##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547267_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2257276 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00082577407459 33.0 31.0 34.0 31.0 34.0 2 32.418091540423056 34.0 31.0 34.0 31.0 34.0 3 32.507165716553935 34.0 31.0 34.0 31.0 34.0 4 36.06349290029221 37.0 35.0 37.0 35.0 37.0 5 36.02974603017088 37.0 35.0 37.0 35.0 37.0 6 36.08939092959833 37.0 35.0 37.0 35.0 37.0 7 36.324720149419036 37.0 36.0 37.0 35.0 37.0 8 36.320688741651445 37.0 37.0 37.0 35.0 37.0 9 38.099853097273 39.0 39.0 39.0 37.0 39.0 10-11 37.650886732504134 39.0 37.5 39.0 35.0 39.0 12-13 36.96007444371003 39.0 35.0 39.0 33.5 39.0 14-15 38.09769164249299 40.0 36.0 41.0 33.0 41.0 16-17 38.260125257168376 40.0 36.0 41.0 34.0 41.0 18-19 38.088962980158385 40.0 36.0 41.0 34.0 41.0 20-21 37.86969205360798 40.0 35.0 41.0 34.0 41.0 22-23 37.67030305554128 40.0 35.0 41.0 33.0 41.0 24-25 37.626110409183454 40.0 35.0 41.0 33.0 41.0 26-27 37.58421167814658 40.0 35.0 41.0 33.5 41.0 28-29 37.4857170766889 40.0 35.0 41.0 33.0 41.0 30-31 37.309156257365075 40.0 35.0 41.0 33.0 41.0 32-33 36.90894135232023 39.5 35.0 41.0 31.5 41.0 34-35 36.53241982814684 39.0 35.0 41.0 31.0 41.0 36-37 36.286381018537384 39.0 35.0 41.0 30.0 41.0 38-39 36.18679372836995 39.0 35.0 41.0 30.0 41.0 40-41 36.07035559674581 39.0 35.0 41.0 30.0 41.0 42-43 36.01808839503897 39.0 35.0 41.0 30.0 41.0 44-45 35.87725980340906 39.0 35.0 41.0 29.0 41.0 46-47 35.742165114057826 38.0 35.0 41.0 29.0 41.0 48-49 35.64145345983388 38.0 35.0 40.5 28.0 41.0 50-51 35.41107844144889 38.0 35.0 40.0 27.5 41.0 52-53 35.22187650070262 37.5 35.0 40.0 27.0 41.0 54-55 35.01631036700873 37.0 34.5 40.0 26.5 41.0 56-57 34.744050793965826 36.5 34.0 40.0 26.0 41.0 58-59 34.49028630083339 36.0 34.0 40.0 26.0 41.0 60-61 34.11895842599664 35.5 34.0 39.0 25.5 41.0 62-63 33.73970684134328 35.0 33.5 39.0 24.0 40.5 64-65 33.39226926614202 35.0 33.0 38.5 23.0 40.0 66-67 33.076430839649205 35.0 33.0 38.0 22.0 40.0 68-69 32.62027018406256 35.0 33.0 37.0 20.5 39.5 70-71 32.31197492021357 35.0 33.0 36.5 19.5 39.0 72-73 32.04336642927139 35.0 32.5 36.0 19.0 39.0 74-75 31.733636028558315 35.0 32.0 36.0 18.5 38.0 76-77 29.77480622662005 33.0 29.0 34.5 14.0 36.0 78-79 30.793907346731196 34.0 30.5 35.0 15.5 37.0 80-81 30.937892397739574 34.5 31.0 35.0 15.0 36.0 82-83 30.74986355235248 34.5 31.0 35.0 13.5 36.0 84-85 30.51719063153996 34.0 31.0 35.0 11.0 36.0 86 30.07470375798086 34.0 30.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 13.0 10 15.0 11 20.0 12 42.0 13 116.0 14 436.0 15 1227.0 16 3049.0 17 7072.0 18 15602.0 19 23221.0 20 25426.0 21 23788.0 22 20548.0 23 18025.0 24 17122.0 25 18655.0 26 21579.0 27 25739.0 28 31510.0 29 39117.0 30 47819.0 31 59466.0 32 73281.0 33 94231.0 34 232077.0 35 221214.0 36 189949.0 37 334567.0 38 488531.0 39 223310.0 40 502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.71570512422938 23.76541459706301 29.636606245758163 14.88227403294945 2 32.34735140939788 24.197749854249103 30.9616103657683 12.493288370584722 3 28.329012491161915 24.065377915682443 34.866493951116304 12.739115642039343 4 25.953937400654592 26.754282595482344 33.72613716709875 13.565642836764313 5 24.408224780664835 30.949516142465523 31.222677244608104 13.41958183226154 6 21.63337580340198 40.47187849425591 