##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547266_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3020991 Sequences flagged as poor quality 0 Sequence length 86 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99336343603804 33.0 31.0 33.0 31.0 34.0 2 32.425291237213216 33.0 31.0 34.0 31.0 34.0 3 32.54529424284945 34.0 31.0 34.0 31.0 34.0 4 36.09301649690449 37.0 35.0 37.0 35.0 37.0 5 36.06067181266015 37.0 35.0 37.0 35.0 37.0 6 36.113451182079 37.0 36.0 37.0 35.0 37.0 7 36.329626933678384 37.0 36.0 37.0 35.0 37.0 8 36.32508140540637 37.0 37.0 37.0 35.0 37.0 9 38.118960632454716 39.0 39.0 39.0 37.0 39.0 10-11 37.6641118758712 39.0 37.5 39.0 35.0 39.0 12-13 37.040605880653075 39.0 35.0 39.0 33.5 39.0 14-15 38.16970043935913 40.0 37.0 41.0 33.0 41.0 16-17 38.32692947446715 40.0 36.5 41.0 34.0 41.0 18-19 38.16875588176198 40.0 36.0 41.0 34.0 41.0 20-21 37.988720257690275 40.0 35.0 41.0 34.0 41.0 22-23 37.79994925506233 40.0 35.0 41.0 33.5 41.0 24-25 37.77450330040705 40.0 35.0 41.0 34.0 41.0 26-27 37.75925251018623 40.0 35.0 41.0 34.0 41.0 28-29 37.64871941028623 40.0 35.0 41.0 33.0 41.0 30-31 37.467643730153455 40.0 35.0 41.0 33.0 41.0 32-33 37.139068438138345 40.0 35.0 41.0 32.5 41.0 34-35 36.794288198806285 40.0 35.0 41.0 31.0 41.0 36-37 36.593548938080254 40.0 35.0 41.0 31.0 41.0 38-39 36.477860576214894 39.0 35.0 41.0 30.5 41.0 40-41 36.35256013672335 39.0 35.0 41.0 30.0 41.0 42-43 36.29877613008446 39.0 35.0 41.0 30.0 41.0 44-45 36.17771651752687 39.0 35.0 41.0 30.0 41.0 46-47 36.05049650925805 39.0 35.0 41.0 30.0 41.0 48-49 35.93677952036269 38.0 35.0 40.5 29.5 41.0 50-51 35.71540497803535 38.0 35.0 40.0 29.0 41.0 52-53 35.51952869108183 38.0 35.0 40.0 28.5 41.0 54-55 35.3228662382642 37.0 35.0 40.0 28.0 41.0 56-57 35.0323087688775 37.0 34.5 40.0 27.5 41.0 58-59 34.78752468974585 36.0 34.0 40.0 27.0 41.0 60-61 34.42957377231511 36.0 34.0 39.0 26.0 41.0 62-63 34.09185429549443 35.0 34.0 39.0 26.0 40.5 64-65 33.77343941110715 35.0 34.0 38.5 25.5 40.0 66-67 33.46681949731065 35.0 33.0 38.0 25.0 40.0 68-69 32.97596897839153 35.0 33.0 37.0 23.0 39.5 70-71 32.713471837552646 35.0 33.0 37.0 23.0 39.0 72-73 32.463990127742846 35.0 33.0 36.0 23.0 39.0 74-75 32.17330885792113 35.0 33.0 36.0 22.0 38.0 76-77 30.2620860174691 33.0 30.0 34.5 19.5 36.0 78-79 31.376113003977835 34.0 31.5 35.0 20.0 36.5 80-81 31.486370035528076 35.0 32.0 35.0 20.0 36.0 82-83 31.311979413377927 34.5 32.0 35.0 19.5 36.0 84-85 31.111682226130434 34.0 32.0 35.0 19.0 36.0 86 30.692626029008363 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 7.0 10 10.0 11 25.0 12 55.0 13 150.0 14 406.0 15 1322.0 16 3224.0 17 7375.0 18 16095.0 19 25139.0 20 29463.0 21 29694.0 22 25955.0 23 22433.0 24 21472.0 25 23156.0 26 26531.0 27 31639.0 28 38331.0 29 47597.0 30 58535.0 31 73550.0 32 92720.0 33 124314.0 34 294195.0 35 268863.0 36 279509.0 37 497664.0 38 692053.0 39 289005.0 40 500.