##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547262_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2523068 Sequences flagged as poor quality 0 Sequence length 86 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10729278798669 33.0 31.0 34.0 31.0 34.0 2 32.520961781450204 34.0 31.0 34.0 31.0 34.0 3 32.584096029120104 34.0 31.0 34.0 31.0 34.0 4 36.123786199975584 37.0 35.0 37.0 35.0 37.0 5 36.09346795250861 37.0 35.0 37.0 35.0 37.0 6 36.158691323420534 37.0 36.0 37.0 35.0 37.0 7 36.4128374661325 37.0 37.0 37.0 35.0 37.0 8 36.42178292459815 37.0 37.0 37.0 35.0 37.0 9 38.23698608202395 39.0 39.0 39.0 37.0 39.0 10-11 37.75019856777542 39.0 37.5 39.0 35.0 39.0 12-13 37.03983325062978 39.0 35.0 39.0 33.5 39.0 14-15 38.20920541975087 40.0 36.0 41.0 33.5 41.0 16-17 38.38818731797954 40.0 36.0 41.0 34.0 41.0 18-19 38.2197485363058 40.0 36.0 41.0 34.0 41.0 20-21 37.9938285452473 40.0 35.0 41.0 34.0 41.0 22-23 37.799127688988165 40.0 35.0 41.0 34.0 41.0 24-25 37.75570119394325 40.0 35.0 41.0 34.0 41.0 26-27 37.7205142707212 40.0 35.0 41.0 34.0 41.0 28-29 37.63632470468493 40.0 35.0 41.0 34.0 41.0 30-31 37.431930887316554 39.5 35.0 41.0 33.5 41.0 32-33 37.031415919031915 39.0 35.0 41.0 33.0 41.0 34-35 36.65558756244382 39.0 35.0 41.0 32.0 41.0 36-37 36.42892581571326 39.0 35.0 41.0 31.0 41.0 38-39 36.33259527686135 39.0 35.0 41.0 31.0 41.0 40-41 36.184561811255186 39.0 35.0 41.0 30.5 41.0 42-43 36.153104276222436 39.0 35.0 41.0 31.0 41.0 44-45 36.027269974491375 38.5 35.0 41.0 30.0 41.0 46-47 35.88363789640232 38.0 35.0 41.0 30.0 41.0 48-49 35.79950738545295 38.0 35.0 40.0 30.0 41.0 50-51 35.57036056895811 38.0 35.0 40.0 29.0 41.0 52-53 35.38717050035909 37.5 35.0 40.0 28.5 41.0 54-55 35.23053203480842 37.0 35.0 40.0 28.0 41.0 56-57 34.96332976360526 36.5 34.5 40.0 27.5 41.0 58-59 34.71072400743856 36.0 34.0 40.0 26.5 41.0 60-61 34.34031722490238 36.0 34.0 39.5 26.0 41.0 62-63 33.90620268657048 35.0 33.5 39.0 25.0 40.5 64-65 33.4483248172463 35.0 33.0 38.5 22.5 40.0 66-67 33.047608903129046 35.0 33.0 38.0 21.0 40.0 68-69 32.4770204370235 35.0 33.0 37.0 18.5 39.5 70-71 32.03169514258038 35.0 33.0 36.5 16.5 39.0 72-73 31.675655987076052 35.0 32.0 36.0 13.0 39.0 74-75 31.328370856433516 35.0 32.0 36.0 11.5 38.0 76-77 29.407205037676352 33.0 29.0 34.5 10.0 36.0 78-79 30.293542227161538 34.0 30.5 35.0 10.0 36.5 80-81 30.3574602428472 35.0 31.0 35.0 10.0 36.0 82-83 30.09491737836634 34.5 31.0 35.0 10.0 36.0 84-85 29.81998166517906 34.0 30.5 35.0 10.0 36.0 86 29.424913240546825 34.0 29.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 16.0 12 20.0 13 70.0 14 246.0 15 835.0 16 2669.0 17 6692.0 18 16514.0 19 25723.0 20 27225.0 21 24183.0 22 20132.0 23 16558.0 24 16692.0 25 18469.0 26 22461.0 27 27687.0 28 35200.0 29 45217.0 30 59347.0 31 74870.0 32 92311.0 33 114927.0 34 272458.0 35 274459.0 36 214312.0 37 344963.0 38 516337.0 39 251937.0 40 528.