Basic Statistics
Measure | Value |
---|---|
Filename | SRR1547262_1.fastq.gz |
File type | Conventional base calls |
Encoding | Illumina 1.5 |
Total Sequences | 2523068 |
Sequences flagged as poor quality | 0 |
Sequence length | 86 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 37665 | 1.492825401455688 | No Hit |
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGC | 3857 | 0.15286944307485964 | No Hit |
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA | 2552 | 0.10114669917735074 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTTTTT | 14760 | 0.0 | 75.69106 | 1 |
GGACGTA | 60 | 0.0 | 73.33333 | 8 |
AGGGCGA | 935 | 0.0 | 71.87166 | 6 |
GGTTACG | 80 | 0.0 | 70.0 | 1 |
CGAACGG | 150 | 0.0 | 69.333336 | 2 |
CGAGGGA | 1565 | 0.0 | 67.98722 | 4 |
ACGGGAT | 1410 | 0.0 | 67.51773 | 5 |
GCGAACG | 125 | 0.0 | 67.2 | 1 |
CGGGATT | 1530 | 0.0 | 67.189545 | 6 |
GCGGGAT | 1745 | 0.0 | 67.16332 | 5 |
TACGGGA | 995 | 0.0 | 67.13568 | 4 |
ACGAGGG | 1480 | 0.0 | 66.75676 | 3 |
CTTCGCG | 30 | 3.7968985E-6 | 66.666664 | 1 |
TACGCGG | 120 | 0.0 | 66.666664 | 2 |
TTACGGG | 740 | 0.0 | 66.48649 | 3 |
GTCGACG | 55 | 9.094947E-12 | 65.454544 | 2 |
ACGGGAC | 900 | 0.0 | 65.333336 | 5 |
GCGATAT | 160 | 0.0 | 65.0 | 9 |
TAGTGCG | 155 | 0.0 | 64.51613 | 1 |
TAGGGAT | 4840 | 0.0 | 64.13223 | 5 |