27.50983929302398 10.384906409318134 7 86.52340254359679 3.47064337723876 8.3066935545321 1.6992605246323444 8 87.0266196955977 3.0528832096739613 8.221236570095993 1.6992605246323444 9 82.4996588808812 5.792955757293304 9.291198772325583 2.4161865894999104 10-11 38.33018204242636 28.25046649147025 21.58344836874179 11.835903097361598 12-13 28.649841667567454 25.87647677997728 29.181588782231326 16.292092770223935 14-15 17.268933883140562 31.50398976465439 34.936622725798706 16.29045362640634 16-17 21.928576744713542 26.973241198683723 32.67006338613444 18.4281186704683 18-19 23.59100083463431 28.39909696466006 30.601884749583125 17.408017451122504 20-21 25.48675926204859 28.512175737481815 30.077336577361386 15.923728423108209 22-23 21.12781068863533 25.452868856090262 32.29587343328862 21.123447021985793 24-25 19.588853999245107 28.30783652508599 33.75008195719088 18.353227518478025 26-27 19.018587004867815 33.76082499437375 29.058032779332255 18.16255522142618 28-29 17.418538982384078 28.686744554055423 34.68908985875011 19.205626604810398 30-31 21.823560787426967 29.196584733103087 30.691328840602566 18.288525638867377 32-33 24.677509529184736 29.029502816669293 28.255627579436453 18.037360074709515 34-35 19.994652847059907 29.602737990391958 29.67213579553409 20.730473367014046 36-37 22.8524336412561 29.579701374577144 29.319121808764194 18.248743175402566 38-39 20.44151889268304 30.940855260942833 28.56250188280033 20.055123963573795 40-41 20.72136947364877 28.47053262427811 28.810300556954488 21.99779734511863 42-43 21.12422229271033 27.942861218566094 28.720767863566525 22.212148625157045 44-45 20.153206785523793 31.395296809074303 27.6350787409249 20.816417664477008 46-47 20.881407501785336 30.43336304466091 28.086529959118867 20.598699494434886 48-49 21.323046007665877 27.534647956209163 30.28052395896647 20.861782077158487 50-51 19.574278909623814 30.912657557161815 28.75755999709384 20.75550353612053 52-53 21.71147879125105 28.08396049043183 29.61290511217946 20.591655606137664 54-55 21.753166205639012 28.466833475392466 29.66008587341557 20.119914445552958 56-57 21.68682518221077 27.394235352699447 29.20991938956512 21.70902007552466 58-59 22.950981625640818 28.540284838894316 28.250820900944323 20.257912634520547 60-61 23.057215865494516 30.24616839057342 26.93751229357863 19.759103450353436 62-63 21.85809356055706 27.964945358919337 29.705671792018347 20.47128928850526 64-65 19.650919958392326 30.979729550130337 29.54031762177067 19.829032869706673 66-67 19.271746122317342 30.234052016678508 26.17590848438561 24.318293376618545 68-69 19.064505182352534 32.004969706850204 25.948776312688395 22.98174879810887 70-71 19.488157407423813 30.248405600378508 28.3868698378045 21.87656715439317 72-73 21.544485477185777 30.684572910003034 27.032316827893442 20.73862478491775 74-75 21.026981193261257 31.96097863088076 25.68135221390738 21.3306879619506 76-77 24.067659426671796 29.387035524233635 26.016557124605054 20.52874792448952 78-79 19.621880532110385 30.387799276650263 28.793776215225787 21.196543976013565 80-81 17.879382051641006 29.68013215929288 29.6068801511202 22.833605637945915 82-83 19.506653151852056 28.49040170541839 29.824576170570193 22.17836897215936 84-85 18.049454298012293 28.73259627976375 28.682115080300324 24.53583434192363 86 