##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547265_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4106347 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05559150261778 33.0 31.0 34.0 31.0 34.0 2 32.49307425797187 34.0 31.0 34.0 31.0 34.0 3 32.51887675347456 34.0 31.0 34.0 31.0 34.0 4 36.11194353521512 37.0 35.0 37.0 35.0 37.0 5 36.096389077688755 37.0 35.0 37.0 35.0 37.0 6 36.15159069606149 37.0 36.0 37.0 35.0 37.0 7 36.36935261437964 37.0 37.0 37.0 35.0 37.0 8 36.367968902774166 37.0 37.0 37.0 35.0 37.0 9 38.15992973803724 39.0 39.0 39.0 37.0 39.0 10-11 37.71444120528538 39.0 37.5 39.0 35.0 39.0 12-13 37.1959912301615 39.0 37.0 39.0 34.5 39.0 14-15 38.39143866799372 40.0 37.0 41.0 33.5 41.0 16-17 38.52112437161302 40.0 37.0 41.0 34.0 41.0 18-19 38.19619079926757 40.0 37.0 41.0 34.0 41.0 20-21 37.85324523231963 40.0 35.0 41.0 34.0 41.0 22-23 37.68580261239491 39.5 35.0 41.0 33.5 41.0 24-25 37.64194246126789 40.0 35.0 41.0 34.0 41.0 26-27 37.61268531373506 40.0 35.0 41.0 34.0 41.0 28-29 37.47579612731218 40.0 35.0 41.0 33.0 41.0 30-31 37.15633274538172 40.0 35.0 41.0 32.5 41.0 32-33 36.48198423075303 40.0 35.0 41.0 30.5 41.0 34-35 35.767331523614544 39.0 35.0 41.0 25.5 41.0 36-37 35.470270169569204 39.0 35.0 41.0 23.5 41.0 38-39 35.32068380972188 39.0 35.0 41.0 23.0 41.0 40-41 35.14706380147611 39.0 35.0 41.0 22.5 41.0 42-43 35.06629931664324 39.0 35.0 41.0 22.0 41.0 44-45 34.92783500761139 38.5 35.0 41.0 22.0 41.0 46-47 34.80718555933047 38.0 35.0 41.0 22.0 41.0 48-49 34.67803378525974 38.0 34.5 40.0 22.0 41.0 50-51 34.446107087394225 37.5 34.0 40.0 20.0 41.0 52-53 34.23438874016249 37.0 34.0 40.0 20.0 41.0 54-55 34.01290697059942 37.0 34.0 40.0 20.0 41.0 56-57 33.73842164337305 36.0 34.0 40.0 19.0 41.0 58-59 33.49159155327107 36.0 33.5 40.0 18.0 41.0 60-61 33.14086741816997 35.0 33.0 39.0 18.0 41.0 62-63 32.80426118396716 35.0 33.0 39.0 17.0 40.5 64-65 32.47833828948211 35.0 32.5 38.5 15.0 40.0 66-67 32.14957747116841 35.0 32.0 38.0 13.0 40.0 68-69 31.628311976557264 35.0 31.5 37.0 10.0 39.5 70-71 31.335291927350514 35.0 31.0 36.5 10.0 39.0 72-73 31.118083907667813 35.0 31.0 36.0 10.0 39.0 74-75 30.848084928039448 35.0 31.0 36.0 10.0 38.0 76-77 28.968550514605802 33.0 28.0 34.5 10.0 36.0 78-79 30.04730908030909 34.0 30.0 35.0 10.0 36.5 80-81 30.143886037882332 34.0 30.5 35.0 10.0 36.0 82-83 29.979896121784158 34.0 30.0 35.0 10.0 36.0 84-85 29.767213170245963 34.0 30.0 35.0 10.0 36.0 86 29.363703554521816 34.0 29.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 16.0 10 15.0 11 37.0 12 76.0 13 228.0 14 828.0 15 2772.0 16 7308.0 17 17956.0 18 42976.0 19 73057.0 20 85626.0 21 79142.0 22 63297.0 23 47429.0 24 38187.0 25 36122.0 26 38732.0 27 44033.0 28 52961.0 29 66150.0 30 82082.0 31 99798.0 32 113996.0 33 150398.0 34 361197.0 35 333122.0 36 337926.0 37 624989.0 38 908558.0 39 396530.0 40 796.