##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547261_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1486047 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98617674945678 33.0 31.0 34.0 30.0 34.0 2 32.393974753153834 33.0 31.0 34.0 31.0 34.0 3 32.48038319111038 34.0 31.0 34.0 31.0 34.0 4 36.036281490423924 37.0 35.0 37.0 35.0 37.0 5 36.008581828165596 37.0 35.0 37.0 35.0 37.0 6 36.057810419185934 37.0 35.0 37.0 35.0 37.0 7 36.30937850552506 37.0 36.0 37.0 35.0 37.0 8 36.30338542455252 37.0 37.0 37.0 35.0 37.0 9 38.071232605698206 39.0 39.0 39.0 37.0 39.0 10-11 37.60728193657401 39.0 37.5 39.0 35.0 39.0 12-13 36.59072559616217 39.0 35.0 39.0 33.0 39.0 14-15 37.64406442057351 40.0 35.0 41.0 33.0 41.0 16-17 37.866502876423155 40.0 35.0 41.0 34.0 41.0 18-19 37.73365041617123 39.0 36.0 41.0 34.0 41.0 20-21 37.48026071853717 39.0 35.0 41.0 34.0 41.0 22-23 37.25573181736513 39.0 35.0 41.0 33.0 41.0 24-25 37.189966064330406 38.5 35.0 41.0 33.0 41.0 26-27 37.089205455816675 38.0 35.0 41.0 33.0 41.0 28-29 37.013205167804244 38.0 35.0 41.0 33.0 41.0 30-31 36.845503204138225 38.0 35.0 41.0 33.0 41.0 32-33 36.45047330266136 38.0 35.0 41.0 31.5 41.0 34-35 36.064000331079704 38.0 35.0 41.0 31.0 41.0 36-37 35.81351733828069 38.0 35.0 41.0 30.0 41.0 38-39 35.75897734055518 37.5 35.0 40.0 30.0 41.0 40-41 35.59796964698963 37.0 35.0 40.0 29.5 41.0 42-43 35.59447278585401 37.0 35.0 40.0 30.0 41.0 44-45 35.48104265881227 37.0 35.0 40.0 29.5 41.0 46-47 35.31767837760178 37.0 35.0 40.0 29.0 41.0 48-49 35.236883490226084 36.0 35.0 40.0 29.0 41.0 50-51 35.00508698580866 36.0 35.0 40.0 27.5 41.0 52-53 34.805485627305195 36.0 34.0 40.0 27.0 41.0 54-55 34.63646741994029 35.5 34.0 40.0 27.0 41.0 56-57 34.36102592986629 35.0 34.0 39.5 26.0 41.0 58-59 34.05690566987451 35.0 34.0 39.0 25.5 41.0 60-61 33.604307602653215 35.0 33.5 38.5 24.5 40.0 62-63 33.030048511251664 35.0 32.5 38.0 22.5 40.0 64-65 32.51926284969453 35.0 32.5 37.0 20.0 40.0 66-67 32.08351788335093 35.0 32.0 36.5 18.5 39.5 68-69 31.61512152711186 35.0 32.0 36.0 14.0 39.0 70-71 31.21590097755993 35.0 31.0 35.5 11.5 38.5 72-73 30.900203694768738 35.0 31.0 35.0 10.5 38.0 74-75 30.607405754999675 35.0 31.0 35.0 10.0 37.0 76-77 28.759162395267445 32.5 27.5 34.5 10.0 35.5 78-79 29.60595257081371 34.0 29.0 35.0 10.0 36.0 80-81 29.863586077694716 34.0 30.0 35.0 10.0 36.0 82-83 29.671726398963155 34.0 29.5 35.0 10.0 36.0 84-85 29.45642297989229 34.0 29.0 35.0 8.0 35.0 86 29.068083983884762 34.0 29.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 2.0 10 1.0 11 5.0 12 20.0 13 60.0 14 205.0 15 669.0 16 1856.0 17 4242.0 18 8968.0 19 13741.0 20 15230.0 21 14912.0 22 13113.0 23 12266.0 24 12984.0 25 14821.0 26 17905.0 27 21829.0 28 26946.0 29 34437.0 30 43674.0 31 52902.0 32 60138.0 33 71593.0 34 202028.0 35 194023.0 36 111987.0 37 183604.0 38 247287.0 39 104364.0 40 229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.778093828795452 25.093957324364574 29.783983952055355 16.34396489478462 2 29.956925992246543 26.452729960761673 30.78987407531525 12.800469971676534 3 27.94319425967012 24.49545673858229 35.040345291905304 12.521003709842285 4 25.555988471427888 26.842017782748464 34.05296063987209 13.54903310595156 5 23.912231578139856 31.645096016478618 