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.554615356351604 23.220029453910985 29.589495632393476 14.635859557343931 2 31.5415040958414 24.779914935198416 30.384996181716527 13.293584787243656 3 29.22137139766388 23.821189801624698 33.566501853199824 13.390936947511594 4 26.155423832775405 26.967409038954436 32.596323524300466 14.28084360396969 5 24.739795649838083 31.71048837947548 30.09072188563289 13.458994085053547 6 22.47514143537667 40.43924659159858 26.570949731396087 10.514662241628656 7 88.01353595558543 3.1943491390739003 7.245734926055722 1.5463799792849433 8 88.57742376590993 2.453962954540414 7.290521554019856 1.6780917255298016 9 84.0714851517267 5.076744684111936 8.336966247168561 2.5148039169928014 10-11 38.027918653183676 27.206088995299886 21.648343209231673 13.117649142284767 12-13 29.334959951883338 22.554635217383964 29.05074857886038 19.05965625187232 14-15 19.188256436381305 28.305910212906955 34.04278595997141 18.46304739074032 16-17 25.54391919737596 25.66412809571429 30.62632427570953 18.165628431200226 18-19 25.40335274087212 26.843625154791923 29.20232135746184 18.55070074687412 20-21 27.20875368380773 26.957197158151086 29.419104525634136 16.414944632407046 22-23 23.650914550887443 22.098659016197004 33.40182079324301 20.84860563967254 24-25 21.727787338658075 26.371975288903542 32.07391216988068 19.826325202557705 26-27 20.629323291595377 30.356975575233424 29.11226812658495 19.90143300658625 28-29 19.3320337597828 27.642799995100948 32.619147160650265 20.406019084465992 30-31 23.25857640754309 25.89888549816931 30.785195983702035 20.057342110585566 32-33 25.17996577944125 26.55516021067259 29.167879017183434 19.096994992702726 34-35 21.34499904170519 27.410690730293467 30.11106289293811 21.133247335063228 36-37 23.576866001917914 28.470971942650607 28.45149158008084 19.50067047535064 38-39 22.520888013238043 27.849073366984545 27.88479012350583 21.74524849627159 40-41 22.234260214611695 26.441190986666296 28.327128415807923 22.997420382914083 42-43 21.601173257384744 26.591588654186655 28.737374589993813 23.069863498434785 44-45 21.821862428587174 27.88513769157207 28.069613580444297 22.223386299396456 46-47 21.549286310353125 27.62232658091335 28.835438437254528 21.992948671478995 48-49 22.306885389595664 26.39049570157607 29.786930844878384 21.515688063949874 50-51 20.70168365281459 28.233251936202393 28.827775388936942 22.237289022046077 52-53 22.03808286750937 26.164344746475578 29.544245580341023 22.253326805674032 54-55 22.30807705153706 26.066810526744373 30.062138549899686 21.562973871818883 56-57 22.164266626414975 25.889732872424975 29.02679948401038 22.91920101714967 58-59 23.167976998276394 27.39840999195297 27.96833886628593 21.465274143484706 60-61 23.625724141515153 27.689258259955096 27.13076603008748 21.554251568442275 62-63 22.535833440086385 26.014642215087697 29.215148274192142 