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.667475008809536 22.00851511087592 28.80567570154203 20.51833417877252 2 36.29252471844197 23.570901338829863 28.451346172157393 11.685227770570778 3 26.33793490905664 23.08087942884515 38.3560132643442 12.225172397754013 4 24.752340705741624 25.271293439156505 37.082716097787156 12.893649757314712 5 22.728814686143185 29.811362751370012 34.89485910469817 12.56496345778864 6 21.18028505627995 37.42277503581651 31.196900797716314 10.20003911018723 7 82.5887583294836 2.849734812961496 13.177381258817144 1.384125598737759 8 83.35849357104989 2.355134624521503 12.89189637407652 1.3944754303520868 9 78.93994345826107 4.543795251594665 14.251572017659491 2.2646892724847656 10-11 34.07960895657381 24.9771634009498 28.444868395194074 12.498359247282318 12-13 27.795252081716427 21.08197383221632 33.22677065528071 17.896003430786536 14-15 17.99967221474464 26.48895721671841 38.3520316232408 17.15933894529615 16-17 23.756772138350705 24.46610089210678 35.08085166694388 16.696275302598636 18-19 23.1605487797305 26.156374509996354 33.912927962493185 16.770148747779963 20-21 24.95775442260481 25.995574655527165 34.0591528187949 14.987518103073121 22-23 21.474086335129495 22.335862020428376 37.45040299809052 18.73964864635161 24-25 20.673070249542963 25.541131813750763 35.8830488509617 17.902749085744578 26-27 19.030564148621636 28.701105873419852 33.870274479969666 18.398055497988842 28-29 18.304480843922835 26.60626342586245 36.41837867087219 18.670877059342526 30-31 21.662282802695437 25.357489272095123 34.633799822567354 18.346428102642083 32-33 24.161328791746044 25.759038386186067 32.27101849892374 17.80861432314415 34-35 20.894361825729778 27.231697662180032 32.761174347905815 19.11276616418437 36-37 22.35556322931306 29.31795583763379 30.201052176058184 18.125428756994964 38-39 21.87953185641642 28.542680392085718 29.688272812794438 19.889514938703424 40-41 21.383385281370522 27.21957009478254 30.40137621102162 20.995668412825317 42-43 21.01047476017005 27.25208074232402 30.253373618936735 21.4840708785692 44-45 20.934056474038847 28.342685116479437 29.521092591541827 21.202165817939886 46-47 20.733135801723527 28.451723636604502 30.042115291279575 20.773025270392395 48-49 21.444851104887142 26.289071527564523 31.609725140130635 20.656352227417702 50-51 19.630927439887568 28.140741637275173 30.789300076199112 21.439030846638143 52-53 21.23344666196013 26.20566406102553 31.772899367734876 20.787989909279464 54-55 20.826259933707505 26.045497372725684 32.25176781212109 20.876474881445723 56-57 21.234213767126842 26.73014482214971 30.53244160807647 21.503199802646975 58-59 22.127550350713175 27.878976131340096 29.646666489704838 20.34680702824189 60-61 23.188432443726747 28.09889178873583 28.691657085969595 20.021018681567824 62-63 21.8562751759654 27.141605422045433 30.264514908262747 20.73760449372642 64-65 21.226031312015277 29.371555789123523 29.461246212266033 19.941166686595167 66-67 21.544099901932302 29.161515088715106 27.557534713944047 21.736850295408548 68-69 20.56378820396815 29.84580942623699 28.219899584716053 21.370502785078806 70-71 20.8294622933717 29.259899370413656 29.214092233315892 20.696546102898754 72-73 21.53739077579172 30.170976783014197 28.031350005247972 20.26028243594611 74-75 20.86133977474383 29.98162356956195 27.799002373642555 21.358034282051662 76-77 22.084190644385387 28.23529039314018 28.01564261373917 21.664876348735262 78-79 20.656729691864815 29.297998927026867 28.502888333596747 21.54238304751157 80-81 19.80697198751104 28.800732134912128 28.87856286865187 22.513733008924962 82-83 20.428022765733147 29.2109751075591 28.83821070162848 21.522791425079273 84-85 19.980008995830115 28.425447240576602 28.31495974402553 23.279584019567757 86 20.172162751954474 29.208953846326185 