30.827557943995043 13.615114461386485 6 23.032380537089338 37.874374094493646 28.021792042916545 11.071453325500471 7 85.09771225270802 4.026857831549069 8.86950412739301 2.0059257883498978 8 85.2926589805033 3.494505893824354 8.661771801295652 2.551063324376685 9 80.72671994896527 6.067170150069278 10.243888652243166 2.9622212487222814 10-11 45.61141067543624 24.09193652690662 19.17654690598615 11.12010589167099 12-13 29.768304770979654 30.242314004873332 25.27739701368799 14.711984210459022 14-15 14.130609597139257 36.05929018395784 35.9055938338424 13.9045063850605 16-17 16.155410966140373 26.176594683748228 35.40685456112761 22.261139788983794 18-19 22.00236600861211 29.208833906330018 30.208162998882273 18.580637086175606 20-21 24.54626266867737 30.13292984676797 27.96358392433079 17.35722356022387 22-23 19.370988939111616 29.20324861865069 27.96529988620817 23.460462556029523 24-25 17.372263461384467 28.74246238510626 35.33007367869253 18.555200474816747 26-27 16.56825120605203 37.850014165097065 27.526383755022554 18.055350873828353 28-29 14.653910677118557 29.93270064809525 36.321125778659756 19.092262896126435 30-31 21.604733901417653 32.63530695866281 27.723584785676366 18.036374354243172 32-33 26.160814563738562 31.315429458153073 25.297921263593953 17.225834714514413 34-35 19.590598413105372 30.60323798641631 28.106446162200793 21.699717438277524 36-37 23.250913329120813 31.267079708784447 28.96496544187364 16.517041520221095 38-39 20.481418151646615 32.90834677503471 27.59633443625942 19.01390063705926 40-41 20.112351762763897 29.573122519005118 27.92532806835854 22.389197649872447 42-43 21.235499280978328 28.09376150283268 27.236352551433434 23.434386664755554 44-45 18.044886871007446 36.24124943558313 25.363464278047733 20.350399415361693 46-47 21.253870166959725 32.47582344300012 26.535600825545895 19.73470556449426 48-49 21.121270054042704 27.336753144416026 30.918066521449187 20.623910280092083 50-51 18.438649652399956 33.51603280380769 26.462218220554263 21.583099323238095 52-53 21.65008912907869 27.99837421023696 30.208062059948304 20.14347460073605 54-55 21.950146933441538 29.032022540336882 30.332788936016154 18.685041590205422 56-57 22.44966007131672 26.64498498365126 28.746735466644058 22.158619478387966 58-59 23.65042962974926 29.94366934558597 27.276526247151 19.129374777513767 60-61 23.736799710910894 33.103428088075276 25.015258602184183 18.144513598829647 62-63 22.44636273280724 29.606129550411257 29.6380262535438 18.309481463237702 64-65 17.904379874929933 35.61243352330041 28.77408991774823 17.709096684021432 66-67 16.69519873866708 32.82880689507129 24.084332460548016 26.391661905713615 68-69 16.63241472174164 36.91040727514002 22.77189079484027 23.68528720827807 70-71 18.302684908350813 33.687797223102635 27.05412412931758 20.955393739228974 72-73 21.6730695597111 34.09602791836328 24.69995901879281 19.530943503132807 74-75 20.90495791855843 35.85603281726621 22.412346312061462 20.826662952113896 76-77 26.57664932535781 31.057597774498387 23.82794756828014 18.537805331863662 78-79 18.331688028709724 32.628274879596674 28.679846599737424 20.360190491956175 80-81 15.116379226229048 31.52036914041077 30.524606556858565 22.838645076501617 82-83 18.23384455538755 