22.234376070633775 64-65 21.641772517693695 27.914515468599543 29.106806342686887 21.336905671019874 66-67 21.34587623730094 28.288382851852255 26.989024462502538 23.37671644834427 68-69 20.822869051910452 28.908924256973954 27.102430957258726 23.16577573385687 70-71 21.1117974201181 28.204089320358783 28.23803513482827 22.446078124694843 72-73 22.218421041307305 28.448694484690616 27.543594138479726 21.78929033552235 74-75 21.227521035315895 29.498697612803216 26.4037860423947 22.869995309486193 76-77 22.884692473430075 27.469677996392573 26.870371345032147 22.775258185145205 78-79 20.89186958848934 28.160494354336045 28.004949369263265 22.94268668791135 80-81 19.733723139195053 28.01357236747809 28.429545139326795 23.82315935400006 82-83 20.34062663543188 27.705262941862458 28.771949337154595 23.182161085551066 84-85 19.673097337926528 27.3403992266114 28.109352196017795 24.877151239444277 86 20.23868988686163 27.597169273261656 28.65576229786848 23.508378542008234 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 636.0 1 916.5 2 5536.5 3 6590.5 4 3584.0 5 4412.5 6 5205.5 7 5449.0 8 5681.0 9 6052.0 10 6411.5 11 6613.0 12 6690.5 13 6832.5 14 6878.0 15 7034.0 16 7140.0 17 7367.0 18 7699.0 19 7773.0 20 8293.5 21 8795.0 22 9543.5 23 11095.5 24 12328.0 25 14158.0 26 18834.0 27 24378.5 28 29140.5 29 31633.0 30 33841.5 31 38460.0 32 43560.0 33 49165.5 34 54031.5 35 60811.5 36 65641.0 37 69984.0 38 77731.0 39 84955.0 40 94448.5 41 110670.5 42 126808.5 43 132398.0 44 136539.0 45 143275.0 46 149082.5 47 155053.0 48 155258.5 49 145310.5 50 137915.0 51 134326.5 52 124392.0 53 118278.5 54 114124.5 55 109719.5 56 102461.0 57 95221.0 58 84762.0 59 66325.5 60 50451.0 61 38674.0 62 30359.5 63 22740.5 64 19556.0 65 16668.5 66 12290.0 67 9320.0 68 7335.0 69 5919.5 70 4462.0 71 3914.0 72 3310.0 73 2247.5 74 1457.0 75 935.0 76 682.0 77 473.0 78 254.0 79 181.0 80 146.0 81 85.0 82 52.0 83 44.0 84 32.5 85 17.0 86 12.0 87 14.5 88 10.5 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3020991.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.887937449908247 #Duplication Level Percentage of deduplicated Percentage of total 1 79.84158039710614 14.28201196045255 2 7.489970805924003 2.6796025855601484 3 2.3183459785692877 1.2441128355568123 4 1.1815743897982507 0.8454371510849844 5 0.7236705971878861 0.6472487188417326 6 0.5276933830705911 0.5663607737458324 7 0.39747637449627105 0.4977022767363921 8 0.3246021438475567 0.46451702762009706 9 0.270442015070295 0.43538848644641226 >10 3.6932621619968304 16.797640633989197 >50 1.7707006724120213 22.887832697847703 >100 1.4588048074435735 37.711652121139196 >500 0.001313391154221529 0.16798109051993915 >1k 3.7525461549186537E-4 0.08763209337613609 >5k 0.0 0.0 >10k+ 1.8762730774593268E-4 0.6848795470828928 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20406 0.6754737104479953 