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.457351129656434 23.283835394052 31.457812472751428 15.801001003540135 2 31.261820925952055 24.886051426279433 31.32079674428117 12.531330903487342 3 27.3861029508519 24.90681979241146 35.68663230638255 12.020444950354092 4 25.32345541222036 26.21498905301007 34.723836218445165 13.737719316324412 5 23.211582089741537 31.155402866668673 32.51026131677783 13.122753726811961 6 21.463749688870852 39.9324552489271 28.056437638620917 10.547357423581131 7 87.1951925195833 2.786567781764106 8.586134024132525 1.4321056745200684 8 87.86572537878487 2.0921750820826075 8.35260880800676 1.6894907311257565 9 84.18627639048968 4.516604387991128 9.35091721665845 1.946202004860749 10-11 39.45224623355375 27.386142585138412 22.158776537136536 11.002834644171303 12-13 27.284678811668968 26.124523794047565 30.451161046789068 16.1396363474944 14-15 14.711712090201296 32.38737521144892 36.76284190517259 16.138070793177196 16-17 19.714391367969473 27.041661183923697 34.467560921861796 18.77638652624503 18-19 21.39296285316131 28.660919959351077 32.163877469810565 17.78223971767705 20-21 23.891944251997966 29.84005980021149 30.754442607175076 15.513553340615474 22-23 19.52501874701752 26.586481220482366 32.7503658244645 21.138134208035613 24-25 17.56016881035311 29.184924861319633 35.60542165332048 17.649484675006775 26-27 16.659955260817387 35.175231107524645 30.836901740262253 17.327911891395715 28-29 15.388388263812153 30.05816727888428 36.25853524360026 18.294909213703317 30-31 20.5436199103631 30.519767996740477 31.584761092447767 17.351851000448658 32-33 23.506223375668036 30.58591762092817 29.082549499260423 16.82530950414337 34-35 18.420648987661053 31.15304462662124 30.608489347096473 19.817817038621236 36-37 21.098678275813416 31.39037473425211 30.333863375858282 17.177083614076196 38-39 18.873589613914486 33.34089687634261 28.455455818075453 19.330057691667445 40-41 19.966762687331453 29.563095406069117 28.982294571529582 21.487847335069844 42-43 19.442123636778717 29.224499696401363 29.11465327133474 22.218723395485178 44-45 18.60056883128001 32.80494223699083 28.015634140657326 20.57885479107182 46-47 19.865992513875963 31.857762057938988 28.748135206819637 19.528110221365417 48-49 20.04004648309122 28.644511364735315 31.153460786629612 20.161981365543856 50-51 18.429091090688004 31.921216550643898 28.88697411246942 20.762718246198673 52-53 20.766701491993082 28.839531871515156 30.57468130070216 19.8190853357896 54-55 20.57643709959462 28.622454884291663 31.75473273015234 19.04637528596138 56-57 20.942638089817635 27.599018337991684 30.23481729386604 21.22352627832464 58-59 22.102297678857642 29.654274082188824 29.161263192272262 19.08216504668126 60-61 21.90254087483968 31.254429131517657 27.445019317751246 19.398010675891413 62-63 21.088412995606937 29.6154126642643 30.803410768160035 18.49276357196873 64-65 18.111739358590416 33.59881699581621 29.689588231470577 18.599855414122807 66-67 17.48797495747241 32.56099320351255 26.59561692352327 23.355414915491775 68-69 17.196722403042646 34.34960928520357 26.021038671966036 22.432629639787752 70-71 17.801224540916056 33.22585835974298 28.68646425700774 20.286452842333222 72-73 20.24029871569058 33.02094909847852 27.16351679780331 19.575235388027593 74-75 19.466974334421426 34.749301247528805 25.52360855910344 20.26011585894633 76-77 22.75820548633648 31.834675086046037 26.509987047515164 18.89713238010232 78-79 18.14897577076797 32.26106074033677 29.333196727159155 20.25676676173611 80-81 16.253901995507057 31.847040983437623 30.252078025641797 21.64697899541352 82-83 17.766187831639893 30.898671775790426 30.502903607829836 20.832236784739848 84-85 16.202000897320247 31.010975526620765 29.360068773413957 23.426954802645035 86 17.45268062533392 30.86615184370774 30.19843301884848 21.48273451210986 