29.07996853396965 31.045417809800096 21.640769100842704 84-85 16.030112102780063 29.637185095760763 28.279724665505196 26.052978135953975 86 17.33841527219529 28.95581364519426 30.8145031752024 22.891267907408043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 727.0 1 1088.0 2 6906.0 3 7454.5 4 3207.5 5 5625.0 6 9029.0 7 10677.0 8 11020.5 9 10315.5 10 8143.5 11 6088.5 12 4867.0 13 4538.0 14 4499.0 15 4569.5 16 4658.5 17 4662.0 18 4705.0 19 4820.0 20 5106.0 21 5335.0 22 5698.0 23 5922.0 24 6730.0 25 8108.5 26 8898.0 27 11421.0 28 15938.5 29 18291.0 30 19918.5 31 23127.0 32 23520.0 33 23622.5 34 25720.5 35 27303.5 36 28079.0 37 32416.0 38 40439.0 39 44394.0 40 51470.0 41 66007.0 42 80722.5 43 87708.0 44 87736.5 45 89802.0 46 93873.5 47 97169.0 48 90143.0 49 72734.0 50 63612.0 51 55136.5 52 42779.0 53 36654.5 54 32889.0 55 31046.5 56 30280.0 57 29833.0 58 27382.5 59 20335.0 60 13180.5 61 9825.5 62 8104.5 63 5882.5 64 4584.0 65 3789.0 66 2547.5 67 1749.0 68 1172.5 69 825.5 70 810.0 71 917.0 72 678.0 73 331.0 74 223.5 75 188.5 76 97.0 77 38.5 78 30.0 79 24.0 80 23.5 81 19.0 82 8.5 83 2.5 84 3.5 85 4.0 86 4.0 87 2.5 88 1.0 89 1.0 90 2.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1486047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.444550806032424 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53734450583096 15.852161791143002 2 9.166916811036726 3.7482699295582615 3 3.308995356006906 2.0295277101842557 4 1.7627123430425846 1.441514482150183 5 1.114424425002141 1.139195338821987 6 0.7775030498296229 0.953742036245213 7 0.5717252966191655 0.818206681167714 8 0.4138616144375193 0.6768971842427571 9 0.34283307017381953 0.6308161309041058 >10 2.8039879409766084 12.803017425532474 >50 0.9016994746238371 13.37024252370586 >100 1.2897053861015222 43.60608973339099 >500 0.005306064843821972 0.7923116200622804 >1k 0.002653032421910986 0.8960457274296677 >5k 0.0 0.0 >10k+ 3.316290527388732E-4 1.2419616854613085 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18318 1.2326662615650785 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGC 2254 0.15167757143616586 No Hit CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 2213 0.1489185739078239 No Hit CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG 2166 0.14575582064362702 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2051 0.13801716903974098 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1594835156626944 0.0 2 0.0 0.0 0.0 0.5043582067054406 0.0 3 0.0 0.0 0.0 0.7331531236898967 0.0 4 0.0 0.0 0.0 1.1085786654123322 0.0 5 0.0 0.0 0.0 2.0140681956896382 0.0 6 0.0 0.0 0.0 2.7640444750401567 0.0 7 0.0 0.0 0.0 3.313623324161349 0.0 8 0.0 0.0 0.0 4.22247748557078 0.0 9 0.0 0.0 0.0 4.532965646443214 0.0 10 0.0 0.0 0.0 5.0221157204314535 0.0 11 0.0 0.0 0.0 5.846786810915132 0.0 12 0.0 0.0 0.0 6.41978349271591 0.0 13 0.0 0.0 0.0 6.617623803284822 0.0 14 0.0 0.0 0.0 6.684243499700885 0.0 15 0.0 0.0 0.0 6.789691039381662 0.0 16 0.0 0.0 0.0 7.033088455479537 0.0 17 0.0 0.0 0.0 7.330185384446118 0.0 18 0.0 0.0 0.0 7.678357413998346 0.0 19 0.0 0.0 0.0 7.869333877057724 0.0 20 0.0 0.0 0.0 8.058762609796325 0.0 21 0.0 0.0 0.0 8.305255486535756 0.0 22 0.0 0.0 0.0 8.55538216489788 0.0 23 0.0 0.0 0.0 8.840501007034097 0.0 