##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547263_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 890064 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.012190134642005 33.0 31.0 34.0 31.0 34.0 2 32.4462566736774 34.0 31.0 34.0 31.0 34.0 3 32.54464398065757 34.0 31.0 34.0 31.0 34.0 4 36.097818808535116 37.0 35.0 37.0 35.0 37.0 5 36.0696399360046 37.0 35.0 37.0 35.0 37.0 6 36.121782253860395 37.0 36.0 37.0 35.0 37.0 7 36.325992288195 37.0 36.0 37.0 35.0 37.0 8 36.32016461737583 37.0 37.0 37.0 35.0 37.0 9 38.11190880655773 39.0 39.0 39.0 37.0 39.0 10-11 37.6796803375937 39.0 37.5 39.0 35.0 39.0 12-13 36.92383019648025 39.0 35.0 39.0 33.5 39.0 14-15 38.06345217871973 40.0 36.0 41.0 33.0 41.0 16-17 38.22390243847633 40.0 36.0 41.0 34.0 41.0 18-19 38.05685883262328 40.0 36.0 41.0 34.0 41.0 20-21 37.82912071491488 40.0 35.0 41.0 34.0 41.0 22-23 37.63916583526578 39.5 35.0 41.0 33.0 41.0 24-25 37.59775589171116 39.5 35.0 41.0 33.5 41.0 26-27 37.55318493950997 40.0 35.0 41.0 33.5 41.0 28-29 37.45680198277877 39.5 35.0 41.0 33.0 41.0 30-31 37.29182114993978 39.0 35.0 41.0 33.0 41.0 32-33 36.90883127505438 39.0 35.0 41.0 32.5 41.0 34-35 36.514854549785184 39.0 35.0 41.0 31.0 41.0 36-37 36.27437633698251 39.0 35.0 41.0 30.0 41.0 38-39 36.1512582241277 39.0 35.0 41.0 30.0 41.0 40-41 36.01420684355283 39.0 35.0 41.0 30.0 41.0 42-43 35.947053245609304 39.0 35.0 41.0 29.5 41.0 44-45 35.8001317882759 38.0 35.0 41.0 29.0 41.0 46-47 35.67271791691384 38.0 35.0 41.0 29.0 41.0 48-49 35.55483819141095 38.0 35.0 40.0 28.0 41.0 50-51 35.32451205755991 37.5 35.0 40.0 27.5 41.0 52-53 35.124955621168816 37.0 35.0 40.0 27.0 41.0 54-55 34.91772614104154 36.5 34.0 40.0 27.0 41.0 56-57 34.6309624925848 36.0 34.0 40.0 26.0 41.0 58-59 34.377916082439015 36.0 34.0 39.5 26.0 41.0 60-61 34.031397180427476 35.0 34.0 39.0 25.5 41.0 62-63 33.651525058872174 35.0 33.5 39.0 24.5 40.0 64-65 33.332617092703444 35.0 33.0 38.0 23.5 40.0 66-67 33.04050776123964 35.0 33.0 37.5 22.5 40.0 68-69 32.61761457603049 35.0 33.0 37.0 21.0 39.5 70-71 32.33519275018426 35.0 33.0 36.5 20.0 39.0 72-73 32.08989578277517 35.0 32.5 36.0 20.0 39.0 74-75 31.803469750489853 35.0 32.0 35.5 19.5 37.5 76-77 29.89955160527782 33.0 29.5 34.5 16.5 36.0 78-79 30.94865425407611 34.0 31.0 35.0 18.0 36.0 80-81 31.13013052993942 34.5 32.0 35.0 18.0 36.0 82-83 30.97740331032375 34.5 31.5 35.0 17.5 36.0 84-85 30.785778326052956 34.0 31.0 35.0 16.0 36.0 86 30.346270605259846 34.0 31.0 35.0 15.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 2.0 11 4.0 12 15.0 13 43.0 14 142.0 15 435.0 16 1111.0 17 2559.0 18 5758.0 19 8847.0 20 9984.0 21 9663.0 22 8337.0 23 7202.0 24 6913.0 25 7338.0 26 8242.0 27 9839.0 28 11768.0 29 14516.0 30 18381.0 31 22892.0 32 27647.0 33 37131.0 34 98140.0 35 90116.0 36 78094.0 37 134692.0 38 190179.0 39 79904.