##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547268_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1032110 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.030431833816166 33.0 31.0 34.0 31.0 34.0 2 32.45057116005077 34.0 31.0 34.0 31.0 34.0 3 32.57516834445941 34.0 31.0 34.0 31.0 34.0 4 36.11786825047718 37.0 35.0 37.0 35.0 37.0 5 36.07204561529294 37.0 35.0 37.0 35.0 37.0 6 36.12850762031179 37.0 36.0 37.0 35.0 37.0 7 36.342675683793395 37.0 37.0 37.0 35.0 37.0 8 36.33861700787707 37.0 37.0 37.0 35.0 37.0 9 38.11835947718751 39.0 39.0 39.0 37.0 39.0 10-11 37.69381364389454 39.0 37.5 39.0 35.0 39.0 12-13 36.86114852099098 39.0 35.0 39.0 33.5 39.0 14-15 37.93442220305975 40.0 35.0 41.0 33.0 41.0 16-17 38.138986639021034 40.0 35.0 41.0 34.0 41.0 18-19 38.03119483388399 40.0 36.0 41.0 34.0 41.0 20-21 37.872825570917826 40.0 35.0 41.0 34.0 41.0 22-23 37.68723634108767 40.0 35.0 41.0 33.5 41.0 24-25 37.663234054509694 40.0 35.0 41.0 34.0 41.0 26-27 37.64620292410693 40.0 35.0 41.0 34.0 41.0 28-29 37.59322843495364 40.0 35.0 41.0 34.0 41.0 30-31 37.43878268789179 40.0 35.0 41.0 33.0 41.0 32-33 37.14990407999147 40.0 35.0 41.0 33.0 41.0 34-35 36.88158335836296 39.0 35.0 41.0 32.0 41.0 36-37 36.71528325469184 39.0 35.0 41.0 31.5 41.0 38-39 36.62264874867989 39.0 35.0 41.0 31.0 41.0 40-41 36.49612492854444 39.0 35.0 41.0 31.0 41.0 42-43 36.453393049190495 39.0 35.0 41.0 31.0 41.0 44-45 36.32947360261987 39.0 35.0 41.0 31.0 41.0 46-47 36.20979643642635 38.0 35.0 41.0 31.0 41.0 48-49 36.125091317785895 38.0 35.0 40.5 31.0 41.0 50-51 35.905391867145944 38.0 35.0 40.0 30.0 41.0 52-53 35.71767495712666 37.5 35.0 40.0 30.0 41.0 54-55 35.54002674133571 37.0 35.0 40.0 29.5 41.0 56-57 35.25329470695953 36.5 34.5 40.0 29.0 41.0 58-59 34.98032670936237 36.0 34.0 40.0 28.0 41.0 60-61 34.62855945587195 35.5 34.0 39.0 27.5 41.0 62-63 34.24979120442589 35.0 34.0 39.0 26.5 40.5 64-65 33.939308794605225 35.0 34.0 38.5 26.0 40.0 66-67 33.65009834223096 35.0 34.0 37.5 26.0 40.0 68-69 33.21155932991638 35.0 33.0 37.0 25.5 39.5 70-71 32.95726376064567 35.0 33.0 36.5 25.0 39.0 72-73 32.714056641249485 35.0 33.0 36.0 25.0 39.0 74-75 32.43785788336515 35.0 33.0 35.5 24.0 38.0 76-77 30.485130460900486 33.0 30.0 34.5 20.0 36.0 78-79 31.543211963841063 34.0 31.5 35.0 22.0 36.5 80-81 31.726619740143978 35.0 32.0 35.0 22.0 36.0 82-83 31.57791320692562 35.0 32.0 35.0 20.0 36.0 84-85 31.38628489211421 34.0 32.0 35.0 20.0 36.0 86 30.984026896357946 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 0.0 11 8.0 12 12.0 13 35.0 14 128.0 15 322.0 16 883.0 17 1901.0 18 3803.0 19 6367.0 20 7879.0 21 8051.0 22 7473.0 23 6557.0 24 6691.0 25 7417.0 26 8818.0 27 10514.0 28 12930.0 29 16399.0 30 20952.0 31 26281.0 32 33100.0 33 44649.0 34 120449.0 35 106184.0 36 89217.0 37 160725.0 38 225151.0 39 98957.0 40 252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.70929455193729 23.134646500857468 29.436106616542812 13.71995233066243 2 30.15075912451192 24.56705196151573 31.317301450426793 13.964887463545553 3 29.692959083818586 24.97640755345845 31.94436639505479 13.386266967668176 4 27.02037573514451 27.597639786456867 30.61650405480036 14.765480423598259 5 24.7764288690159 32.30866864965943 28.922692348683764 13.992210132640901 6 23.507474978442218 40.01075466762264 