24 0.0 0.0 0.0 9.043590142169124 0.0 25 0.0 0.0 0.0 9.215859256133891 0.0 26 0.0 0.0 0.0 9.374198797211664 0.0 27 0.0 0.0 0.0 9.523251956364772 0.0 28 0.0 0.0 0.0 9.688993685933218 0.0 29 0.0 0.0 0.0 9.865233064633891 0.0 30 0.0 0.0 0.0 10.081780724297415 0.0 31 0.0 0.0 0.0 10.29435811922503 0.0 32 0.0 0.0 0.0 10.48264287737871 0.0 33 6.729262264248708E-5 0.0 0.0 10.669178027343685 0.0 34 6.729262264248708E-5 0.0 0.0 10.86008719778042 0.0 35 6.729262264248708E-5 0.0 0.0 11.07650027219866 0.0 36 6.729262264248708E-5 0.0 0.0 11.274004119654359 0.0 37 6.729262264248708E-5 0.0 0.0 11.480727056412078 0.0 38 6.729262264248708E-5 0.0 0.0 11.680249682547053 0.0 39 6.729262264248708E-5 0.0 0.0 11.897470268437 0.0 40 6.729262264248708E-5 0.0 0.0 12.102241719138089 0.0 41 6.729262264248708E-5 0.0 0.0 12.319731475518607 0.0 42 1.3458524528497416E-4 0.0 0.0 12.533452845031146 0.0 43 1.3458524528497416E-4 0.0 0.0 12.736340102298245 0.0 44 1.3458524528497416E-4 0.0 0.0 12.941919064471042 0.0 45 1.3458524528497416E-4 0.0 0.0 13.146892393040059 0.0 46 1.3458524528497416E-4 0.0 0.0 13.384300765722752 0.0 47 1.3458524528497416E-4 0.0 0.0 13.620632456443168 0.0 48 1.3458524528497416E-4 0.0 0.0 13.859252096333426 0.0 49 1.3458524528497416E-4 0.0 0.0 14.10931148207291 0.0 50 1.3458524528497416E-4 0.0 0.0 14.370003102189903 0.0 51 1.3458524528497416E-4 0.0 0.0 14.606873133891458 0.0 52 1.3458524528497416E-4 0.0 0.0 14.861979466329126 0.0 53 1.3458524528497416E-4 0.0 0.0 15.08848643414374 0.0 54 1.3458524528497416E-4 0.0 0.0 15.33504660350581 0.0 55 1.3458524528497416E-4 0.0 0.0 15.58288533269809 0.0 56 1.3458524528497416E-4 0.0 0.0 15.823591043890268 0.0 57 1.3458524528497416E-4 0.0 0.0 16.074121477988246 0.0 58 1.3458524528497416E-4 0.0 0.0 16.30365661382177 0.0 59 1.3458524528497416E-4 0.0 0.0 16.56259862575006 0.0 60 2.0187786792746126E-4 0.0 0.0 16.825376317168974 0.0 61 2.0187786792746126E-4 0.0 0.0 17.109822233078766 0.0 62 2.0187786792746126E-4 0.0 0.0 17.399247803064103 0.0 63 2.0187786792746126E-4 0.0 0.0 17.760474601408973 0.0 64 3.364631132124354E-4 0.0 0.0 18.073116126205967 0.0 65 3.364631132124354E-4 0.0 0.0 18.325194290624726 0.0 66 4.037557358549225E-4 0.0 0.0 18.55883427643944 0.0 67 4.037557358549225E-4 0.0 0.0 18.80418317859395 0.0 68 4.7104835849740955E-4 0.0 0.0 19.093945211692496 0.0 69 4.7104835849740955E-4 0.0 0.0 19.39279174884778 0.0 70 5.383409811398966E-4 0.0 0.0 19.637467724775863 0.0 71 5.383409811398966E-4 0.0 0.0 19.896880785062653 0.0 72 5.383409811398966E-4 0.0 0.0 20.158514501896644 0.0 73 5.383409811398966E-4 0.0 0.0 20.4338759137497 0.0 74 5.383409811398966E-4 0.0 0.0 20.715899295244363 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 30 4.0610757E-8 80.00001 1 GCGATAT 70 0.0 80.0 9 TAATGCG 25 1.2849905E-6 80.0 1 CGTTTTT 7505 0.0 74.45702 1 ACGATTG 85 0.0 70.58824 1 TATTACG 120 0.0 70.00001 1 GTCGACG 80 0.0 70.0 1 TATTGCG 150 0.0 69.333336 1 GTAGGGT 635 0.0 68.661415 4 GGCGATA 300 0.0 68.0 8 AGGGCGA 600 0.0 68.0 6 TTACGGG 515 0.0 67.572815 3 TAGGGTA 665 0.0 67.36842 5 TAGGGCG 275 0.0 66.90909 5 GTTACGG 90 0.0 66.66667 2 ACGGGAT 495 0.0 66.26262 5 TACGGGT 115 0.0 66.08696 4 GCGCGAC 55 9.094947E-12 65.454544 9 TAACGGG 410 0.0 65.36585 3 CGAGGGA 790 0.0 64.81013 4 >>END_MODULE