28.59039920396401 22.02848419775533 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1010.0 1 1367.5 2 15606.0 3 19567.0 4 10369.5 5 12257.0 6 14345.0 7 15268.0 8 15891.0 9 17003.5 10 17932.5 11 18586.5 12 19001.5 13 19255.5 14 19309.0 15 19832.0 16 20651.5 17 21062.0 18 21477.0 19 21998.0 20 22301.5 21 22385.0 22 23784.5 23 26035.0 24 27451.5 25 29207.5 26 33047.0 27 38102.0 28 44288.0 29 48068.0 30 52155.0 31 60136.5 32 68142.5 33 76309.5 34 84129.5 35 92071.0 36 96248.0 37 105026.0 38 114887.5 39 122861.0 40 137516.0 41 152127.0 42 164586.5 43 170200.0 44 174594.5 45 180313.5 46 184679.0 47 189670.0 48 191368.5 49 181273.5 50 171430.0 51 163506.0 52 150830.5 53 142914.0 54 134720.5 55 124461.0 56 114526.0 57 109822.0 58 98182.0 59 75128.0 60 56521.0 61 45968.5 62 38705.5 63 29507.5 64 24213.0 65 20373.0 66 13788.0 67 9676.5 68 7554.0 69 5641.0 70 3728.0 71 2972.0 72 2744.5 73 1975.0 74 1255.5 75 755.0 76 387.5 77 267.5 78 169.5 79 147.0 80 106.0 81 57.0 82 40.0 83 27.5 84 16.0 85 8.5 86 9.0 87 7.0 88 6.0 89 8.5 90 6.5 91 2.5 92 1.0 93 0.0 94 1.0 95 1.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 4106347.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.55900440952258 #Duplication Level Percentage of deduplicated Percentage of total 1 80.00359363755206 16.447942343720854 2 7.018918450318473 2.886039507403538 3 2.3432376076794688 1.44523896926524 4 1.269880189137835 1.0442988963220048 5 0.8280386865696752 0.8511825504220619 6 0.6050982926565307 0.7464131080152121 7 0.464624151357441 0.6686546983569821 8 0.3755465826538374 0.6176691079009102 9 0.31414746112422576 0.5812703134643953 >10 4.160114219270801 21.007820223817298 >50 1.6857404832526452 24.997377077967414 >100 0.9264988518020526 26.016108351104243 >500 0.0025207662927762475 0.3564781489386113 >1k 0.0019205838421151762 0.6794925131793346 >5k 0.0 0.0 >10k+ 1.2003649013219851E-4 1.654014190121978 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67023 1.632180621851977 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.305763492466662E-5 0.0 0.0 0.01534210333417999 0.0 2 7.305763492466662E-5 0.0 0.0 0.05605955853219419 0.0 3 7.305763492466662E-5 0.0 0.0 0.10917245912242682 0.0 4 7.305763492466662E-5 0.0 0.0 0.18291196530639034 0.0 5 7.305763492466662E-5 0.0 0.0 0.3773913894758529 0.0 6 7.305763492466662E-5 0.0 0.0 0.6476072285172199 0.0 7 7.305763492466662E-5 0.0 0.0 0.8694345606934826 0.0 8 7.305763492466662E-5 0.0 0.0 1.1457385359785717 0.0 9 9.741017989955549E-5 0.0 0.0 1.3529056360799514 0.0 10 9.741017989955549E-5 0.0 0.0 1.6209053935286033 0.0 11 9.741017989955549E-5 0.0 0.0 1.927601344942354 0.0 12 9.741017989955549E-5 0.0 0.0 2.13659488591685 0.0 13 1.2176272487444437E-4 0.0 0.0 2.2257008479799687 0.0 14 1.2176272487444437E-4 0.0 0.0 2.2763784940727123 0.0 15 1.2176272487444437E-4 0.0 0.0 2.332243232245107 0.0 16 1.4611526984933325E-4 0.0 0.0 2.4231269300913927 0.0 17 1.704678148242221E-4 0.0 0.0 2.5285490972876867 0.0 18 1.704678148242221E-4 0.0 0.0 2.6570331245752 0.0 19 1.704678148242221E-4 0.0 0.0 2.7501085514692254 0.0 20 1.704678148242221E-4 0.0 0.0 2.857430217173561 0.0 21 1.704678148242221E-4 0.0 0.0 2.9772447384500142 0.0 22 1.704678148242221E-4 0.0 0.0 3.11505579046291 0.0 23 1.704678148242221E-4 0.0 0.0 3.255983968232592 0.0 24 1.704678148242221E-4 0.0 0.0 3.365132074810044 0.0 25 1.704678148242221E-4 