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.324068823773391E-4 0.0 0.0 0.02310500097484567 0.0 2 1.324068823773391E-4 0.0 0.0 0.06600483086510353 0.0 3 1.324068823773391E-4 0.0 0.0 0.09943756866538166 0.0 4 1.324068823773391E-4 0.0 0.0 0.1713345057962768 0.0 5 1.324068823773391E-4 0.0 0.0 0.33710792253270533 0.0 6 1.324068823773391E-4 0.0 0.0 0.4946721125617388 0.0 7 1.324068823773391E-4 0.0 0.0 0.621451702438041 0.0 8 1.324068823773391E-4 0.0 0.0 0.8759046286466924 0.0 9 1.324068823773391E-4 0.0 3.310172059433477E-5 0.9869609012406856 0.0 10 1.324068823773391E-4 0.0 3.310172059433477E-5 1.1664053285825744 0.0 11 1.324068823773391E-4 0.0 3.310172059433477E-5 1.3856380240788535 0.0 12 1.324068823773391E-4 0.0 3.310172059433477E-5 1.559322752037328 0.0 13 1.324068823773391E-4 0.0 3.310172059433477E-5 1.6259565155937241 0.0 14 1.324068823773391E-4 0.0 3.310172059433477E-5 1.657800370805474 0.0 15 1.324068823773391E-4 0.0 3.310172059433477E-5 1.699210623268987 0.0 16 1.324068823773391E-4 0.0 3.310172059433477E-5 1.7753114789153626 0.0 17 1.324068823773391E-4 0.0 3.310172059433477E-5 1.8778275075960174 0.0 18 1.324068823773391E-4 0.0 3.310172059433477E-5 2.004938114678263 0.0 19 1.324068823773391E-4 0.0 3.310172059433477E-5 2.102753699034522 0.0 20 1.324068823773391E-4 0.0 3.310172059433477E-5 2.216226397231902 0.0 21 1.324068823773391E-4 0.0 3.310172059433477E-5 2.3504538742419294 0.0 22 1.324068823773391E-4 0.0 3.310172059433477E-5 2.5037810440348878 0.0 23 1.6550860297167387E-4 0.0 3.310172059433477E-5 2.649759631855904 0.0 24 1.6550860297167387E-4 0.0 3.310172059433477E-5 2.7611469216558406 0.0 25 1.6550860297167387E-4 0.0 3.310172059433477E-5 2.86270300043926 0.0 26 1.6550860297167387E-4 0.0 3.310172059433477E-5 2.9662782841789332 0.0 27 1.9861032356600865E-4 0.0 3.310172059433477E-5 3.077202149890549 0.0 28 1.9861032356600865E-4 0.0 3.310172059433477E-5 3.1918665100293246 0.0 29 1.9861032356600865E-4 0.0 3.310172059433477E-5 3.3527077703971977 0.0 30 2.317120441603434E-4 0.0 3.310172059433477E-5 3.5224202918843517 0.0 31 2.317120441603434E-4 0.0 3.310172059433477E-5 3.671344932838264 0.0 32 2.317120441603434E-4 0.0 3.310172059433477E-5 3.8141457554822242 0.0 33 2.317120441603434E-4 0.0 3.310172059433477E-5 3.9575755108174766 0.0 34 2.317120441603434E-4 0.0 3.310172059433477E-5 4.113815632022737 0.0 35 2.317120441603434E-4 0.0 3.310172059433477E-5 4.276278876699732 0.0 36 2.317120441603434E-4 0.0 3.310172059433477E-5 4.432221082419643 0.0 37 2.317120441603434E-4 0.0 3.310172059433477E-5 4.599914398950543 0.0 38 2.317120441603434E-4 0.0 3.310172059433477E-5 4.807230475032862 0.0 39 2.317120441603434E-4 0.0 3.310172059433477E-5 5.212958264357623 0.0 40 2.317120441603434E-4 0.0 3.310172059433477E-5 5.4212342903371775 0.0 41 2.317120441603434E-4 0.0 3.310172059433477E-5 5.632224657405467 0.0 42 2.317120441603434E-4 0.0 3.310172059433477E-5 5.820738956190204 0.0 43 