##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547257_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1294721 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39995180428834 31.0 31.0 33.0 30.0 34.0 2 31.82841863227676 31.0 31.0 34.0 30.0 34.0 3 31.95571941754247 33.0 31.0 34.0 30.0 34.0 4 35.62820329630863 37.0 35.0 37.0 33.0 37.0 5 35.49064084076801 37.0 35.0 37.0 33.0 37.0 6 35.55454186654885 37.0 35.0 37.0 33.0 37.0 7 35.99317922548565 37.0 35.0 37.0 35.0 37.0 8 35.99241072014743 37.0 35.0 37.0 35.0 37.0 9 37.66905534088039 39.0 37.0 39.0 35.0 39.0 10 37.08938605305699 39.0 37.0 39.0 33.0 39.0 11 36.876415845576 39.0 37.0 39.0 32.0 39.0 12 36.50566260993681 39.0 35.0 39.0 32.0 39.0 13 36.44507735643432 39.0 35.0 39.0 32.0 39.0 14 37.50042596049651 40.0 36.0 41.0 32.0 41.0 15 37.61707889190026 40.0 36.0 41.0 33.0 41.0 16 37.666906615402084 40.0 35.0 41.0 33.0 41.0 17 37.55750852886452 39.0 35.0 41.0 32.0 41.0 18 37.461305563129045 39.0 36.0 41.0 32.0 41.0 19 37.40416352248863 39.0 36.0 41.0 32.0 41.0 20 37.22493263027324 39.0 35.0 41.0 32.0 41.0 21 37.096382154919866 39.0 35.0 41.0 32.0 41.0 22 37.05806501941345 39.0 35.0 41.0 32.0 41.0 23 36.962270635913065 39.0 35.0 41.0 32.0 41.0 24 36.89297771488992 38.0 35.0 41.0 32.0 41.0 25 36.72300132615444 38.0 35.0 41.0 31.0 41.0 26 36.646448926062064 38.0 35.0 41.0 31.0 41.0 27 36.45959554220562 38.0 35.0 40.0 31.0 41.0 28 36.419220048180264 38.0 35.0 40.0 31.0 41.0 29 36.36620090351512 38.0 35.0 40.0 30.0 41.0 30 36.322328130925506 38.0 35.0 40.0 30.0 41.0 31 36.20055981172778 38.0 35.0 40.0 30.0 41.0 32 36.00872852143435 38.0 35.0 40.0 30.0 41.0 33 35.7992053886513 38.0 35.0 41.0 29.0 41.0 34 35.68245513898361 38.0 35.0 41.0 28.0 41.0 35 35.43677595404724 38.0 35.0 41.0 26.0 41.0 36 35.319372281750276 38.0 35.0 40.0 25.0 41.0 37 35.293966808293064 38.0 35.0 40.0 25.0 41.0 38 35.21237007818673 38.0 34.0 40.0 25.0 41.0 39 35.15274951128467 38.0 34.0 40.0 25.0 41.0 40 35.08646573277177 38.0 34.0 40.0 24.0 41.0 41 35.07987975787834 38.0 34.0 40.0 24.0 41.0 42 34.90038780555811 38.0 34.0 40.0 24.0 41.0 43 34.872230387859624 38.0 34.0 40.0 24.0 41.0 44 34.637223772534774 37.0 34.0 40.0 23.0 41.0 45 34.47028046969193 37.0 34.0 40.0 23.0 41.0 46 34.49495064959941 37.0 34.0 40.0 23.0 41.0 47 34.35998257539655 37.0 33.0 40.0 23.0 41.0 48 34.30854060450089 37.0 33.0 40.0 23.0 41.0 49 34.22082209217275 37.0 33.0 40.0 23.0 41.0 50 33.65015397139615 36.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 4.0 13 4.0 14 7.0 15 24.0 16 63.0 17 204.0 18 501.0 19 1008.0 20 1788.0 21 2964.0 22 4512.0 23 6766.0 24 10171.0 25 15503.0 26 22065.0 27 25875.0 28 26634.0 29 27652.0 30 31750.0 31 37661.0 32 45590.0 33 57914.0 34 89374.0 35 142682.0 36 97122.0 37 123140.0 38 186375.0 39 337364.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.47087287531445 25.40964423995594 28.01831437043193 15.101168514297674 2 32.83549119848987 26.53459702901243 26.941789003190646 13.688122769307054 3 28.240756116568743 25.10749420145344 32.81031202861466 13.841437653363156 4 24.16088099289345 28.070680864834973 32.33391595563832 15.43452218663326 5 22.19343009034379 31.75749833361782 31.329529682456688 14.719541893581706 6 19.18714533864825 40.177922502222486 28.973732564776505 11.66119959435276 7 84.51450157987705 3.484380032454869 9.743180190944614 2.257938196723464 8 83.84377792590064 2.8785352211016892 9.01924043867366 4.258446414324013 9 77.73759752101031 4.842973891672414 12.967890379471717 4.451538207845552 10 37.99544457840724 23.642236435494596 21.703285881668716 16.65903310442945 11 32.10985223843593 25.69101760147553 25.410030423542988 16.789099736545555 12 27.181995194331442 21.68814748505663 30.519625463709943 20.61023185690199 