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1133.0 1 1794.0 2 13162.5 3 13896.0 4 4528.0 5 7078.5 6 11280.5 7 13538.0 8 15536.0 9 17693.0 10 16989.5 11 14831.0 12 12741.5 13 11428.5 14 10909.0 15 10767.5 16 10559.5 17 10358.0 18 10414.0 19 10698.5 20 10991.0 21 11190.0 22 11399.5 23 12624.0 24 14024.0 25 15500.0 26 18355.0 27 21385.0 28 26636.0 29 30621.0 30 32132.0 31 36051.0 32 42574.5 33 50014.0 34 56226.5 35 63250.0 36 67385.0 37 73294.0 38 88916.0 39 100266.5 40 109743.5 41 123810.0 42 135146.5 43 140256.0 44 140460.0 45 136655.5 46 135596.5 47 140535.5 48 135108.0 49 114126.0 50 100561.0 51 88149.0 52 69606.0 53 59217.0 54 51978.5 55 48003.0 56 43652.0 57 40296.0 58 36465.5 59 27357.5 60 18121.5 61 12753.5 62 9946.5 63 6835.0 64 5121.0 65 4281.5 66 2754.5 67 1479.5 68 787.5 69 628.5 70 520.0 71 466.0 72 432.0 73 297.5 74 181.5 75 156.5 76 123.5 77 81.5 78 36.5 79 10.0 80 31.0 81 29.0 82 6.5 83 6.0 84 2.5 85 0.0 86 0.0 87 0.0 88 0.5 89 1.0 90 1.5 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2523068.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.851290080533467 #Duplication Level Percentage of deduplicated Percentage of total 1 75.81719159415492 15.050690634269529 2 9.640876199961953 3.827676601519118 3 3.626129254809792 2.159500311202135 4 1.8826776538696794 1.4949432094042074 5 1.185197761673828 1.1763852284893064 6 0.8661027243009193 1.0315953851782709 7 0.6555653286798714 0.9109672254455075 8 0.5425153312395942 0.8615703370859108 9 0.41509872358676664 0.7416220656582077 >10 3.1171242486189943 13.303641612186407 >50 0.9576004030775388 13.899874748984736 >100 1.2876611731782122 42.68120033951225 >500 0.003432685432753114 0.4737958995288816 >1k 0.002624994742693558 0.8767629196611868 >5k 0.0 0.0 >10k+ 2.0192267251488904E-4 1.509773481874393 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37665 1.492825401455688 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGC 3857 0.15286944307485964 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2552 0.10114669917735074 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9634286511501075E-5 0.0 0.0 0.09908571627875269 0.0 2 3.9634286511501075E-5 0.0 0.0 0.275180851249352 0.0 3 3.9634286511501075E-5 0.0 0.0 0.4084709567875301 0.0 4 3.9634286511501075E-5 0.0 0.0 0.6400144585877194 0.0 5 3.9634286511501075E-5 0.0 0.0 1.2286628818565335 0.0 6 3.9634286511501075E-5 0.0 0.0 1.7009054056410686 0.0 7 3.9634286511501075E-5 0.0 0.0 2.0660560872715283 0.0 8 3.9634286511501075E-5 0.0 0.0 2.7569213354535034 0.0 9 3.9634286511501075E-5 0.0 0.0 3.032696701000528 0.0 10 3.9634286511501075E-5 0.0 0.0 3.474698264176788 0.0 11 3.9634286511501075E-5 0.0 0.0 4.301390212233677 0.0 12 3.9634286511501075E-5 0.0 0.0 4.870498932252321 0.0 13 3.9634286511501075E-5 0.0 0.0 5.0691063419614535 0.0 14 3.9634286511501075E-5 0.0 0.0 5.145481612069116 0.0 15 3.9634286511501075E-5 0.0 0.0 5.255228951419462 0.0 16 3.9634286511501075E-5 0.0 0.0 5.4924401561907965 0.0 17 3.9634286511501075E-5 0.0 0.0 5.827389511499492 0.0 18 3.9634286511501075E-5 0.0 0.0 6.198762776112257 0.0 19 3.9634286511501075E-5 0.0 0.0 6.471525935884407 0.0 20 3.9634286511501075E-5 0.0 0.0 6.734103084023102 0.0 21 3.9634286511501075E-5 0.0 0.0 7.040832827335609 0.0 22 3.9634286511501075E-5 0.0 0.0 7.385096239974507 0.0 23 3.9634286511501075E-5 0.0 0.0 7.741408475712902 0.0 24 3.9634286511501075E-5 