18.737628894295604 28.536031925205425 29.964567912829448 22.761771267669527 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 670.0 1 1087.5 2 6427.0 3 7320.5 4 3629.5 5 5043.5 6 7055.5 7 7991.0 8 8160.0 9 7944.0 10 7153.5 11 6522.5 12 6234.0 13 6338.0 14 6505.0 15 6572.5 16 6899.5 17 7052.5 18 7181.5 19 7528.0 20 8119.5 21 8600.0 22 9279.0 23 10309.5 24 11283.5 25 12672.5 26 17212.5 27 21140.0 28 23682.0 29 26070.0 30 30728.0 31 36658.0 32 40917.5 33 46384.5 34 53306.0 35 58332.5 36 58917.0 37 58708.5 38 64040.5 39 72245.5 40 81694.0 41 95436.0 42 104392.0 43 106390.0 44 112707.5 45 116561.5 46 120497.5 47 128032.5 48 123845.0 49 106063.5 50 93605.0 51 87772.0 52 76445.5 53 69035.5 54 63746.0 55 57966.0 56 53195.0 57 50831.0 58 43946.5 59 32454.0 60 24596.0 61 19315.5 62 15572.5 63 11622.5 64 9385.0 65 7802.0 66 5614.5 67 4529.5 68 3263.5 69 2128.0 70 1754.0 71 1730.0 72 1274.5 73 810.5 74 656.0 75 378.0 76 222.0 77 144.5 78 92.5 79 94.0 80 69.0 81 50.5 82 40.0 83 16.5 84 8.0 85 4.0 86 2.0 87 3.0 88 4.0 89 3.0 90 1.5 91 1.5 92 1.5 93 1.0 94 0.5 95 0.5 96 1.0 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2257276.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.40143356813122 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7228479588745 16.26460386495204 2 7.99883351643524 3.2637534121619 3 2.6725693526359686 1.6357273831207855 4 1.3905468579911464 1.134765973867199 5 0.8927580665655479 0.910677219372515 6 0.6199782855544428 0.7589067483853713 7 0.45625144700093356 0.6515728510447303 8 0.3882589077548395 0.6336830651036438 9 0.2991436143978368 0.5492662718821317 >10 3.1114891292025026 14.860101274210763 >50 1.152310091443757 17.017678430320295 >100 1.2912839075215878 40.76797664801013 >500 0.002851484710745636 0.4217194757320169 >1k 6.58034933248993E-4 0.18893247310489977 >5k 0.0 0.0 >10k+ 2.193449777496643E-4 0.9406349087316421 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21020 0.9312108931295952 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.430118425925762E-5 0.0 0.0 0.042130426230554 0.0 2 4.430118425925762E-5 0.0 0.0 0.1402575493648096 0.0 3 4.430118425925762E-5 0.0 0.0 0.2113609501009181 0.0 4 4.430118425925762E-5 0.0 0.0 0.3226898261444325 0.0 5 8.860236851851524E-5 0.0 0.0 0.6079451515897923 0.0 6 8.860236851851524E-5 0.0 0.0 0.8661767546370049 0.0 7 8.860236851851524E-5 0.0 0.0 1.0424954679888503 0.0 8 8.860236851851524E-5 0.0 0.0 1.3759504819082824 0.0 9 8.860236851851524E-5 0.0 0.0 1.49126646453513 0.0 10 8.860236851851524E-5 0.0 0.0 1.695539225154567 0.0 11 8.860236851851524E-5 0.0 0.0 2.0342217788165913 0.0 12 8.860236851851524E-5 0.0 0.0 2.2606008303813976 0.0 13 8.860236851851524E-5 0.0 0.0 2.3439313579730614 0.0 14 8.860236851851524E-5 0.0 0.0 2.3820303764360227 0.0 15 8.860236851851524E-5 0.0 0.0 2.43948901242028 0.0 16 8.860236851851524E-5 0.0 0.0 2.569202879931386 0.0 17 8.860236851851524E-5 0.0 0.0 2.74264201630638 0.0 18 8.860236851851524E-5 0.0 0.0 2.9416429359989653 0.0 19 8.860236851851524E-5 0.0 0.0 3.0713125023258123 0.0 20 8.860236851851524E-5 0.0 0.0 3.207317138001733 0.0 21 8.860236851851524E-5 0.0 0.0 3.3795601424017265 0.0 22 8.860236851851524E-5 0.0 0.0 3.5707197524804233 0.0 23 8.860236851851524E-5 0.0 0.0 3.783232533372082 0.0 24 8.860236851851524E-5 0.0 0.0 3.939261304333187 0.0 25 8.860236851851524E-5 0.0 