0.0 0.0 3.467071828074929 0.0 26 1.704678148242221E-4 0.0 0.0 3.5667224421121744 0.0 27 1.704678148242221E-4 0.0 0.0 3.688874807706217 0.0 28 1.704678148242221E-4 0.0 0.0 3.8035022369030185 0.0 29 1.704678148242221E-4 0.0 0.0 3.942189980535011 0.0 30 1.704678148242221E-4 0.0 0.0 4.0813647750665005 0.0 31 1.9482035979911098E-4 0.0 0.0 4.206609913872354 0.0 32 1.9482035979911098E-4 0.0 0.0 4.324938929905339 0.0 33 1.9482035979911098E-4 0.0 0.0 4.447627051488829 0.0 34 1.9482035979911098E-4 0.0 0.0 4.5834655473587596 0.0 35 1.9482035979911098E-4 0.0 0.0 4.7308715020917615 0.0 36 1.9482035979911098E-4 0.0 0.0 4.8725546087556655 0.0 37 1.9482035979911098E-4 0.0 0.0 5.024490136853997 0.0 38 2.1917290477399987E-4 0.0 0.0 5.208546671774207 0.0 39 2.1917290477399987E-4 0.0 0.0 5.4948108379540255 0.0 40 2.1917290477399987E-4 0.0 0.0 5.690434831737308 0.0 41 2.1917290477399987E-4 0.0 0.0 5.905078163145979 0.0 42 2.1917290477399987E-4 0.0 0.0 6.10084827219911 0.0 43 2.1917290477399987E-4 0.0 0.0 6.265349713504484 0.0 44 2.4352544974888874E-4 0.0 0.0 6.420767655534226 0.0 45 2.678779947237776E-4 0.0 0.0 6.577695455352409 0.0 46 2.678779947237776E-4 0.0 0.0 6.753082484261559 0.0 47 2.678779947237776E-4 0.0 0.0 6.939696036404133 0.0 48 3.1658308467355533E-4 0.0 0.0 7.117177384181122 0.0 49 3.1658308467355533E-4 0.0 0.0 7.295657186302083 0.0 50 3.1658308467355533E-4 0.0 0.0 7.4780333956190255 0.0 51 3.1658308467355533E-4 0.0 0.0 7.671587423079442 0.0 52 3.1658308467355533E-4 0.0 0.0 7.887350971556958 0.0 53 3.1658308467355533E-4 0.0 0.0 8.076813771461593 0.0 54 3.1658308467355533E-4 0.0 0.0 8.266520096815977 0.0 55 3.409356296484442E-4 0.0 0.0 8.44928594685252 0.0 56 3.652881746233331E-4 0.0 0.0 8.63891921457198 0.0 57 3.652881746233331E-4 0.0 0.0 8.835273784704507 0.0 58 3.652881746233331E-4 0.0 0.0 9.021327228312659 0.0 59 3.652881746233331E-4 0.0 0.0 9.21824190697961 0.0 60 3.8964071959822196E-4 0.0 0.0 9.423095515308376 0.0 61 3.8964071959822196E-4 0.0 0.0 9.655053506194191 0.0 62 4.1399326457311085E-4 0.0 0.0 9.947016167898134 0.0 63 4.1399326457311085E-4 0.0 0.0 10.197409035329942 0.0 64 4.1399326457311085E-4 0.0 0.0 10.42439910704088 0.0 65 4.1399326457311085E-4 0.0 0.0 10.639699957163874 0.0 66 4.1399326457311085E-4 0.0 0.0 10.848157742148922 0.0 67 4.1399326457311085E-4 0.0 0.0 11.06238708029302 0.0 68 4.3834580954799974E-4 0.0 0.0 11.309808937237891 0.0 69 4.3834580954799974E-4 0.0 0.0 11.6584399710984 0.0 70 4.8705089949777747E-4 0.0 0.0 11.918232920890514 0.0 71 4.8705089949777747E-4 0.0 0.0 12.159469231411764 0.0 72 5.114034444726664E-4 0.0 0.0 12.3868489438423 0.0 73 5.114034444726664E-4 0.0 0.0 12.611817754320324 0.0 74 5.357559894475552E-4 0.0 0.0 12.854953563349614 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 42390 0.0 76.744514 1 CGTAAGG 715 0.0 64.33566 2 CGAGGGA 2235 0.0 62.28188 4 CGGGATA 1035 0.0 62.222225 6 TAGGGAT 6005 0.0 61.54871 5 ACGGGAT 1940 0.0 61.03093 5 GGCGATA 735 0.0 59.863945 8 ATAGGGA 5840 0.0 59.24658 4 TACGGGA 1980 0.0 58.585854 4 TAGGGAC 4115 0.0 58.323204 5 CGTAGGG 1955 0.0 58.312016 3 ACGGGAC 1290 0.0 57.984493 5 TAGCGGG 2915 0.0 57.907375 3 ATAGCGG 1000 0.0 57.6 2 GGGCGAT 3270 0.0 57.49235 7 ACGGGTA 565 0.0 57.34513 5 GCGGGAT 2680 0.0 57.16418 5 GCGGGTC 910 0.0 57.142857 5 GTAGGGA 5370 0.0 57.057728 4 TAGGGTC 2105 0.0 57.007122 5 >>END_MODULE