0.0 0.0 7.997763040869291 0.0 25 3.9634286511501075E-5 0.0 0.0 8.21238270232907 0.0 26 3.9634286511501075E-5 0.0 0.0 8.411584626335873 0.0 27 3.9634286511501075E-5 0.0 0.0 8.626521362087743 0.0 28 3.9634286511501075E-5 0.0 0.0 8.851445938040513 0.0 29 3.9634286511501075E-5 0.0 0.0 9.116321874796874 0.0 30 3.9634286511501075E-5 0.0 0.0 9.43093884112517 0.0 31 3.9634286511501075E-5 0.0 0.0 9.71083617246939 0.0 32 3.9634286511501075E-5 0.0 0.0 9.94638273720724 0.0 33 3.9634286511501075E-5 0.0 0.0 10.182880524821368 0.0 34 3.9634286511501075E-5 0.0 0.0 10.446210724403782 0.0 35 3.9634286511501075E-5 0.0 0.0 10.743071530374925 0.0 36 3.9634286511501075E-5 0.0 0.0 11.015240175849403 0.0 37 3.9634286511501075E-5 0.0 0.0 11.302073507333136 0.0 38 7.926857302300215E-5 0.0 0.0 11.590888553142443 0.0 39 7.926857302300215E-5 0.0 0.0 11.975182595157959 0.0 40 7.926857302300215E-5 0.0 0.0 12.29312884155322 0.0 41 7.926857302300215E-5 0.0 0.0 12.597163453382946 0.0 42 7.926857302300215E-5 0.0 0.0 12.9109480996945 0.0 43 7.926857302300215E-5 0.0 0.0 13.200476562661015 0.0 44 7.926857302300215E-5 0.0 0.0 13.48972758562195 0.0 45 7.926857302300215E-5 0.0 0.0 13.789600597367967 0.0 46 7.926857302300215E-5 0.0 0.0 14.11127246669531 0.0 47 7.926857302300215E-5 0.0 0.0 14.432270553151957 0.0 48 7.926857302300215E-5 0.0 0.0 14.742844822256078 0.0 49 7.926857302300215E-5 0.0 0.0 15.064595960156444 0.0 50 7.926857302300215E-5 0.0 0.0 15.391856263881909 0.0 51 7.926857302300215E-5 0.0 0.0 15.716897047562728 0.0 52 7.926857302300215E-5 0.0 0.0 16.080977603457377 0.0 53 7.926857302300215E-5 0.0 0.0 16.404155575672156 0.0 54 7.926857302300215E-5 0.0 0.0 16.74528787967665 0.0 55 7.926857302300215E-5 0.0 0.0 17.087093966551834 0.0 56 7.926857302300215E-5 0.0 0.0 17.421607344708903 0.0 57 7.926857302300215E-5 0.0 0.0 17.74981887131064 0.0 58 7.926857302300215E-5 0.0 0.0 18.06027423755523 0.0 59 7.926857302300215E-5 0.0 0.0 18.400494952969957 0.0 60 7.926857302300215E-5 0.0 0.0 18.759621223050665 0.0 61 7.926857302300215E-5 0.0 0.0 19.133967059151793 0.0 62 7.926857302300215E-5 0.0 0.0 19.54390448454025 0.0 63 7.926857302300215E-5 0.0 0.0 19.964820607292392 0.0 64 7.926857302300215E-5 0.0 0.0 20.344120729207457 0.0 65 7.926857302300215E-5 0.0 0.0 20.707844576523502 0.0 66 7.926857302300215E-5 0.0 0.0 21.04834273194381 0.0 67 7.926857302300215E-5 0.0 0.0 21.391337847414338 0.0 68 7.926857302300215E-5 0.0 0.0 21.768259912138713 0.0 69 7.926857302300215E-5 0.0 0.0 22.231188378593046 0.0 70 7.926857302300215E-5 0.0 0.0 22.58857074006725 0.0 71 1.1890285953450323E-4 0.0 0.0 22.947498838715404 0.0 72 1.585371460460043E-4 0.0 0.0 23.305990960211933 0.0 73 1.585371460460043E-4 0.0 0.0 23.67764166483028 0.0 74 1.585371460460043E-4 0.0 0.0 24.074896118535055 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14760 0.0 75.69106 1 GGACGTA 60 0.0 73.33333 8 AGGGCGA 935 0.0 71.87166 6 GGTTACG 80 0.0 70.0 1 CGAACGG 150 0.0 69.333336 2 CGAGGGA 1565 0.0 67.98722 4 ACGGGAT 1410 0.0 67.51773 5 GCGAACG 125 0.0 67.2 1 CGGGATT 1530 0.0 67.189545 6 GCGGGAT 1745 0.0 67.16332 5 TACGGGA 995 0.0 67.13568 4 ACGAGGG 1480 0.0 66.75676 3 CTTCGCG 30 3.7968985E-6 66.666664 1 TACGCGG 120 0.0 66.666664 2 TTACGGG 740 0.0 66.48649 3 GTCGACG 55 9.094947E-12 65.454544 2 ACGGGAC 900 0.0 65.333336 5 GCGATAT 160 0.0 65.0 9 TAGTGCG 155 0.0 64.51613 1 TAGGGAT 4840 0.0 64.13223 5 >>END_MODULE