25.78475162531125 10.697018728623888 7 88.54763542645648 3.449147862146477 6.275881446745017 1.7273352646520235 8 89.06880080611562 2.7705380240478243 6.189068994583911 1.971592175252638 9 84.4077666140237 5.62595072230673 7.225392642257124 2.7408900214124463 10-11 41.54925347104475 27.63678290104737 19.371481721909486 11.442481905998392 12-13 31.013457867862922 24.71311197449884 27.419557992849597 16.853872164788637 14-15 17.729166464814796 30.46821559717472 35.039821336873004 16.762796601137474 16-17 23.331234073887476 24.98667777659358 32.01092906763814 19.671159081880806 18-19 24.744552421737993 26.817587272674427 29.800554204493707 18.637306101093877 20-21 27.720349575142183 26.977066397961458 28.506942089505966 16.795641937390393 22-23 22.75837846741142 23.747226555309027 31.292788559358982 22.20160641792057 24-25 20.94985030665336 25.97625253122245 33.527627869122476 19.546269293001714 26-27 19.067541250448112 31.950034395558614 29.193351483853462 19.789072870139808 28-29 17.955353596031433 27.085049074226585 34.80234664909748 20.157250680644506 30-31 22.79829669318193 27.322233095309606 30.263101801164606 19.61636841034386 32-33 26.0115200899129 26.953231729176153 28.145546501826356 18.889701679084595 34-35 20.733061398494346 27.75862068965517 30.43609692765306 21.072220984197422 36-37 23.111635387700925 28.607222098419744 29.31247638333123 18.9686661305481 38-39 21.293854337231497 29.211130596544944 28.620108321787406 20.874906744436156 40-41 21.63301392293457 26.423733904331904 28.743786999447735 23.199465173285795 42-43 21.669928592882542 25.81968007286045 28.673300326515584 23.837091007741424 44-45 20.48381470967242 29.874722655530906 28.231196287217447 21.41026634757923 46-47 21.40847390297546 28.948319462072842 28.231632287256204 21.4115743476955 48-49 21.879789944870218 26.137620990010756 30.803887182567752 21.17870188255128 50-51 20.098487564310005 29.51608840143008 28.641084768096427 21.74433926616349 52-53 21.932061505072134 25.720029841780427 30.52029337958163 21.8276152735658 54-55 22.0392206257085 25.92703297129182 30.713635174545352 21.32011122845433 56-57 22.921103370764744 24.884120878588522 29.28156882502834 22.913206925618393 58-59 23.71224966331108 27.220257530689558 28.496187421883327 20.571305384116034 60-61 24.490025288002247 27.54643400412747 27.139985079109785 20.823555628760502 62-63 22.804933582660762 25.863376965633506 30.12348489986533 21.208204551840403 64-65 20.690720950286305 28.864462121285523 30.01337066785517 20.431446260573 66-67 20.411244925443995 28.143705612773832 26.939957950218485 24.50509151156369 68-69 19.76601331253452 30.40606136942768 26.369185455038707 23.4587398629991 70-71 20.48943426572749 28.526271424557457 29.12480258887134 21.859491720843707 72-73 22.70034201780818 29.264177267926865 27.277228202420282 20.75825251184467 74-75 21.982734398465283 30.522667157570417 25.920492970710484 21.57410547325382 76-77 24.6157386325101 27.58184689616417 26.77514993556888 21.02726453575685 78-79 20.257869800699538 28.710166552014805 29.195192372905986 21.836771274379668 80-81 18.80468167152726 27.93810737227621 29.775895980079643 23.481314976116888 82-83 19.431213727219 27.45966999641511 30.915987636976677 22.19312863938921 84-85 17.957775818468964 27.089118407921635 29.494094621697297 