13 21.589361723491006 29.88497135676335 32.22068692791729 16.304979991828354 14 18.581918421034338 32.45602720586134 30.888585262770896 18.073469110333424 15 17.115424867596957 25.34414750359344 40.15436530341286 17.386062325396743 16 18.247020014350582 22.379493342581146 39.63131825312172 19.74216838994656 17 17.885474940160854 24.787734191381773 31.04344488117517 26.283345987282203 18 21.661578054268062 23.492319967004473 33.3683473118919 21.47775466683556 19 23.855332538824968 28.94546392620495 27.264252298371616 19.934951236598465 20 25.904190941523307 24.570776252180973 27.50507638325168 22.019956423044036 21 22.508324187218715 29.58969538611021 28.318533490999222 19.583446935671855 22 21.6995785192331 24.59711397281731 27.818966402800292 25.884341105149293 23 19.52969018035546 29.878792419370658 26.833194178514137 23.758323221759746 24 20.36871264156525 25.49159239712648 33.813539751035165 20.3261552102731 25 20.580881904286716 26.1569094808843 30.847649802544332 22.414558812284653 26 19.304081728804892 30.001984983637403 29.47553951778028 21.21839376977743 27 21.590365800817317 27.47340932911415 28.68741605334277 22.248808816725766 28 20.370489086065646 27.35739977956641 32.64919623610029 19.622914898267656 29 20.191531611829884 24.54698734321912 31.5627845690307 23.698696475920293 30 22.80529936565484 25.942423116640573 30.346537979997233 20.90573953770735 31 24.16412493502461 25.189674068776206 28.23728046428536 22.408920531913825 32 25.363842866532636 24.33945228354217 28.878731402363904 21.417973447561288 33 23.203918064200703 24.783872355511342 28.54738588468095 23.464823695607006 34 21.04407049858618 25.42323790221986 31.053176707568657 22.4795148916253 35 21.39356664486017 24.20544657883822 30.42253890992731 23.9784478663743 36 24.59317490022947 23.7597134826731 29.38285545688994 22.264256160207488 37 22.304728200129603 26.270679165627186 30.08462827126462 21.339964362978588 38 21.284971820183653 26.731473421686992 28.700932478889275 23.282622279240083 39 21.918930796673568 25.72994490704947 28.57851228179662 23.77261201448034 40 23.757937038172702 23.731135897231916 29.054831118055553 23.456095946539833 41 19.42480271811456 23.67266770215359 29.957805581279672 26.944723998452176 42 22.8147994818961 25.420611853827968 27.603475961230256 24.161112703045674 43 21.92789025589297 24.70879826619017 29.605992333483428 23.757319144433435 44 22.41000184595755 26.737806832514494 28.76604303166474 22.08614828986322 45 20.564121536609044 26.835434043318983 27.767912932593198 24.83253148747877 46 23.794624478941795 26.129181499334607 27.393701036748457 22.68249298497514 47 22.961549244972467 24.921894369520537 28.364412101139933 23.75214428436706 48 22.591353658432975 23.338387189209104 29.520954707616543 24.549304444741377 49 22.663492752492623 22.282175078646286 29.82704381870689 25.227288350154204 50 20.868125256329357 24.484193891965912 30.422075489622863 24.225605362081872 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 910.0 1 903.5 2 897.0 3 6551.0 4 12205.0 5 9053.5 6 5902.0 7 6392.0 8 6882.0 9 7329.5 10 7777.0 11 8179.0 12 8581.0 13 8453.0 14 8325.0 15 8137.5 16 7950.0 17 7748.5 18 7547.0 19 7250.5 20 6954.0 21 7026.5 22 7099.0 23 6961.5 24 6824.0 25 7545.5 26 8267.0 27 9242.0 28 10217.0 29 11791.5 30 13366.0 31 15956.5 32 18547.0 33 21079.0 34 23611.0 35 26728.5 36 29846.0 37 33563.0 38 37280.0 39 42429.5 40 47579.0 41 59788.5 42 71998.0 43 84827.0 44 97656.0 45 108512.5 46 119369.0 47 132378.5 48 145388.0 49 144174.0 50 142960.0 51 125108.5 52 107257.0 53 93841.5 54 80426.0 55 69818.5 56 59211.0 57 54257.5 58 49304.0 59 44571.5 60 39839.0 61 35348.0 62 30857.0 63 27337.0 64 23817.0 65 20164.0 66 16511.0 67 13670.5 68 10830.0 69 9373.5 70 7917.0 71 6976.5 72 6036.0 73 4932.5 74 3829.0 75 3151.5 76 2474.0 77 1920.5 78 1367.0 79 1023.0 80 679.0 81 461.5 82 244.0 83 173.5 84 103.0 85 82.0 86 61.0 87 37.0 88 13.0 89 8.5 90 4.0 91 2.5 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1294721.