2.317120441603434E-4 0.0 3.310172059433477E-5 6.000911621385168 0.0 44 2.317120441603434E-4 0.0 3.310172059433477E-5 6.1776748093589156 0.0 45 2.648137647546782E-4 0.0 3.310172059433477E-5 6.347983161816768 0.0 46 2.648137647546782E-4 0.0 3.310172059433477E-5 6.533419000586232 0.0 47 2.648137647546782E-4 0.0 3.310172059433477E-5 6.747554031110983 0.0 48 2.648137647546782E-4 0.0 3.310172059433477E-5 6.942456961970426 0.0 49 2.648137647546782E-4 0.0 3.310172059433477E-5 7.132063617534776 0.0 50 2.648137647546782E-4 0.0 3.310172059433477E-5 7.330276720453653 0.0 51 2.648137647546782E-4 0.0 3.310172059433477E-5 7.543683513125329 0.0 52 2.648137647546782E-4 0.0 3.310172059433477E-5 7.812999111880837 0.0 53 2.97915485349013E-4 0.0 3.310172059433477E-5 8.027200345846778 0.0 54 2.97915485349013E-4 0.0 3.310172059433477E-5 8.234648828811473 0.0 55 2.97915485349013E-4 0.0 3.310172059433477E-5 8.440872548114179 0.0 56 3.3101720594334774E-4 0.0 3.310172059433477E-5 8.648652048284818 0.0 57 3.3101720594334774E-4 0.0 3.310172059433477E-5 8.863151197736107 0.0 58 3.641189265376825E-4 0.0 3.310172059433477E-5 9.071559630598038 0.0 59 3.641189265376825E-4 0.0 3.310172059433477E-5 9.284900219828527 0.0 60 3.972206471320173E-4 0.0 3.310172059433477E-5 9.525682135431717 0.0 61 4.3032236772635204E-4 0.0 3.310172059433477E-5 9.783048013052671 0.0 62 4.3032236772635204E-4 0.0 3.310172059433477E-5 10.063883010575006 0.0 63 4.3032236772635204E-4 0.0 3.310172059433477E-5 10.333926847183589 0.0 64 4.3032236772635204E-4 0.0 3.310172059433477E-5 10.59440428654041 0.0 65 4.3032236772635204E-4 0.0 3.310172059433477E-5 10.834921388378847 0.0 66 4.3032236772635204E-4 0.0 3.310172059433477E-5 11.06411770177402 0.0 67 4.3032236772635204E-4 0.0 3.310172059433477E-5 11.29976885068509 0.0 68 4.634240883206868E-4 0.0 3.310172059433477E-5 11.575936505603625 0.0 69 4.965258089150216E-4 0.0 3.310172059433477E-5 12.027377771069162 0.0 70 5.296275295093564E-4 0.0 3.310172059433477E-5 12.304737087929093 0.0 71 5.296275295093564E-4 0.0 3.310172059433477E-5 12.562169168991234 0.0 72 5.296275295093564E-4 0.0 3.310172059433477E-5 12.81268299044916 0.0 73 5.627292501036911E-4 0.0 3.310172059433477E-5 13.06789725623148 0.0 74 5.627292501036911E-4 0.0 3.310172059433477E-5 13.352605155063355 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12450 0.0 73.1245 1 TACGGGA 1475 0.0 66.44068 4 GCGGGAT 2170 0.0 63.96313 5 ATAGCGG 690 0.0 63.188404 2 AGGGATT 5340 0.0 61.797756 6 TAACGGG 920 0.0 61.739132 3 TTGCGGG 2165 0.0 61.52425 3 ATAGGGA 3965 0.0 61.23581 4 TAGCGGG 2230 0.0 61.16592 3 ACGGGAT 1440 0.0 61.111115 5 TAGGGAC 3190 0.0 61.065826 5 GGGCGAT 1835 0.0 59.72752 7 TAGGGAT 4860 0.0 59.670784 5 TAAGGGA 3905 0.0 59.411015 4 TGCGGGA 2425 0.0 59.216496 4 CGTAAGG 380 0.0 58.947372 2 CGGGATT 1450 0.0 58.75862 6 TAGTAGG 1660 0.0 58.31325 2 AGGGATC 4050 0.0 58.271606 6 GTAGGGA 4285 0.0 58.156357 4 >>END_MODULE