25.459011151912105 86 19.753223978064355 27.183149082946585 30.102217786863804 22.96140915212526 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 244.0 1 403.0 2 1655.5 3 1874.0 4 1094.5 5 1353.5 6 1606.5 7 1696.0 8 1774.5 9 1846.5 10 1829.5 11 1821.5 12 1870.5 13 1969.5 14 2022.0 15 2040.5 16 2162.0 17 2214.0 18 2266.0 19 2472.5 20 2481.5 21 2387.0 22 3022.5 23 3703.5 24 4044.0 25 5211.5 26 6540.5 27 7586.5 28 9296.5 29 10417.0 30 11915.5 31 14693.0 32 16916.5 33 19123.0 34 21083.0 35 23083.5 36 24386.0 37 26166.0 38 29212.5 39 31989.0 40 36571.5 41 41751.0 42 48017.5 43 52177.0 44 52390.5 45 53518.0 46 56052.0 47 56647.0 48 55520.0 49 50176.0 50 44934.0 51 42192.5 52 37452.0 53 34551.5 54 33248.5 55 32443.5 56 29694.0 57 27348.0 58 25379.5 59 19786.5 60 14560.0 61 11111.0 62 8552.0 63 6783.5 64 5727.0 65 4980.0 66 3635.5 67 2754.0 68 2186.0 69 1792.0 70 1513.0 71 1344.0 72 1016.0 73 550.0 74 294.5 75 188.0 76 140.5 77 66.0 78 44.5 79 39.0 80 38.5 81 25.0 82 11.5 83 11.5 84 9.5 85 3.5 86 0.0 87 2.0 88 3.0 89 2.0 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1032110.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.48755625388644 #Duplication Level Percentage of deduplicated Percentage of total 1 79.83408166763455 15.557711574753927 2 6.871269811900683 2.6780851399009253 3 2.05841518471716 1.203404451180891 4 1.045613320737307 0.8150579363072511 5 0.6422441896756083 0.6257884887517564 6 0.5006081412330509 0.5853377588059564 7 0.3721877800448473 0.5077121210443153 8 0.3318143635775101 0.5173000860851404 9 0.2590423519918616 0.454329216592241 >10 4.903449402791718 24.939756805256387 >50 2.477278971605672 34.76897115545666 >100 0.7029912576907411 16.81117617450619 >500 0.0 0.0 >1k 0.0010035563992730067 0.5353690913583645 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4438 0.4299929271104824 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1037 0.10047378670878103 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9377779500247066E-4 0.0 0.0 0.03768978112798054 0.0 2 1.9377779500247066E-4 0.0 0.0 0.12682756682911706 0.0 3 1.9377779500247066E-4 0.0 0.0 0.18883646122990766 0.0 4 1.9377779500247066E-4 0.0 0.0 0.30597513830890116 0.0 5 1.9377779500247066E-4 0.0 0.0 0.5697067173072637 0.0 6 1.9377779500247066E-4 0.0 0.0 0.7679414015947913 0.0 7 1.9377779500247066E-4 0.0 0.0 0.90038852447898 0.0 8 1.9377779500247066E-4 0.0 0.0 1.191927217060197 0.0 9 1.9377779500247066E-4 0.0 0.0 1.278739669221304 0.0 10 1.9377779500247066E-4 0.0 0.0 1.4484890176434682 0.0 11 1.9377779500247066E-4 0.0 0.0 1.718518374979411 0.0 12 1.9377779500247066E-4 0.0 0.0 1.9394250612822277 0.0 13 1.9377779500247066E-4 0.0 0.0 2.0172268459757197 0.0 14 1.9377779500247066E-4 0.0 0.0 2.0472624042011027 0.0 15 1.9377779500247066E-4 0.0 0.0 2.1007450756217847 0.0 16 1.9377779500247066E-4 0.0 0.0 2.216624197033262 0.0 17 1.9377779500247066E-4 0.0 0.0 2.3668019881601765 0.0 18 1.9377779500247066E-4 0.0 0.0 2.5454651151524548 0.0 19 1.9377779500247066E-4 0.0 0.0 2.6680295704915173 0.0 20 1.9377779500247066E-4 0.0 0.0 2.795438470705642 0.0 21 1.9377779500247066E-4 0.0 0.0 2.9490073732450997 0.0 22 1.9377779500247066E-4 0.0 0.0 3.1349371675499706 0.0 23 1.9377779500247066E-4 0.0 0.0 3.3195105172898236 0.0 24 1.9377779500247066E-4 0.0 0.0 3.450891862301499 0.0 25 