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.214272232109153 24.01860989771522 29.154869762174407 15.612248108001223 2 32.47923744809362 24.492620755361415 30.292540761113806 12.73560103543116 3 28.432562152833952 23.954569559042945 33.7964460982581 13.816422189865 4 25.990715274407233 27.103893652591278 32.91628467166406 13.98910640133743 5 23.976253393014435 31.517059447410524 31.241236585234322 13.26545057434072 6 22.5620854230707 39.88937874130399 27.360953819051215 10.187582016574089 7 87.29023980298047 3.2258354455409948 7.913138830466123 1.5707859210124213 8 87.75155494436355 2.7887882219705546 7.86943410810908 1.5902227255568138 9 83.15570565712129 5.613528914774668 8.853857700120441 2.3769077279836055 10-11 40.11132907296554 27.16074349709684 20.906361789713998 11.821565640223625 12-13 29.771735515648313 24.81956353700408 28.664230886767694 16.744470060579914 14-15 18.004716514767477 30.430620719408942 35.27083445684805 16.293828308975534 16-17 22.30682288015244 25.263969781948266 32.81775243128584 19.611454906613456 18-19 24.977754408671736 26.664936454007805 30.322650955436913 18.03465818188355 20-21 26.66184678854554 27.050470527962034 29.51641679699437 16.77126588649805 22-23 22.370807043089037 24.1057946394866 31.97230760934045 21.551090708083915 24-25 20.719015711229755 26.798410001977384 33.39596927861368 19.086605008179188 26-27 19.330576228226285 32.39677146811915 29.900209423142606 18.37244288051196 28-29 18.194421974150174 27.77755307483507 34.86429065775045 19.163734293264305 30-31 22.31401337431915 27.775811627029068 30.835703949378924 19.074471049272862 32-33 25.102576893346995 27.951304625285374 28.530195581441337 18.415922899926297 34-35 20.51599660249151 28.352567905229286 30.210524187024753 20.920911305254453 36-37 23.379217674234663 28.84736378507613 29.27154676517644 18.50187177551277 38-39 21.062137104747524 30.336807240827625 28.11365250139316 20.487403153031693 40-41 21.496150838591383 27.65160707544626 27.99360495425048 22.858637131711877 42-43 22.423162828740406 26.981037318664725 27.956978374588793 22.638821478006076 44-45 20.25534118894821 30.548702115802907 28.020625483111328 21.175331212137554 46-47 21.38323760987974 29.50186728145392 28.258979129590685 20.85591597907566 48-49 22.016506678171456 26.676227776878964 30.138843948300348 21.168421596649228 50-51 20.03063824623847 30.394106491218608 28.193197343112402 21.382057919430515 52-53 22.438217925901956 27.09018677308598 29.236549281849395 21.235046019162667 54-55 22.074648564597602 27.48914684786712 30.29557425084039 20.14063033669489 56-57 22.09459095076309 26.295805694871383 29.05465224972586 22.554951104639667 58-59 23.343714609286522 27.847491865753476 27.85299708784986 20.95579643711014 60-61 24.243200488953605 29.326374283197616 26.461467939384136 19.96895728846465 62-63 22.910712038684856 27.170967480990132 29.06892088658793 20.84939959373708 64-65 20.382860108935986 30.090869870031817 29.219808912617516 20.306461108414673 66-67 19.777903611425696 29.032406658397598 26.419392313361733 24.77029741681497 68-69 19.997831616602852 30.95766147153463 26.01161264807924 23.03289426378328 70-71 20.464989034496394 29.61573549767208 27.944226482590018 21.97504898524151 72-73 22.502651494723974 30.064860504413165 26.50303798378544 20.929450017077425 74-75 21.49244324003667 31.231405831490772 25.207288464649736 22.06886246382283 76-77 24.35010291394776 28.639738266012333 26.188622391198834 20.82153642884107 78-79 20.142877366121986 29.998011378957017 28.356331679519677 21.50277957540132 80-81 18.24138488917651 29.254300814323464 29.572704884143164 22.931609412356867 82-83 19.666450951841664 28.209207427780473 30.046603390318 22.07773823005986 84-85 18.37738634525158 27.946585863488465 28.722541300400874 24.953486490859085 