.0 19.0 36.0 80-81 31.364536581404323 35.0 32.0 35.0 18.5 36.0 82-83 31.14733734550977 35.0 32.0 35.0 17.5 36.0 84-85 30.901319936094566 34.0 32.0 35.0 15.0 35.5 86 30.522484765683675 34.0 31.0 35.0 15.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 9.0 12 24.0 13 91.0 14 232.0 15 657.0 16 1699.0 17 4381.0 18 10580.0 19 18158.0 20 21706.0 21 21333.0 22 18059.0 23 15154.0 24 14501.0 25 15864.0 26 18785.0 27 23838.0 28 30524.0 29 41134.0 30 54729.0 31 70528.0 32 88386.0 33 117162.0 34 321724.0 35 298669.0 36 238706.0 37 447269.0 38 635988.0 39 252624.0 40 340.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.572518507924574 24.13163139242981 31.318584967562174 13.977265132083444 2 28.3226045704027 26.222787906838356 32.22236675767609 13.232240765082853 3 28.655822674642152 24.736440398409982 32.80712446395114 13.800612462996728 4 26.388408767664366 26.9886900608079 32.53865984012143 14.0842413314063 5 24.55540375340207 31.81185412715399 29.715702754933588 13.91703936451035 6 22.14604964241849 41.0920484019689 25.80325578487183 10.958646170740769 7 89.61256433125322 3.0613806936887276 5.87521048474556 1.4508444903124913 8 90.33908257038976 2.255268137622347 5.79475374632303 1.6108955456648588 9 86.51503380332909 3.787503656307787 7.467096823342301 2.230365717020822 10-11 40.986258032198506 23.971993580709356 21.62949510252395 13.412253284568191 12-13 30.898118555645233 25.45947301734689 25.522411819199082 18.119996607808794 14-15 17.65788242464053 30.39809376102732 33.87526941688089 18.068754397451254 16-17 23.516365525850723 24.636669011974003 31.336013068560355 20.510952393614918 18-19 25.675886910669664 26.687938532345477 28.522704323822023 19.11347023316284 20-21 27.036788026139995 27.33011913634237 28.219832675856726 17.413260161660908 22-23 22.594041673643897 23.519869113164795 31.251046584415615 22.6350426287757 24-25 21.005551119674635 25.92309643812737 32.89622338441504 20.17512905778296 26-27 19.003044347869206 32.10753892934684 28.496310632722714 20.393106090061238 28-29 16.8699885226073 28.34405730503345 33.974268217396336 20.811685954962915 30-31 22.903273680117806 27.83366548538878 29.24897102335653 20.014089811136877 32-33 25.51102066864976 27.236995582245903 27.849566381660317 19.40241736744402 34-35 19.61919060305542 28.217658655010563 29.292325670478807 22.870825071455215 36-37 22.26781277691815 29.19268005384385 28.539683246959424 19.999823922278576 38-39 20.60637573835857 30.151566983917995 27.07419555838558 22.16786171933786 40-41 20.97784582922186 26.16346049498682 27.535662925434316 25.323030750357006 42-43 21.166770037465028 25.791163916859695 27.63739272734329 25.404673318331987 44-45 20.017431694421067 30.214362048854742 26.60735602412193 23.160850232602264 46-47 21.03672406321262 28.993676294404825 27.441227771984384 22.52837187039817 48-49 21.255886925043356 25.628813070860147 30.313217112454733 22.80208289164177 50-51 19.295261496976853 29.264009498135373 28.184958506745932 23.255770498141842 52-53 22.03262324901486 25.589465090256002 29.628993460689028 22.7489182000401 54-55 21.483188889711382 26.417066315181998 30.15857415854613 21.941170636560493 56-57 22.05159652185412 25.18464803500856 28.55605128820617 24.207704154931147 58-59 23.16677938036453 27.655270006202247 27.314865056190353 21.86308555724287 60-61 24.155833095568518 28.23007393108246 26.14339122816726 21.47070174518176 62-63 22.288654629658243 26.000301128837865 29.82399055360992 21.887053687893975 64-65 19.655627911121716 29.933500116067556 28.717521745598596 21.69335022721213 66-67 19.11740503122325 29.654650500096665 25.544798843780253 25.683145624899833 68-69 18.824972276742432 31.207081055402675 25.41994536559844 24.548001302256452 