1.9377779500247066E-4 0.0 0.0 3.566577205917974 0.0 26 1.9377779500247066E-4 0.0 0.0 3.6878821055895203 0.0 27 1.9377779500247066E-4 0.0 0.0 3.817035005958667 0.0 28 1.9377779500247066E-4 0.0 0.0 3.940471461375241 0.0 29 1.9377779500247066E-4 0.0 0.0 4.102954142484813 0.0 30 1.9377779500247066E-4 0.0 0.0 4.280648380502078 0.0 31 1.9377779500247066E-4 0.0 0.0 4.438383505634089 0.0 32 1.9377779500247066E-4 0.0 0.0 4.579841295985893 0.0 33 1.9377779500247066E-4 0.0 0.0 4.731859976165331 0.0 34 2.90666692503706E-4 0.0 0.0 4.895892879634923 0.0 35 2.90666692503706E-4 0.0 0.0 5.076590673474726 0.0 36 2.90666692503706E-4 0.0 0.0 5.234035131914234 0.0 37 2.90666692503706E-4 0.0 0.0 5.421612037476626 0.0 38 2.90666692503706E-4 0.0 0.0 5.618296499404133 0.0 39 2.90666692503706E-4 0.0 0.0 5.9048938582127874 0.0 40 2.90666692503706E-4 0.0 0.0 6.106422765015357 0.0 41 2.90666692503706E-4 0.0 0.0 6.30194456017285 0.0 42 2.90666692503706E-4 0.0 0.0 6.49804768871535 0.0 43 2.90666692503706E-4 0.0 0.0 6.679520593735164 0.0 44 2.90666692503706E-4 0.0 0.0 6.859540165292459 0.0 45 2.90666692503706E-4 0.0 0.0 7.045082404007325 0.0 46 2.90666692503706E-4 0.0 0.0 7.253974867019989 0.0 47 2.90666692503706E-4 0.0 0.0 7.465289552470183 0.0 48 2.90666692503706E-4 0.0 0.0 7.6717597930453145 0.0 49 2.90666692503706E-4 0.0 0.0 7.8866593677030545 0.0 50 2.90666692503706E-4 0.0 0.0 8.117061165960992 0.0 51 2.90666692503706E-4 0.0 0.0 8.333607851876254 0.0 52 2.90666692503706E-4 0.0 0.0 8.58735987443199 0.0 53 2.90666692503706E-4 0.0 0.0 8.805553671604772 0.0 54 2.90666692503706E-4 0.0 0.0 9.03295191404017 0.0 55 2.90666692503706E-4 0.0 0.0 9.253567933650483 0.0 56 2.90666692503706E-4 0.0 0.0 9.490655065836005 0.0 57 2.90666692503706E-4 0.0 0.0 9.72948619817655 0.0 58 2.90666692503706E-4 0.0 0.0 9.955140440456928 0.0 59 2.90666692503706E-4 0.0 0.0 10.181860460609819 0.0 60 2.90666692503706E-4 0.0 0.0 10.429508482622976 0.0 61 2.90666692503706E-4 0.0 0.0 10.690624061388805 0.0 62 2.90666692503706E-4 0.0 0.0 10.979449864839989 0.0 63 2.90666692503706E-4 0.0 0.0 11.27999922488882 0.0 64 2.90666692503706E-4 0.0 0.0 11.5529352491498 0.0 65 2.90666692503706E-4 0.0 0.0 11.797676604237921 0.0 66 2.90666692503706E-4 0.0 0.0 12.039511292401004 0.0 67 2.90666692503706E-4 0.0 0.0 12.284930869771634 0.0 68 2.90666692503706E-4 0.0 0.0 12.582089118407922 0.0 69 2.90666692503706E-4 0.0 0.0 12.962668707792774 0.0 70 3.875555900049413E-4 0.0 0.0 13.224074953251106 0.0 71 3.875555900049413E-4 0.0 0.0 13.489938087994497 0.0 72 3.875555900049413E-4 0.0 0.0 13.754929222660376 0.0 73 3.875555900049413E-4 0.0 0.0 14.013719467886174 0.0 74 3.875555900049413E-4 0.0 0.0 14.316981717065042 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 2995 0.0 72.1202 1 TACGGGA 500 0.0 72.0 4 TTAGGCG 80 0.0 70.0 1 ACGGGAT 575 0.0 67.47826 5 CGAGGGA 725 0.0 67.31035 4 TCGTTAG 30 3.7953105E-6 66.66667 1 CGGGATC 365 0.0 65.753426 6 TAGGACG 55 9.094947E-12 65.454544 1 GGGCGAT 745 0.0 64.96644 7 TTAGGGA 1625 0.0 64.49231 4 AGGGATT 2300 0.0 62.260864 6 ACGTAGG 155 0.0 61.935486 2 TAGGGAC 885 0.0 61.920906 5 AGGGACC 1015 0.0 61.871925 6 TAGCGGG 670 0.0 61.492535 3 GGCGATA 215 0.0 61.395348 8 AGGGATC 1450 0.0 61.24138 6 CGTATGG 105 0.0 60.952377 2 TAAGGGA 1575 0.0 60.698414 4 TCTAGCG 60 2.1827873E-11 60.000004 1 >>END_MODULE