86 19.71386327275342 27.746768771683833 29.723480558701397 22.81588739686135 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 360.0 2 2268.0 3 2662.0 4 1355.5 5 1708.5 6 2160.0 7 2354.0 8 2477.5 9 2555.0 10 2452.0 11 2402.5 12 2450.5 13 2526.5 14 2562.0 15 2617.0 16 2718.0 17 2765.0 18 2790.5 19 2922.0 20 3192.5 21 3356.0 22 3447.5 23 3803.5 24 4549.0 25 5287.5 26 5750.5 27 6577.5 28 8533.5 29 9868.0 30 10791.5 31 12648.0 32 14535.0 33 15539.0 34 17408.5 35 20407.5 36 21587.0 37 23033.5 38 24613.0 39 26819.5 40 30193.0 41 34539.0 42 39624.0 43 41663.0 44 43022.0 45 44727.0 46 46046.5 47 47651.5 48 46983.0 49 42604.0 50 39525.0 51 37394.0 52 32838.5 53 29352.5 54 27511.5 55 25394.0 56 23602.0 57 23148.0 58 20805.5 59 16705.0 60 12980.5 61 9798.5 62 7483.5 63 5799.0 64 5214.0 65 4547.5 66 3389.0 67 2590.0 68 2009.5 69 1700.0 70 1492.5 71 1321.0 72 1019.0 73 637.0 74 492.0 75 322.5 76 192.5 77 148.5 78 90.0 79 50.0 80 43.5 81 27.0 82 15.0 83 13.0 84 9.0 85 4.0 86 3.0 87 4.0 88 5.5 89 4.0 90 1.0 91 0.0 92 1.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 890064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.439747176177292 #Duplication Level Percentage of deduplicated Percentage of total 1 78.07213760110152 18.299911668735444 2 6.243642492471553 2.9269880296394124 3 2.3785845041157363 1.6726025824093766 4 1.3605272708010216 1.2756166101548179 5 0.9460401401539899 1.1087470851862429 6 0.7222994416132107 1.0158309778144616 7 0.5584943779450952 0.9163676912844605 8 0.5015103042921663 0.9404219791084896 9 0.43608697231755505 0.9199591540153305 >10 6.970655722012256 40.47045938949024 >50 1.7167161287256099 26.800953559983675 >100 0.09282159862416293 2.7424205196556084 >500 0.0 0.0 >1k 0.0 0.0 >5k 4.8344582616751525E-4 0.9097207525224256 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8028 0.9019576120368873 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1235147135486887E-4 0.0 0.0 0.03437955023458987 0.0 2 1.1235147135486887E-4 0.0 0.0 0.08740944471408797 0.0 3 1.1235147135486887E-4 0.0 0.0 0.14223696273526398 0.0 4 1.1235147135486887E-4 0.0 0.0 0.22728702655089972 0.0 5 1.1235147135486887E-4 0.0 0.0 0.42300328965108125 0.0 6 1.1235147135486887E-4 0.0 0.0 0.6351228675690737 0.0 7 1.1235147135486887E-4 0.0 0.0 0.781404483273113 0.0 8 1.1235147135486887E-4 0.0 0.0 1.0390264070898272 0.0 9 1.1235147135486887E-4 0.0 0.0 1.1428391666217261 0.0 10 1.1235147135486887E-4 0.0 0.0 1.3135010516097718 0.0 11 1.1235147135486887E-4 0.0 0.0 1.5653930503873879 0.0 12 1.1235147135486887E-4 0.0 0.0 1.7636933973287314 0.0 13 1.1235147135486887E-4 0.0 0.0 1.8468334861313345 0.0 14 1.1235147135486887E-4 0.0 0.0 1.8830106599076022 0.0 15 1.1235147135486887E-4 0.0 0.0 1.931209441118841 0.0 16 1.1235147135486887E-4 0.0 0.0 2.030528141796545 0.0 17 1.1235147135486887E-4 0.0 0.0 2.1560247352999333 0.0 18 1.1235147135486887E-4 0.0 0.0 2.3076992216290066 0.0 19 1.1235147135486887E-4 0.0 0.0 2.4110625752754857 0.0 20 1.1235147135486887E-4 0.0 0.0 2.5116171421380935 0.0 21 1.1235147135486887E-4 0.0 0.0 2.6449783386363226 0.0 22 1.1235147135486887E-4 0.0 0.0 2.785305326358554 0.0 23 1.1235147135486887E-4 0.0 0.0 2.9423726833126604 0.0 24 1.1235147135486887E-4 0.0 0.0 3.0677569253446944 0.0 25 1.1235147135486887E-4 0.0 0.0 3.1760637437307877 0.0 26 