70-71 19.29668089901691 29.428785904583123 28.293138502735673 22.981394693664292 72-73 21.33222919426116 30.678219042122823 26.329225092728276 21.66032667088774 74-75 20.30700767770734 31.95573477951835 24.631728055505448 23.10552948726886 76-77 23.541681190084166 28.243315694418193 25.312717626673546 22.902285488824095 78-79 18.848167821473 29.872968907549136 27.818034095833717 23.46082917514415 80-81 17.296168476913337 29.394127340845504 28.347902267521707 24.96180191471945 82-83 18.871004023914946 28.432491442263398 29.08662017735698 23.609884356464676 84-85 17.36440757752271 28.05124724114958 27.794982288018595 26.78936289330912 86 17.618911753439445 28.826797735568633 28.858276120051947 24.696014390939975 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 988.0 1 1219.5 2 4084.0 3 4543.0 4 2706.0 5 3472.5 6 4194.5 7 4487.0 8 4736.0 9 4988.5 10 5034.5 11 4996.0 12 4933.5 13 5054.0 14 5156.0 15 5245.0 16 5421.0 17 5495.0 18 5521.0 19 5840.5 20 6248.0 21 6375.0 22 6807.5 23 8034.5 24 9657.0 25 9779.5 26 10574.0 27 12968.0 28 18439.5 29 23017.0 30 25410.5 31 29979.0 32 36128.0 33 40549.5 34 46653.0 35 56438.0 36 60567.0 37 62020.5 38 70001.0 39 83943.5 40 100200.5 41 119683.0 42 138114.0 43 145904.0 44 150494.0 45 153818.0 46 157456.0 47 167043.5 48 168905.0 49 155316.0 50 144549.0 51 131878.0 52 112253.0 53 102589.5 54 98167.5 55 90953.5 56 82424.5 57 79397.0 58 68676.0 59 51165.0 60 37836.5 61 26678.5 62 19534.5 63 13753.5 64 10497.0 65 8382.5 66 5106.0 67 3575.0 68 2527.5 69 1574.0 70 1082.5 71 866.0 72 649.5 73 483.0 74 362.0 75 196.5 76 167.5 77 95.0 78 37.0 79 17.0 80 18.0 81 18.5 82 15.0 83 9.0 84 5.0 85 2.0 86 0.0 87 1.5 88 2.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2782862.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.50893828173348 #Duplication Level Percentage of deduplicated Percentage of total 1 76.71750746680544 13.432421033647241 2 10.114445202084278 3.5418639359453796 3 3.4495125117140235 1.8119190500900484 4 1.673792951917975 1.172253499661293 5 0.9461237996333255 0.8282811607329534 6 0.6033129685782364 0.6338021718843451 7 0.4613791356303399 0.5654781167161813 8 0.3444650610708833 0.48249739956029203 9 0.26723554845483005 0.4211109652122734 >10 2.5771781359118116 10.698781649941676 >50 1.187011572727322 15.224808290380631 >100 1.650581939414457 49.55135528129688 >500 0.005383232152358876 0.6380679284957159 >1k 0.0018634265142780724 0.5060388735794386 >5k 0.0 0.0 >10k+ 2.0704739047534138E-4 0.4913206428556581 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13553 0.48701660376978806 No Hit CTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGC 2946 0.1058622382281263 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.593422886222888E-5 0.0 0.0 0.11056962220907827 0.0 2 3.593422886222888E-5 0.0 0.0 0.3127715280168402 0.0 3 3.593422886222888E-5 0.0 0.0 0.45180105948480376 0.0 4 3.593422886222888E-5 0.0 0.0 0.6654300500707545 0.0 5 3.593422886222888E-5 0.0 0.0 1.1239148761239328 0.0 6 3.593422886222888E-5 0.0 0.0 1.4812807821587992 0.0 7 3.593422886222888E-5 0.0 0.0 1.723513418919084 0.0 8 3.593422886222888E-5 0.0 0.0 2.1938206062679355 0.0 9 3.593422886222888E-5 0.0 0.0 2.3410431419164874 0.0 10 3.593422886222888E-5 0.0 0.0 2.6672900057566635 0.0 11 3.593422886222888E-5 0.0 0.0 3.1904564437618537 0.0 12 7.186845772445777E-5 0.0 0.0 3.598309941348152 0.0 13 1.0780268658668666E-4 0.0 0.0 3.7534020731175315 0.0 14 1.0780268658668666E-4 0.0 0.0 3.821317765667144 0.0 15 1.0780268658668666E-4 0.0 0.0 3.931995190562809 0.0 16 1.0780268658668666E-4 0.0 0.0 4.163878769410772 0.0 17 1.0780268658668666E-4 0.0 0.0 4.438811554435685 0.0 18 1.0780268658668666E-4 0.0 0.0 4.778318148726024 0.0 19 