0.0 4.079031540671145 0.0 26 8.860236851851524E-5 0.0 0.0 4.210783262658177 0.0 27 8.860236851851524E-5 0.0 0.0 4.357154375450764 0.0 28 8.860236851851524E-5 0.0 0.0 4.516993048258166 0.0 29 8.860236851851524E-5 0.0 0.0 4.701994793724825 0.0 30 8.860236851851524E-5 0.0 0.0 4.906400457897041 0.0 31 8.860236851851524E-5 0.0 0.0 5.091003492705367 0.0 32 8.860236851851524E-5 0.0 0.0 5.260942835523879 0.0 33 8.860236851851524E-5 0.0 0.0 5.433761755319243 0.0 34 8.860236851851524E-5 0.0 0.0 5.6140232740701626 0.0 35 8.860236851851524E-5 0.0 0.0 5.8163024813979325 0.0 36 8.860236851851524E-5 0.0 0.0 5.998601854624778 0.0 37 8.860236851851524E-5 0.0 0.0 6.2077920466969925 0.0 38 8.860236851851524E-5 0.0 0.0 6.432753460365502 0.0 39 8.860236851851524E-5 0.0 0.0 6.722749012526603 0.0 40 8.860236851851524E-5 0.0 0.0 6.951165918567336 0.0 41 8.860236851851524E-5 0.0 0.0 7.181975088558067 0.0 42 8.860236851851524E-5 0.0 0.0 7.41211974078491 0.0 43 8.860236851851524E-5 0.0 0.0 7.6313220004997175 0.0 44 8.860236851851524E-5 0.0 0.0 7.841885529283969 0.0 45 8.860236851851524E-5 0.0 0.0 8.056790574125628 0.0 46 8.860236851851524E-5 0.0 0.0 8.292472874384877 0.0 47 8.860236851851524E-5 0.0 0.0 8.543704890319129 0.0 48 8.860236851851524E-5 0.0 0.0 8.787095596639489 0.0 49 8.860236851851524E-5 0.0 0.0 9.037928901915405 0.0 50 8.860236851851524E-5 0.0 0.0 9.295628890751507 0.0 51 8.860236851851524E-5 0.0 0.0 9.548765857608906 0.0 52 8.860236851851524E-5 0.0 0.0 9.823964814227415 0.0 53 8.860236851851524E-5 0.0 0.0 10.078076407138516 0.0 54 8.860236851851524E-5 0.0 0.0 10.328067989913507 0.0 55 8.860236851851524E-5 0.0 0.0 10.585236364538497 0.0 56 8.860236851851524E-5 0.0 0.0 10.851353578383858 0.0 57 1.3290355277777285E-4 0.0 0.0 11.117692298150514 0.0 58 1.3290355277777285E-4 0.0 0.0 11.3691015188218 0.0 59 1.3290355277777285E-4 0.0 0.0 11.62994689174031 0.0 60 1.3290355277777285E-4 0.0 0.0 11.905898968491226 0.0 61 1.3290355277777285E-4 0.0 0.0 12.201875180527326 0.0 62 1.3290355277777285E-4 0.0 0.0 12.506002810467129 0.0 63 1.3290355277777285E-4 0.0 0.0 12.827585107005081 0.0 64 1.3290355277777285E-4 0.0 0.0 13.11753635798192 0.0 65 1.3290355277777285E-4 0.0 0.0 13.413468268833762 0.0 66 1.7720473703703048E-4 0.0 0.0 13.680870217022642 0.0 67 1.7720473703703048E-4 0.0 0.0 13.963378869043927 0.0 68 2.2150592129628808E-4 0.0 0.0 14.278404590311508 0.0 69 2.658071055555457E-4 0.0 0.0 14.677425356934641 0.0 70 3.101082898148033E-4 0.0 0.0 14.973755978444816 0.0 71 3.9871065833331856E-4 0.0 0.0 15.271504237851286 0.0 72 3.9871065833331856E-4 0.0 0.0 15.56668302857072 0.0 73 3.9871065833331856E-4 0.0 0.0 15.86505150455682 0.0 74 3.9871065833331856E-4 0.0 0.0 16.186456596357733 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11675 0.0 74.62099 1 CTACGGG 355 0.0 69.85915 3 TAACGGG 710 0.0 69.29578 3 CACGTCG 35 1.1819975E-7 68.57143 1 GCGATAT 145 0.0 66.206894 9 TATAGCG 195 0.0 65.64103 1 GGCGATA 440 0.0 65.454544 8 AAGGGAT 3485 0.0 65.308464 5 CTAGGGA 1790 0.0 64.804474 4 ATAACGG 280 0.0 64.28571 2 TAGGGAC 2710 0.0 63.616234 5 ACGGGAT 1400 0.0 63.428577 5 CGGGATT 990 0.0 63.030304 6 TAAGGGA 2935 0.0 62.555367 4 TACGGGA 890 0.0 62.471912 4 AGCGGGA 1730 0.0 62.427742 4 ACGGGTA 135 0.0 62.22222 5 CGTTAGG 425 0.0 62.117645 2 AGGGATT 3925 0.0 61.85987 6 ATAGGGA 2955 0.0 61.725887 4 >>END_MODULE