1.1235147135486887E-4 0.0 0.0 3.27718006795017 0.0 27 1.1235147135486887E-4 0.0 0.0 3.3912168113753616 0.0 28 1.1235147135486887E-4 0.0 0.0 3.5112081827823616 0.0 29 1.1235147135486887E-4 0.0 0.0 3.647827571949882 0.0 30 1.1235147135486887E-4 0.0 0.0 3.790401589099211 0.0 31 1.1235147135486887E-4 0.0 0.0 3.9370202592173147 0.0 32 1.1235147135486887E-4 0.0 0.0 4.058022793866509 0.0 33 1.1235147135486887E-4 0.0 0.0 4.1856540653256396 0.0 34 1.1235147135486887E-4 0.0 0.0 4.3249698898056765 0.0 35 1.1235147135486887E-4 0.0 0.0 4.484846033543655 0.0 36 1.1235147135486887E-4 0.0 0.0 4.63494759927376 0.0 37 1.1235147135486887E-4 0.0 0.0 4.792352010641931 0.0 38 1.1235147135486887E-4 0.0 0.0 4.967058548598753 0.0 39 1.1235147135486887E-4 0.0 0.0 5.220523467975337 0.0 40 1.1235147135486887E-4 0.0 0.0 5.41466681047655 0.0 41 1.1235147135486887E-4 0.0 0.0 5.6069001779647305 0.0 42 1.1235147135486887E-4 0.0 0.0 5.790707185101296 0.0 43 1.1235147135486887E-4 0.0 0.0 5.954290927393985 0.0 44 1.1235147135486887E-4 0.0 0.0 6.131019791835194 0.0 45 1.1235147135486887E-4 0.0 0.0 6.299996404752917 0.0 46 1.1235147135486887E-4 0.0 0.0 6.489870391342645 0.0 47 1.1235147135486887E-4 0.0 0.0 6.684013733843859 0.0 48 1.1235147135486887E-4 0.0 0.0 6.862540221826745 0.0 49 1.1235147135486887E-4 0.0 0.0 7.041853170109116 0.0 50 1.1235147135486887E-4 0.0 0.0 7.232401265526973 0.0 51 1.1235147135486887E-4 0.0 0.0 7.431937478653221 0.0 52 1.1235147135486887E-4 0.0 0.0 7.665179133185928 0.0 53 1.1235147135486887E-4 0.0 0.0 7.861794208056948 0.0 54 1.1235147135486887E-4 0.0 0.0 8.065487425623326 0.0 55 1.1235147135486887E-4 0.0 0.0 8.273112944687124 0.0 56 1.1235147135486887E-4 0.0 0.0 8.474334429883694 0.0 57 1.1235147135486887E-4 0.0 0.0 8.674881806252134 0.0 58 1.1235147135486887E-4 0.0 0.0 8.87026101493825 0.0 59 1.1235147135486887E-4 0.0 0.0 9.079459454601018 0.0 60 1.1235147135486887E-4 0.0 0.0 9.293039601646623 0.0 61 1.1235147135486887E-4 0.0 0.0 9.510439698718294 0.0 62 1.1235147135486887E-4 0.0 0.0 9.75794999011307 0.0 63 1.1235147135486887E-4 0.0 0.0 10.009055528591203 0.0 64 1.1235147135486887E-4 0.0 0.0 10.246791241978105 0.0 65 1.1235147135486887E-4 0.0 0.0 10.475988243542037 0.0 66 1.1235147135486887E-4 0.0 0.0 10.69754534505384 0.0 67 1.1235147135486887E-4 0.0 0.0 10.920338312750543 0.0 68 1.1235147135486887E-4 0.0 0.0 11.172342662999515 0.0 69 1.1235147135486887E-4 0.0 0.0 11.497712524043214 0.0 70 1.1235147135486887E-4 0.0 0.0 11.743649894839022 0.0 71 1.1235147135486887E-4 0.0 0.0 11.971723381689406 0.0 72 1.1235147135486887E-4 0.0 0.0 12.196988081755919 0.0 73 1.1235147135486887E-4 0.0 0.0 12.440116665767855 0.0 74 1.1235147135486887E-4 0.0 0.0 12.682121735066243 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGTC 15 0.0013096933 80.0 80 CGTTTTT 4410 0.0 74.195015 1 TAAACGG 110 0.0 69.09091 2 CGTAAGG 145 0.0 68.965515 2 TAGGGAT 1455 0.0 67.07904 5 TACGGGA 380 0.0 66.31579 4 ATAGGGA 1380 0.0 64.347824 4 GCGGGAT 570 0.0 63.85965 5 GGGCGAT 585 0.0 62.90598 7 CGAGGGA 670 0.0 62.68657 4 GTAGGGA 1375 0.0 62.254547 4 AGGGATT 1465 0.0 62.25256 6 CTACGGG 130 0.0 61.538464 3 AGGGACC 910 0.0 61.538464 6 TAGGGAC 1155 0.0 60.95238 5 TTAGGGA 1425 0.0 60.91228 4 GCGCGAC 20 0.00409816 60.0 9 TAGCGAG 80 0.0 60.0 1 ACGGGAC 280 0.0 60.0 5 CGCTTAA 20 0.00409816 60.0 80 >>END_MODULE