1.0780268658668666E-4 0.0 0.0 4.986449202296053 0.0 20 1.0780268658668666E-4 0.0 0.0 5.223327638955866 0.0 21 1.0780268658668666E-4 0.0 0.0 5.513819945078125 0.0 22 1.0780268658668666E-4 0.0 0.0 5.811786570803727 0.0 23 1.0780268658668666E-4 0.0 0.0 6.093187517023841 0.0 24 1.0780268658668666E-4 0.0 0.0 6.314326761441998 0.0 25 1.0780268658668666E-4 0.0 0.0 6.519475274016462 0.0 26 1.0780268658668666E-4 0.0 0.0 6.714849676340401 0.0 27 1.0780268658668666E-4 0.0 0.0 6.940265093993163 0.0 28 1.0780268658668666E-4 0.0 0.0 7.148144607961156 0.0 29 1.0780268658668666E-4 0.0 0.0 7.400438828802866 0.0 30 1.0780268658668666E-4 0.0 0.0 7.679324379002624 0.0 31 1.4373691544891553E-4 0.0 0.0 7.928312650789008 0.0 32 1.4373691544891553E-4 0.0 0.0 8.15002684286896 0.0 33 1.4373691544891553E-4 0.0 0.0 8.383060317040515 0.0 34 1.4373691544891553E-4 0.0 0.0 8.624071190019484 0.0 35 1.4373691544891553E-4 0.0 0.0 8.894332525292308 0.0 36 1.4373691544891553E-4 0.0 0.0 9.13347481837044 0.0 37 1.4373691544891553E-4 0.0 0.0 9.407365510758348 0.0 38 1.4373691544891553E-4 0.0 0.0 9.693797249019175 0.0 39 1.4373691544891553E-4 0.0 0.0 10.072292481625032 0.0 40 1.4373691544891553E-4 0.0 0.0 10.371552739589674 0.0 41 1.4373691544891553E-4 0.0 0.0 10.65521754222811 0.0 42 1.4373691544891553E-4 0.0 0.0 10.955124616312272 0.0 43 1.4373691544891553E-4 0.0 0.0 11.217624158150853 0.0 44 1.4373691544891553E-4 0.0 0.0 11.482100082576858 0.0 45 1.4373691544891553E-4 0.0 0.0 11.734969251080363 0.0 46 1.4373691544891553E-4 0.0 0.0 12.030672020387644 0.0 47 1.4373691544891553E-4 0.0 0.0 12.318612996260685 0.0 48 1.4373691544891553E-4 0.0 0.0 12.601056035117804 0.0 49 1.4373691544891553E-4 0.0 0.0 12.900927174973104 0.0 50 1.4373691544891553E-4 0.0 0.0 13.196342470449487 0.0 51 1.4373691544891553E-4 0.0 0.0 13.484463117466838 0.0 52 1.4373691544891553E-4 0.0 0.0 13.820735631159575 0.0 53 1.4373691544891553E-4 0.0 0.0 14.110617055391176 0.0 54 1.4373691544891553E-4 0.0 0.0 14.413255130868867 0.0 55 1.4373691544891553E-4 0.0 0.0 14.717833654705121 0.0 56 1.4373691544891553E-4 0.0 0.0 15.023562073864964 0.0 57 1.4373691544891553E-4 0.0 0.0 15.33611799650863 0.0 58 1.4373691544891553E-4 0.0 0.0 15.627868000641067 0.0 59 1.4373691544891553E-4 0.0 0.0 15.937441382289169 0.0 60 1.4373691544891553E-4 0.0 0.0 16.26167592931306 0.0 61 1.4373691544891553E-4 0.0 0.0 16.59298951942281 0.0 62 1.4373691544891553E-4 0.0 0.0 17.007526783577482 0.0 63 1.4373691544891553E-4 0.0 0.0 17.391879295487882 0.0 64 1.4373691544891553E-4 0.0 0.0 17.74716101624874 0.0 65 1.4373691544891553E-4 0.0 0.0 18.083685069543513 0.0 66 1.4373691544891553E-4 0.0 0.0 18.384059288602884 0.0 67 1.7967114431114442E-4 0.0 0.0 18.71641497134964 0.0 68 1.7967114431114442E-4 0.0 0.0 19.065048859770982 0.0 69 1.7967114431114442E-4 0.0 0.0 19.533954612194208 0.0 70 1.7967114431114442E-4 0.0 0.0 19.879318485789092 0.0 71 1.7967114431114442E-4 0.0 0.0 20.213399011521233 0.0 72 1.7967114431114442E-4 0.0 0.0 20.567854245018257 0.0 73 2.156053731733733E-4 0.0 0.0 20.90822326080129 0.0 74 2.8747383089783107E-4 0.0 0.0 21.288946415596605 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9135 0.0 73.25671 1 GCGTAAG 185 0.0 71.35135 1 CGTAAGG 515 0.0 68.34951 2 TAGCGGG 2115 0.0 66.38298 3 TAGGGTA 2405 0.0 66.19542 5 CGAGGGA 1145 0.0 65.67685 4 ATAGCGG 715 0.0 64.8951 2 AGGGTAA 2390 0.0 64.10042 6 TTGCGGG 2475 0.0 64.0 3 ATACGCG 25 1.2358339E-4 64.0 1 TAGTCCG 50 3.0013325E-10 64.0 1 TAGGGCG 465 0.0 63.655914 5 CGGGTAT 435 0.0 63.448277 6 TACGGGT 675 0.0 63.407406 4 TATAGCG 190 0.0 63.15789 1 GATTACG 95 0.0 63.15789 1 CGGGATC 830 0.0 62.6506 6 ACGGGTC 660 0.0 62.42424 5 ATAGGGT 1545 0.0 62.135918 4 CGCGAGG 400 0.0 62.0 2 >>END_MODULE