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.570149608246005 #Duplication Level Percentage of deduplicated Percentage of total 1 76.23166460385022 25.591083856368833 2 7.659418807226592 5.142556705416198 3 3.1039041051106744 3.1259557553464283 4 1.8385866259323047 2.4688651240107085 5 1.314471598910859 2.2063504115613943 6 1.0681821821656357 2.1515421398497847 7 0.8436590003703006 1.9825231202541986 8 0.7230724913221509 1.9418921369033413 9 0.6007119694028397 1.8149391615885684 >10 6.348439102826298 44.491296211743325 >50 0.22421196645792374 4.800037098189538 >100 0.03859338777546139 2.0660326343240705 >500 0.0025420793243292553 0.5915473837794868 >1k 0.002310981203935686 1.0642422309097703 >5k 2.3109812039356865E-4 0.5611360297543643 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7233 0.5586531770165155 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG 1819 0.1404935889662715 No Hit CTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 1742 0.1345463617258081 No Hit GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG 1563 0.12072098930966595 No Hit GAGAGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCT 1435 0.11083468948136317 No Hit AAGAGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCT 1409 0.10882653482873916 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1425017436188955 0.0 2 0.0 0.0 0.0 0.552319766189009 0.0 3 0.0 0.0 0.0 0.9242145605114924 0.0 4 0.0 0.0 0.0 1.4498104224771207 0.0 5 0.0 0.0 0.0 2.378195765728678 0.0 6 0.0 0.0 0.0 4.100188380353759 0.0 7 0.0 0.0 0.0 4.9235317879296 0.0 8 0.0 0.0 0.0 7.155672921038587 0.0 9 0.0 0.0 0.0 8.278231371855403 0.0 10 0.0 0.0 0.0 9.870929721538463 0.0 11 0.0 0.0 0.0 10.908450546488394 0.0 12 0.0 0.0 0.0 11.781920583662426 0.0 13 0.0 0.0 0.0 12.28094701483949 0.0 14 0.0 0.0 0.0 12.49968139854069 0.0 15 0.0 0.0 0.0 12.728302082070192 0.0 16 0.0 0.0 0.0 13.174344125104945 0.0 17 0.0 0.0 0.0 13.636296931925875 0.0 18 0.0 0.0 0.0 14.289101667463493 0.0 19 0.0 0.0 0.0 14.577503570267263 0.0 20 0.0 0.0 0.0 14.920357358844106 0.0 21 0.0 0.0 0.0 15.274410471445199 0.0 22 0.0 0.0 0.0 15.648776840724759 0.0 23 0.0 0.0 0.0 16.085087057366028 0.0 24 0.0 0.0 0.0 16.428635976399548 0.0 25 0.0 0.0 0.0 16.711013415245446 0.0 26 0.0 0.0 0.0 16.98319560739341 0.0 27 0.0 0.0 0.0 17.283260254525878 0.0 28 0.0 0.0 0.0 17.592593307747382 0.0 29 0.0 0.0 0.0 17.88833269870497 0.0 30 0.0 0.0 0.0 18.270113792855756 0.0 31 7.723671740861544E-5 0.0 0.0 18.59080064353633 0.0 32 7.723671740861544E-5 0.0 0.0 18.905308556824213 0.0 33 7.723671740861544E-5 0.0 0.0 19.20784477891376 0.0 34 1.5447343481723088E-4 0.0 0.0 19.491921425542646 0.0 35 1.5447343481723088E-4 0.0 0.0 19.82419378383451 0.0 36 1.5447343481723088E-4 0.0 0.0 20.12927881759854 0.0 37 1.5447343481723088E-4 0.0 0.0 20.45236000651878 0.0 38 1.5447343481723088E-4 0.0 0.0 20.769416731481144 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.856852E-4 44.0 1 TAATACG 45 4.802132E-10 44.0 1 TTGCGTA 20 7.856852E-4 44.0 16 CGTTTTT 7215 0.0 42.8413 1 CGCGACC 495 0.0 40.0 10 GCGTAAG 50 1.3478711E-9 39.6 1 TACGGGT 195 0.0 39.48718 4 TAGCCGT 45 2.3514076E-8 39.11111 44 GCGCGAC 505 0.0 38.772274 9 TAACGCG 40 4.125086E-7 38.5 1 AGCGCAG 80 0.0 38.5 1 TAGTACG 40 4.125086E-7 38.5 1 TAGGGTA 835 0.0 38.467068 5 TAGGGCG 695 0.0 38.30216 5 AATACGG 115 0.0 38.260868 2 AGGGCGC 415 0.0 38.168674 6 CACGACG 145 0.0 37.931034 26 TACGGGA 320 0.0 37.8125 4 AGGGCGA 1595 0.0 37.793102 6 ACAACGA 425 0.0 37.788235 13 >>END_MODULE